| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is nosX
Identifier: 110678860
GI number: 110678860
Start: 1476796
End: 1477698
Strand: Direct
Name: nosX
Synonym: RD1_1552
Alternate gene names: NA
Gene position: 1476796-1477698 (Clockwise)
Preceding gene: 110678859
Following gene: 110678862
Centisome position: 35.73
GC content: 66.22
Gene sequence:
>903_bases ATGACACAGCACGGCTTTTCAAGACGCAGGTTTCTGAACATCGCGGCGGCCCTGCCGCTTGCGGGGATGTCCGGGCGCGC GATGGCCGCGGCCCCGGCGGCGCGCTGGCACGGGGTGGCACTTGGTGCCTCCTCGCAGATCGTCCTGTCAGGGGTAAGCG ACGCCGAAGCCGCCCCTCTCTTCGCGCAGGTGCGCGATGAAATCGCACGGCTTGAAGGTATCTTCAGCCTTCATCAAAAC CACTCCGACCTCTCGCGCCTGAATGCGGCTGGCTGTCTGGATCATCCTGCGCCGGAACTGCTCGAAGTTCTGAGCCTGTC CCGGAGCGTCTGGCAGGCATCTTTTGGCGCGTTTGACCCCAGCGTCCAGCCACTGTGGCGCGCGCGCGCTGCGGGTGGCC TTCCGGCCACGCGCGCACAGACATTCAGCGATCTGACCTTTTCATCGCAGGCGGTTGCACTGCGACCGGGCATGGCGCTG ACCTTCAACGGGATCGCGCAGGGCTACATCACCGACCGCGTCGCGGGCCTGTTGCGCCGCGCCGGTCTCGTCGATCTGAT CGTGGATGCAGGCGAGCAGCGCGCATGGGGTGGGCGACCCGGCGGGGGTGCGTGGCGCGTGGGTATCTCAAACCCGGCAG GTGTTATCTTGCAAGAGGTCAGCCTGCGTGACCGCGCCCTTGCAACCTCCTCACCGCGCGGGACGCTGTTGCCGGACGGT GCGGGTCACATTATCGACGCGCGCAGCGGTAAGTCTGCCCAGCACTGGAACACGATCAGCCTGTTCCACGAAAGCGCAGC GCTTGCAGATGCCTTGTCCACGGCGGCCTGTTGCCTGACAGCGGCAGAGACCGACGCGATGCTGCGCCATTTCCCGGAAG CAGAACTCGCCCTGCGCGCCTAG
Upstream 100 bases:
>100_bases TTGCCAGCCGCTATGGAGGAGCGATCTACGAAAAACACGAGGTGCCGGAACAGTCCTTTCTGGCGCCGGTAGACCTGATG TTCGGGCAGGAGGAAAACGG
Downstream 100 bases:
>100_bases AGCGTCATGCGAGAAAAATGAAGTACGAAATACCGTCTGAAATTAATGATTCCAACGAGTTACGTGATACGCTCTAGTGC CTTCGGATCATCGCCCGCAA
Product: nitrous-oxide reductase protein nosX, putative
Products: NA
Alternate protein names: NosX Protein; ApbE Family; Twin-Arginine Translocation Pathway Signal; Nitrous-Oxide Reductase Protein NosX; Thiamine Biosynthesis Protein; Membrane-Associated Lipoprotein; NosX Accesory Protein; Thiamine Biosynthesis Lipoprotein; LOW QUALITY PROTEIN Thiamine Biosynthesis Protein; Periplasmic Protein
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTQHGFSRRRFLNIAAALPLAGMSGRAMAAAPAARWHGVALGASSQIVLSGVSDAEAAPLFAQVRDEIARLEGIFSLHQN HSDLSRLNAAGCLDHPAPELLEVLSLSRSVWQASFGAFDPSVQPLWRARAAGGLPATRAQTFSDLTFSSQAVALRPGMAL TFNGIAQGYITDRVAGLLRRAGLVDLIVDAGEQRAWGGRPGGGAWRVGISNPAGVILQEVSLRDRALATSSPRGTLLPDG AGHIIDARSGKSAQHWNTISLFHESAALADALSTAACCLTAAETDAMLRHFPEAELALRA
Sequences:
>Translated_300_residues MTQHGFSRRRFLNIAAALPLAGMSGRAMAAAPAARWHGVALGASSQIVLSGVSDAEAAPLFAQVRDEIARLEGIFSLHQN HSDLSRLNAAGCLDHPAPELLEVLSLSRSVWQASFGAFDPSVQPLWRARAAGGLPATRAQTFSDLTFSSQAVALRPGMAL TFNGIAQGYITDRVAGLLRRAGLVDLIVDAGEQRAWGGRPGGGAWRVGISNPAGVILQEVSLRDRALATSSPRGTLLPDG AGHIIDARSGKSAQHWNTISLFHESAALADALSTAACCLTAAETDAMLRHFPEAELALRA >Mature_299_residues TQHGFSRRRFLNIAAALPLAGMSGRAMAAAPAARWHGVALGASSQIVLSGVSDAEAAPLFAQVRDEIARLEGIFSLHQNH SDLSRLNAAGCLDHPAPELLEVLSLSRSVWQASFGAFDPSVQPLWRARAAGGLPATRAQTFSDLTFSSQAVALRPGMALT FNGIAQGYITDRVAGLLRRAGLVDLIVDAGEQRAWGGRPGGGAWRVGISNPAGVILQEVSLRDRALATSSPRGTLLPDGA GHIIDARSGKSAQHWNTISLFHESAALADALSTAACCLTAAETDAMLRHFPEAELALRA
Specific function: Unknown
COG id: COG1477
COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31496; Mature: 31365
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHGFSRRRFLNIAAALPLAGMSGRAMAAAPAARWHGVALGASSQIVLSGVSDAEAAPL CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCEEEECCCCEEEEECCCCCCHHHH FAQVRDEIARLEGIFSLHQNHSDLSRLNAAGCLDHPAPELLEVLSLSRSVWQASFGAFDP HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC SVQPLWRARAAGGLPATRAQTFSDLTFSSQAVALRPGMALTFNGIAQGYITDRVAGLLRR CHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHH AGLVDLIVDAGEQRAWGGRPGGGAWRVGISNPAGVILQEVSLRDRALATSSPRGTLLPDG CCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC AGHIIDARSGKSAQHWNTISLFHESAALADALSTAACCLTAAETDAMLRHFPEAELALRA CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECC >Mature Secondary Structure TQHGFSRRRFLNIAAALPLAGMSGRAMAAAPAARWHGVALGASSQIVLSGVSDAEAAPL CCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCEEEECCCCEEEEECCCCCCHHHH FAQVRDEIARLEGIFSLHQNHSDLSRLNAAGCLDHPAPELLEVLSLSRSVWQASFGAFDP HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC SVQPLWRARAAGGLPATRAQTFSDLTFSSQAVALRPGMALTFNGIAQGYITDRVAGLLRR CHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHH AGLVDLIVDAGEQRAWGGRPGGGAWRVGISNPAGVILQEVSLRDRALATSSPRGTLLPDG CCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC AGHIIDARSGKSAQHWNTISLFHESAALADALSTAACCLTAAETDAMLRHFPEAELALRA CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA