| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is marR [C]
Identifier: 110678842
GI number: 110678842
Start: 1454312
End: 1454779
Strand: Direct
Name: marR [C]
Synonym: RD1_1531
Alternate gene names: 110678842
Gene position: 1454312-1454779 (Clockwise)
Preceding gene: 110678840
Following gene: 110678843
Centisome position: 35.19
GC content: 60.04
Gene sequence:
>468_bases TTGCCAGTTTCCCGGGAACACAAGACCGCCCGCACGCAGCCCTATCGCCTTGATGAGCAGGTCGGCTACCTGCTGCGCCT TGCAACGCAACGCCATGCGCATATCCTGCAAGAGCACCTTCCCCATGAACTGACACCCACCCAATTCGCGGCCTTGATGC GACTGGCCGAGCTTGGCACCTGTTCGCAAAACGAGCTTGGCCGCCAGATCGCGGTCGATGCCGCCACGATCAAGGGCGTT GTTGACCGGTTGCGCAAGAAAGGCTTCGTGGAGACACACCCGGATGCGGGTGACAAACGCCGCCTGATGCTGTCGCTCGT GTCGGGGCTGGACGATATGATCGCAGCGCTGCATGAGACGGGATTTCACATTTCGGAAAGGACATTGGATCCCCTCGACC CGGACGAGCGTGCCGAATTCGTCCGCTTGCTGAAAAAGGCTGCATTTGCCGATCATTCAGGCGGGTGA
Upstream 100 bases:
>100_bases TTTTCCGTCGTCATAGGCACCTCTTGTAGGTATACTAACAATGCGCAGGCGGAGCGCAAGCCTTCCACCGCCGCACCTGC CCTGACGTCGGAGAGATCAT
Downstream 100 bases:
>100_bases AAACGCCGCCGGTTGACGGCCCCGCCGCCCCAAGGAAAAGTTTGACTCGCGTCAGAAAGTGCTATTATCGTTCGTATACA AATGACCAGCGTTAACGTCG
Product: multiple antibiotic resistance protein MarR
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator Protein; Multiple Antibiotic Resistance Protein MarR; MarR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator MarR; MarR Family Transcription Regulator Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGTCSQNELGRQIAVDAATIKGV VDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHETGFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG
Sequences:
>Translated_155_residues MPVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGTCSQNELGRQIAVDAATIKGV VDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHETGFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG >Mature_154_residues PVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGTCSQNELGRQIAVDAATIKGVV DRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHETGFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17380; Mature: 17249
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGT CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC CSQNELGRQIAVDAATIKGVVDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHET CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGT CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC CSQNELGRQIAVDAATIKGVVDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHET CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA