Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is marR [C]

Identifier: 110678842

GI number: 110678842

Start: 1454312

End: 1454779

Strand: Direct

Name: marR [C]

Synonym: RD1_1531

Alternate gene names: 110678842

Gene position: 1454312-1454779 (Clockwise)

Preceding gene: 110678840

Following gene: 110678843

Centisome position: 35.19

GC content: 60.04

Gene sequence:

>468_bases
TTGCCAGTTTCCCGGGAACACAAGACCGCCCGCACGCAGCCCTATCGCCTTGATGAGCAGGTCGGCTACCTGCTGCGCCT
TGCAACGCAACGCCATGCGCATATCCTGCAAGAGCACCTTCCCCATGAACTGACACCCACCCAATTCGCGGCCTTGATGC
GACTGGCCGAGCTTGGCACCTGTTCGCAAAACGAGCTTGGCCGCCAGATCGCGGTCGATGCCGCCACGATCAAGGGCGTT
GTTGACCGGTTGCGCAAGAAAGGCTTCGTGGAGACACACCCGGATGCGGGTGACAAACGCCGCCTGATGCTGTCGCTCGT
GTCGGGGCTGGACGATATGATCGCAGCGCTGCATGAGACGGGATTTCACATTTCGGAAAGGACATTGGATCCCCTCGACC
CGGACGAGCGTGCCGAATTCGTCCGCTTGCTGAAAAAGGCTGCATTTGCCGATCATTCAGGCGGGTGA

Upstream 100 bases:

>100_bases
TTTTCCGTCGTCATAGGCACCTCTTGTAGGTATACTAACAATGCGCAGGCGGAGCGCAAGCCTTCCACCGCCGCACCTGC
CCTGACGTCGGAGAGATCAT

Downstream 100 bases:

>100_bases
AAACGCCGCCGGTTGACGGCCCCGCCGCCCCAAGGAAAAGTTTGACTCGCGTCAGAAAGTGCTATTATCGTTCGTATACA
AATGACCAGCGTTAACGTCG

Product: multiple antibiotic resistance protein MarR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator Protein; Multiple Antibiotic Resistance Protein MarR; MarR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator MarR; MarR Family Transcription Regulator Protein

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGTCSQNELGRQIAVDAATIKGV
VDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHETGFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG

Sequences:

>Translated_155_residues
MPVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGTCSQNELGRQIAVDAATIKGV
VDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHETGFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG
>Mature_154_residues
PVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGTCSQNELGRQIAVDAATIKGVV
DRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHETGFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17380; Mature: 17249

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGT
CCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
CSQNELGRQIAVDAATIKGVVDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PVSREHKTARTQPYRLDEQVGYLLRLATQRHAHILQEHLPHELTPTQFAALMRLAELGT
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
CSQNELGRQIAVDAATIKGVVDRLRKKGFVETHPDAGDKRRLMLSLVSGLDDMIAALHET
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GFHISERTLDPLDPDERAEFVRLLKKAAFADHSGG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA