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The map label for this gene is soxA

Identifier: 110678826

GI number: 110678826

Start: 1435984

End: 1436829

Strand: Direct

Name: soxA

Synonym: RD1_1514

Alternate gene names: NA

Gene position: 1435984-1436829 (Clockwise)

Preceding gene: 110678825

Following gene: 110678827

Centisome position: 34.74

GC content: 58.75

Gene sequence:

>846_bases
ATGCGGAGAATAACAAGCGCTGTGCTGGCGACGTTTTTGACAATACCGGGCGCTTTCGCTGAACCGGTGGACGATCAACT
GGTGGTAAACGAAGACATTTCCATCGTGACGCGCACCGCGGCACCGGCGCATGTGTCGGACGCGCTGGATGAAGTCATGT
CAGGGTGGCTGTTTCGTGGCACTGAAACACGCGCCATGCAGGCGGATGATTTCGACAACCCCGGCATGATCTTTGTCGAA
CAGGCGCTGGAGGTCTGGGAGACGGCAGAGGGCACGGAAGGTAAATCCTGTGCGGCCTGTCACAATGACATCGACAGCAT
GGCCGGCGTCAAAGCGACGTATCCAAAATGGAATGAAGCCGCCGGCGAAGTACGCACCTTGCAGATGCAGGTGAACGATT
GCCGCACCAACCGCATGGGGGCCGAGGCGTGGAAATACGACAGCGGTGATGCGATCAACATGGAAGCGGCCCTTGCGTCG
GTGTCGCGTGGCATGCCGGTGAACGTTGCGATTGACGGTCCCGCGCAATCCGCCTGGGAACTTGGTAAGGAGCTCTATTA
CACCCGCACCGGCCAGTTGGAGTTGTCCTGTTCGAACTGCCATGAGGACAACTATGGCATGATGATCCGGGCGGATCACC
TGAGCCAGGGCCAAATCAACGGCTTTCCGGTCTACCGGTTGAAAAACACCAAGCTGAACGGGGTACACTCGCGCTTCAAG
GGGTGCGTTCGCGATACCCGCGCGGAAACATACAGCCCCGGCAGTGCCGAGTTCGTGGCACTGGAGCTTTATGTCGCCTC
ACGCGGCAATGGCCTGAGCGTCGAAGGACCTTCCGTTCGAAACTGA

Upstream 100 bases:

>100_bases
GAGTTCAAATTCACATGGTACGATGACGACGGCTCCGTCTACGAGACATCCAAATCAATCGCGATCAGCGGATAAGCGCA
TCATTCTTGGGAGGGATACC

Downstream 100 bases:

>100_bases
ACAAAAAAAAAGCCCCGCCCGAGAGATCGGCGCGGGGTTTTCTGGCACATGACTAATTCAATAAACCGCATATGTTTTTG
CGACTGGGAGTTTCGGGATG

Product: diheme cytochrome c SoxA

Products: NA

Alternate protein names: Diheme Cytochrome C; Sulfur Oxidation Protein SoxA; Sulfur Oxidation Protein; Diheme Cytochrome C SoxA; Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Secreted Protein-Like Protein; Chain G Soxax Complex; Sulfur Oxidation Diheme Cytochrome SoxA; Sulfur Oxidation

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRRITSAVLATFLTIPGAFAEPVDDQLVVNEDISIVTRTAAPAHVSDALDEVMSGWLFRGTETRAMQADDFDNPGMIFVE
QALEVWETAEGTEGKSCAACHNDIDSMAGVKATYPKWNEAAGEVRTLQMQVNDCRTNRMGAEAWKYDSGDAINMEAALAS
VSRGMPVNVAIDGPAQSAWELGKELYYTRTGQLELSCSNCHEDNYGMMIRADHLSQGQINGFPVYRLKNTKLNGVHSRFK
GCVRDTRAETYSPGSAEFVALELYVASRGNGLSVEGPSVRN

Sequences:

>Translated_281_residues
MRRITSAVLATFLTIPGAFAEPVDDQLVVNEDISIVTRTAAPAHVSDALDEVMSGWLFRGTETRAMQADDFDNPGMIFVE
QALEVWETAEGTEGKSCAACHNDIDSMAGVKATYPKWNEAAGEVRTLQMQVNDCRTNRMGAEAWKYDSGDAINMEAALAS
VSRGMPVNVAIDGPAQSAWELGKELYYTRTGQLELSCSNCHEDNYGMMIRADHLSQGQINGFPVYRLKNTKLNGVHSRFK
GCVRDTRAETYSPGSAEFVALELYVASRGNGLSVEGPSVRN
>Mature_281_residues
MRRITSAVLATFLTIPGAFAEPVDDQLVVNEDISIVTRTAAPAHVSDALDEVMSGWLFRGTETRAMQADDFDNPGMIFVE
QALEVWETAEGTEGKSCAACHNDIDSMAGVKATYPKWNEAAGEVRTLQMQVNDCRTNRMGAEAWKYDSGDAINMEAALAS
VSRGMPVNVAIDGPAQSAWELGKELYYTRTGQLELSCSNCHEDNYGMMIRADHLSQGQINGFPVYRLKNTKLNGVHSRFK
GCVRDTRAETYSPGSAEFVALELYVASRGNGLSVEGPSVRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30674; Mature: 30674

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRITSAVLATFLTIPGAFAEPVDDQLVVNEDISIVTRTAAPAHVSDALDEVMSGWLFRG
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCEEECC
TETRAMQADDFDNPGMIFVEQALEVWETAEGTEGKSCAACHNDIDSMAGVKATYPKWNEA
CCCCEEECCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCC
AGEVRTLQMQVNDCRTNRMGAEAWKYDSGDAINMEAALASVSRGMPVNVAIDGPAQSAWE
CCCEEEEEEEECHHHCCCCCCHHEECCCCCEEEHHHHHHHHHCCCEEEEEECCCCHHHHH
LGKELYYTRTGQLELSCSNCHEDNYGMMIRADHLSQGQINGFPVYRLKNTKLNGVHSRFK
HHHHHEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHH
GCVRDTRAETYSPGSAEFVALELYVASRGNGLSVEGPSVRN
HHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCC
>Mature Secondary Structure
MRRITSAVLATFLTIPGAFAEPVDDQLVVNEDISIVTRTAAPAHVSDALDEVMSGWLFRG
CCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCEEECC
TETRAMQADDFDNPGMIFVEQALEVWETAEGTEGKSCAACHNDIDSMAGVKATYPKWNEA
CCCCEEECCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCC
AGEVRTLQMQVNDCRTNRMGAEAWKYDSGDAINMEAALASVSRGMPVNVAIDGPAQSAWE
CCCEEEEEEEECHHHCCCCCCHHEECCCCCEEEHHHHHHHHHCCCEEEEEECCCCHHHHH
LGKELYYTRTGQLELSCSNCHEDNYGMMIRADHLSQGQINGFPVYRLKNTKLNGVHSRFK
HHHHHEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHH
GCVRDTRAETYSPGSAEFVALELYVASRGNGLSVEGPSVRN
HHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA