Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is soxZ

Identifier: 110678825

GI number: 110678825

Start: 1435626

End: 1435958

Strand: Direct

Name: soxZ

Synonym: RD1_1513

Alternate gene names: NA

Gene position: 1435626-1435958 (Clockwise)

Preceding gene: 110678824

Following gene: 110678826

Centisome position: 34.73

GC content: 51.35

Gene sequence:

>333_bases
ATGGCGTCAGGTGTAAAACCCCGCGTGAAAGTACCCAAAACGGCGGCGGTCGGTGACACGATCACCATCAAGACGCTGAT
CAGCCACAAGATGGAATCCGGTCAGCGTAAAGACAAAGAAGGTAATGTCATCCCGCGTTCGATCATCAACCGCTTCACCT
GCGATTTTAACGGTGAAAACGTGGTGGACGTAAAGATGGAACCTGCGATTTCCACCAACCCCTATTTTGAGTTCGAAGCA
AAGGTCCCCGAGGCCGGTGAGTTCAAATTCACATGGTACGATGACGACGGCTCCGTCTACGAGACATCCAAATCAATCGC
GATCAGCGGATAA

Upstream 100 bases:

>100_bases
CAATCGCCAAGCTTGAGGATGGGTCGTTCGTGCAAGCCTCCAGCACGGTCAAGGTAACAATCGGCGGCTGCGGCGGCTAA
AGCGATCAAGGAGATTTAAC

Downstream 100 bases:

>100_bases
GCGCATCATTCTTGGGAGGGATACCATGCGGAGAATAACAAGCGCTGTGCTGGCGACGTTTTTGACAATACCGGGCGCTT
TCGCTGAACCGGTGGACGAT

Product: sulfur oxidation Z protein

Products: NA

Alternate protein names: Sulphur Oxidation Protein SoxZ; Sulfur Oxidation Z Protein; Sulfur Oxidation Protein; Sulfur Compound Chelating Protein SoxZ; Sulphur Oxidation Protein; Chain E Soxyz Complex

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MASGVKPRVKVPKTAAVGDTITIKTLISHKMESGQRKDKEGNVIPRSIINRFTCDFNGENVVDVKMEPAISTNPYFEFEA
KVPEAGEFKFTWYDDDGSVYETSKSIAISG

Sequences:

>Translated_110_residues
MASGVKPRVKVPKTAAVGDTITIKTLISHKMESGQRKDKEGNVIPRSIINRFTCDFNGENVVDVKMEPAISTNPYFEFEA
KVPEAGEFKFTWYDDDGSVYETSKSIAISG
>Mature_109_residues
ASGVKPRVKVPKTAAVGDTITIKTLISHKMESGQRKDKEGNVIPRSIINRFTCDFNGENVVDVKMEPAISTNPYFEFEAK
VPEAGEFKFTWYDDDGSVYETSKSIAISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12164; Mature: 12033

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGVKPRVKVPKTAAVGDTITIKTLISHKMESGQRKDKEGNVIPRSIINRFTCDFNGEN
CCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCCCCE
VVDVKMEPAISTNPYFEFEAKVPEAGEFKFTWYDDDGSVYETSKSIAISG
EEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCEEEECC
>Mature Secondary Structure 
ASGVKPRVKVPKTAAVGDTITIKTLISHKMESGQRKDKEGNVIPRSIINRFTCDFNGEN
CCCCCCCEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCCCCE
VVDVKMEPAISTNPYFEFEAKVPEAGEFKFTWYDDDGSVYETSKSIAISG
EEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA