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The map label for this gene is soxW

Identifier: 110678822

GI number: 110678822

Start: 1433984

End: 1434547

Strand: Direct

Name: soxW

Synonym: RD1_1510

Alternate gene names: NA

Gene position: 1433984-1434547 (Clockwise)

Preceding gene: 110678821

Following gene: 110678823

Centisome position: 34.7

GC content: 54.08

Gene sequence:

>564_bases
ATGAGAAAACTGTTCACTGCATGTGTTGCACTGGTCATAATGGCCACGGGGGCTGTGGCTGCAAATCTGGGGGATGACGG
GCTGCACAAAGCGCCGTGGATGCGCGATACGTTCAAGGACCTGTCGGAGGACCTTGCCGAGGCGAATGCCGAGGGCAAAC
GCCTGATGGTCATCATCGAACAGCGTGGCTGCATCTATTGTACCAAGATGCATGAAGAGGTGTTTCCGATTGATGAAATC
GCCGCCTATATCGAGGAAAACTACTTTGTCGTGCAGATCAACATGTTCGGTGACATCGAGGTGACAGACTTTGACGGCGA
GGCCTTGCCGGAGAAGGAAATGGTCAGGAAATGGGGCGCATTATTCACGCCCATGATCCTGTTTTTCCCGACGGAGGTCG
AGGATGGCGTTTCTGCGGGCAAGGCCGCCGTTGCAACAATGCCCGGTGCCTTTGGGCGTTACACGACCTTTAACATGCTG
AACTGGGTCGTGGAGGAAGGCTATGACGCAGACGAAGGTTTCCAGCGATATCATGCGCGCAAATTCGCAGAGCAGTCGAA
ATAA

Upstream 100 bases:

>100_bases
TGGCCTGCTGATCGCGACAAACTCAATGAATTACATCGCACTGCTGATGCTGGAGGTCTTTCCAAACTTTGGCGTGCTTG
GATAAAGGGGAGGAAACCTC

Downstream 100 bases:

>100_bases
AGCGCAAAAACAAGCGGTTCCGACGTATCACATAATAAAATTCAATTAGTTGAATTTGTTGTTGCGTCAACGCGATCCTG
TGCGCTACGGTATACGAAAT

Product: thioredoxin SoxW

Products: NA

Alternate protein names: Thioredoxin; Thioredoxin-Like Protein; Cytochrome C Biogenesis Protein Transmembrane Region; Thioredoxin SoxW Protein; Thioredoxin-Related Protein-Like Protein; Twin-Arginine Translocation Pathway Signal; Thioredoxin-Related Protein; ShxW Protein; Thioredoxin-Like Protein-Like Protein

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKLFTACVALVIMATGAVAANLGDDGLHKAPWMRDTFKDLSEDLAEANAEGKRLMVIIEQRGCIYCTKMHEEVFPIDEI
AAYIEENYFVVQINMFGDIEVTDFDGEALPEKEMVRKWGALFTPMILFFPTEVEDGVSAGKAAVATMPGAFGRYTTFNML
NWVVEEGYDADEGFQRYHARKFAEQSK

Sequences:

>Translated_187_residues
MRKLFTACVALVIMATGAVAANLGDDGLHKAPWMRDTFKDLSEDLAEANAEGKRLMVIIEQRGCIYCTKMHEEVFPIDEI
AAYIEENYFVVQINMFGDIEVTDFDGEALPEKEMVRKWGALFTPMILFFPTEVEDGVSAGKAAVATMPGAFGRYTTFNML
NWVVEEGYDADEGFQRYHARKFAEQSK
>Mature_187_residues
MRKLFTACVALVIMATGAVAANLGDDGLHKAPWMRDTFKDLSEDLAEANAEGKRLMVIIEQRGCIYCTKMHEEVFPIDEI
AAYIEENYFVVQINMFGDIEVTDFDGEALPEKEMVRKWGALFTPMILFFPTEVEDGVSAGKAAVATMPGAFGRYTTFNML
NWVVEEGYDADEGFQRYHARKFAEQSK

Specific function: Unknown

COG id: COG2143

COG function: function code O; Thioredoxin-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21046; Mature: 21046

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLFTACVALVIMATGAVAANLGDDGLHKAPWMRDTFKDLSEDLAEANAEGKRLMVIIE
CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
QRGCIYCTKMHEEVFPIDEIAAYIEENYFVVQINMFGDIEVTDFDGEALPEKEMVRKWGA
CCCCEEEEEHHHHCCCHHHHHHHHHCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHH
LFTPMILFFPTEVEDGVSAGKAAVATMPGAFGRYTTFNMLNWVVEEGYDADEGFQRYHAR
HHHHHHHHCCCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KFAEQSK
HHHHHCC
>Mature Secondary Structure
MRKLFTACVALVIMATGAVAANLGDDGLHKAPWMRDTFKDLSEDLAEANAEGKRLMVIIE
CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
QRGCIYCTKMHEEVFPIDEIAAYIEENYFVVQINMFGDIEVTDFDGEALPEKEMVRKWGA
CCCCEEEEEHHHHCCCHHHHHHHHHCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHH
LFTPMILFFPTEVEDGVSAGKAAVATMPGAFGRYTTFNMLNWVVEEGYDADEGFQRYHAR
HHHHHHHHCCCCHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KFAEQSK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA