Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is iaaM [H]

Identifier: 110678807

GI number: 110678807

Start: 1420300

End: 1421949

Strand: Reverse

Name: iaaM [H]

Synonym: RD1_1495

Alternate gene names: 110678807

Gene position: 1421949-1420300 (Counterclockwise)

Preceding gene: 110678808

Following gene: 110678806

Centisome position: 34.4

GC content: 60.85

Gene sequence:

>1650_bases
ATGAAGCCTGTCACCGTCTTTGGACCCGACTTTCCCTTTGCCTATGACGACTGGATCGCGCATCCCGACGGGCTGGCCAC
TTTGCCTGCCGCAGCGCACGGCGCGCACGTCGCCATCATCGGCGCGGGTGCTGCTGGGGTAATCGCGGGCTATGAGTTGA
TGAAGCTTGGCCTGTGCCCGATCCTGTTTGAACCCGGTCAATTCGGCGGGCGCCTGCGCTCGCAACCTTTCGAAGGTGCC
GAAGGCGTCATCGCGGAATTAGGCGGCATGCGGTTTCCCGTCTCCAGCACCGGGTTCTACCATTATGTTGATCTGCTCGG
CATTCAAAGCAAACCCTTCCCCAACCCGCTGACCCCCGCTGCGGGATCAACGGTGATCGACCTGCTGGGCAAGACCTATT
ACGCGCAGACCTTGCAGGACTTGCCACCGCTCTTTCATGAGGTCGCGCAGGCCTATGACGCCGCACTGGAACAGGAGGCC
AATTTCAGCGCCCTGAAACAGGCGATACGTGACCGCGACATCCCGCGTATCAAGGAAATCTGGAACCCGATTGTCACCGC
ATGGGACGAGCGTACCTTTTATGACTTCGTGGCCTCCTCCGAGGCATTCAAGAAGCTTACTTTTCACCACCGCGAGGTGT
TCGGGCAGGTCGGTTTCGGCACGGGCGGCTGGGACAGTGATTTTCCCAATTCCATGCTGGAGATCCTGCGCGTCAACGTC
ACCGAATGTGACGATCACCAACGCTATATGGTTGGTGGGGTGGAACAGGTGCCGCGCAAGCTCTGGCAGCATAAACCCGA
CCGCCTTGTCCACTGGCCCGCCGGCACATCGCTGCGATCGCTCAATGACGGGGCGACGCGCTCGGGCGCCAAGCGCATCC
GGCGGCTGGACGCTGGCCAGATCGAGGTCACGGATGCCTGGGGGCGTGCGGAAGGGTTTGACGCCGTGCTCGTCACCTGT
CAGACGCATCTGCTAAGCACGCAGATCGACACCGAAGAATCCCTGTTTTCGCAAGACCTGTGGATGGCGCTGGACCGGAC
CCGCTACATGCAATCGGCCAAGACCTTCGTGATGGTGGATCGCCCCTTCTGGAAAGACAAACACCCCGTCACGGGCCGTG
ATACGATGTCGATGACCCTCACGGACCGGATGACGCGGGGCACCTATCTGTTTGACAACGGGCCGGACAAACCCTCGGTG
ATCTGCCTCAGCTACGCTTGGATGACCGACGCGCTCAAGGTGCTGCCCCTGCCGGTTGAGCAACGCGTGGAACTGGCCCT
CGCGGCCTTGGCGAAAATCTATCCCGACGTGGATATCCGCAGCCATATTCTGGGCGATCCGATCACCGTCAGTTGGGAGG
CGGATCAGAATTTCCTTGGCGCTTTCAAAGGCGCTTTGCCCGGCCACTACCGCTATAATCACCGCATGTTCGGGCATTTC
GTACAAAGCGACATGCCCGCGCGCGAACGCGGTATTTTCCTCGCCGGAGATGGCGTTAGCTGGACGCCTGCATGGGTCGA
GGGGGCTGTGCAAACCTCGCTCAATGCCGTGGCCGGGATCATCGCCCATTTCGGCGGCACCCCCTCGCCTGCCAATCCTT
CACCGCTGGAGGCCTATGAAAAACACGGACCCGTGAGGTTGAGCGCATGA

Upstream 100 bases:

>100_bases
CGATGCTCTTTGCGACCCTCGACCGGGCGGACCTCGCGCGTGCACGGCAATCGCAAACCCATCTGCAGGATCGTCGCCCT
GACCTTTATGGAGACATCAC

Downstream 100 bases:

>100_bases
CCCGCATACCGGCGCACTGTCCTTTTGCCATGGACGCGGTAATCTGGTCACGATCCATAACGCACCCACAACGATCAGCA
TGTCACCGAAGCGGAGGCCA

Product: tryptophan monooxygenase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCPILFEPGQFGGRLRSQPFEGA
EGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPAAGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEA
NFSALKQAIRDRDIPRIKEIWNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV
TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQIEVTDAWGRAEGFDAVLVTC
QTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVDRPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSV
ICLSYAWMTDALKVLPLPVEQRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF
VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYEKHGPVRLSA

Sequences:

>Translated_549_residues
MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCPILFEPGQFGGRLRSQPFEGA
EGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPAAGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEA
NFSALKQAIRDRDIPRIKEIWNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV
TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQIEVTDAWGRAEGFDAVLVTC
QTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVDRPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSV
ICLSYAWMTDALKVLPLPVEQRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF
VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYEKHGPVRLSA
>Mature_549_residues
MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCPILFEPGQFGGRLRSQPFEGA
EGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPAAGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEA
NFSALKQAIRDRDIPRIKEIWNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV
TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQIEVTDAWGRAEGFDAVLVTC
QTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVDRPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSV
ICLSYAWMTDALKVLPLPVEQRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF
VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYEKHGPVRLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tryptophan 2-monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: =1.13.12.3 [H]

Molecular weight: Translated: 60718; Mature: 60718

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCEEECC
>Mature Secondary Structure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CCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA