| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is iaaM [H]
Identifier: 110678807
GI number: 110678807
Start: 1420300
End: 1421949
Strand: Reverse
Name: iaaM [H]
Synonym: RD1_1495
Alternate gene names: 110678807
Gene position: 1421949-1420300 (Counterclockwise)
Preceding gene: 110678808
Following gene: 110678806
Centisome position: 34.4
GC content: 60.85
Gene sequence:
>1650_bases ATGAAGCCTGTCACCGTCTTTGGACCCGACTTTCCCTTTGCCTATGACGACTGGATCGCGCATCCCGACGGGCTGGCCAC TTTGCCTGCCGCAGCGCACGGCGCGCACGTCGCCATCATCGGCGCGGGTGCTGCTGGGGTAATCGCGGGCTATGAGTTGA TGAAGCTTGGCCTGTGCCCGATCCTGTTTGAACCCGGTCAATTCGGCGGGCGCCTGCGCTCGCAACCTTTCGAAGGTGCC GAAGGCGTCATCGCGGAATTAGGCGGCATGCGGTTTCCCGTCTCCAGCACCGGGTTCTACCATTATGTTGATCTGCTCGG CATTCAAAGCAAACCCTTCCCCAACCCGCTGACCCCCGCTGCGGGATCAACGGTGATCGACCTGCTGGGCAAGACCTATT ACGCGCAGACCTTGCAGGACTTGCCACCGCTCTTTCATGAGGTCGCGCAGGCCTATGACGCCGCACTGGAACAGGAGGCC AATTTCAGCGCCCTGAAACAGGCGATACGTGACCGCGACATCCCGCGTATCAAGGAAATCTGGAACCCGATTGTCACCGC ATGGGACGAGCGTACCTTTTATGACTTCGTGGCCTCCTCCGAGGCATTCAAGAAGCTTACTTTTCACCACCGCGAGGTGT TCGGGCAGGTCGGTTTCGGCACGGGCGGCTGGGACAGTGATTTTCCCAATTCCATGCTGGAGATCCTGCGCGTCAACGTC ACCGAATGTGACGATCACCAACGCTATATGGTTGGTGGGGTGGAACAGGTGCCGCGCAAGCTCTGGCAGCATAAACCCGA CCGCCTTGTCCACTGGCCCGCCGGCACATCGCTGCGATCGCTCAATGACGGGGCGACGCGCTCGGGCGCCAAGCGCATCC GGCGGCTGGACGCTGGCCAGATCGAGGTCACGGATGCCTGGGGGCGTGCGGAAGGGTTTGACGCCGTGCTCGTCACCTGT CAGACGCATCTGCTAAGCACGCAGATCGACACCGAAGAATCCCTGTTTTCGCAAGACCTGTGGATGGCGCTGGACCGGAC CCGCTACATGCAATCGGCCAAGACCTTCGTGATGGTGGATCGCCCCTTCTGGAAAGACAAACACCCCGTCACGGGCCGTG ATACGATGTCGATGACCCTCACGGACCGGATGACGCGGGGCACCTATCTGTTTGACAACGGGCCGGACAAACCCTCGGTG ATCTGCCTCAGCTACGCTTGGATGACCGACGCGCTCAAGGTGCTGCCCCTGCCGGTTGAGCAACGCGTGGAACTGGCCCT CGCGGCCTTGGCGAAAATCTATCCCGACGTGGATATCCGCAGCCATATTCTGGGCGATCCGATCACCGTCAGTTGGGAGG CGGATCAGAATTTCCTTGGCGCTTTCAAAGGCGCTTTGCCCGGCCACTACCGCTATAATCACCGCATGTTCGGGCATTTC GTACAAAGCGACATGCCCGCGCGCGAACGCGGTATTTTCCTCGCCGGAGATGGCGTTAGCTGGACGCCTGCATGGGTCGA GGGGGCTGTGCAAACCTCGCTCAATGCCGTGGCCGGGATCATCGCCCATTTCGGCGGCACCCCCTCGCCTGCCAATCCTT CACCGCTGGAGGCCTATGAAAAACACGGACCCGTGAGGTTGAGCGCATGA
Upstream 100 bases:
>100_bases CGATGCTCTTTGCGACCCTCGACCGGGCGGACCTCGCGCGTGCACGGCAATCGCAAACCCATCTGCAGGATCGTCGCCCT GACCTTTATGGAGACATCAC
Downstream 100 bases:
>100_bases CCCGCATACCGGCGCACTGTCCTTTTGCCATGGACGCGGTAATCTGGTCACGATCCATAACGCACCCACAACGATCAGCA TGTCACCGAAGCGGAGGCCA
Product: tryptophan monooxygenase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCPILFEPGQFGGRLRSQPFEGA EGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPAAGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEA NFSALKQAIRDRDIPRIKEIWNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQIEVTDAWGRAEGFDAVLVTC QTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVDRPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSV ICLSYAWMTDALKVLPLPVEQRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYEKHGPVRLSA
Sequences:
>Translated_549_residues MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCPILFEPGQFGGRLRSQPFEGA EGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPAAGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEA NFSALKQAIRDRDIPRIKEIWNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQIEVTDAWGRAEGFDAVLVTC QTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVDRPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSV ICLSYAWMTDALKVLPLPVEQRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYEKHGPVRLSA >Mature_549_residues MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCPILFEPGQFGGRLRSQPFEGA EGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPAAGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEA NFSALKQAIRDRDIPRIKEIWNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQIEVTDAWGRAEGFDAVLVTC QTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVDRPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSV ICLSYAWMTDALKVLPLPVEQRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYEKHGPVRLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tryptophan 2-monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002937 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: =1.13.12.3 [H]
Molecular weight: Translated: 60718; Mature: 60718
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCP CCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC ILFEPGQFGGRLRSQPFEGAEGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPA EEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC AGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEANFSALKQAIRDRDIPRIKEI CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHH WNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQ CCCCCCCHHHHCCHHHHHHHHHCCCCCCEEECCCCCCHHCCCCCCCHHHHHHHHHCCCCC IEVTDAWGRAEGFDAVLVTCQTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVD EEEEECCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE RPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSVICLSYAWMTDALKVLPLPVE CCCCCCCCCCCCCCCEEEEEHHHHCCCEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCHH QRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF HHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCEECCHHHHHHH VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYE HHCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH KHGPVRLSA CCCCEEECC >Mature Secondary Structure MKPVTVFGPDFPFAYDDWIAHPDGLATLPAAAHGAHVAIIGAGAAGVIAGYELMKLGLCP CCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC ILFEPGQFGGRLRSQPFEGAEGVIAELGGMRFPVSSTGFYHYVDLLGIQSKPFPNPLTPA EEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC AGSTVIDLLGKTYYAQTLQDLPPLFHEVAQAYDAALEQEANFSALKQAIRDRDIPRIKEI CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHH WNPIVTAWDERTFYDFVASSEAFKKLTFHHREVFGQVGFGTGGWDSDFPNSMLEILRVNV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC TECDDHQRYMVGGVEQVPRKLWQHKPDRLVHWPAGTSLRSLNDGATRSGAKRIRRLDAGQ CCCCCCCHHHHCCHHHHHHHHHCCCCCCEEECCCCCCHHCCCCCCCHHHHHHHHHCCCCC IEVTDAWGRAEGFDAVLVTCQTHLLSTQIDTEESLFSQDLWMALDRTRYMQSAKTFVMVD EEEEECCCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE RPFWKDKHPVTGRDTMSMTLTDRMTRGTYLFDNGPDKPSVICLSYAWMTDALKVLPLPVE CCCCCCCCCCCCCCCEEEEEHHHHCCCEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCHH QRVELALAALAKIYPDVDIRSHILGDPITVSWEADQNFLGAFKGALPGHYRYNHRMFGHF HHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCEECCHHHHHHH VQSDMPARERGIFLAGDGVSWTPAWVEGAVQTSLNAVAGIIAHFGGTPSPANPSPLEAYE HHCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH KHGPVRLSA CCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA