| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mtlK [H]
Identifier: 110678793
GI number: 110678793
Start: 1405379
End: 1406860
Strand: Reverse
Name: mtlK [H]
Synonym: RD1_1481
Alternate gene names: 110678793
Gene position: 1406860-1405379 (Counterclockwise)
Preceding gene: 110678794
Following gene: 110678792
Centisome position: 34.04
GC content: 58.23
Gene sequence:
>1482_bases ATGGATGAACTGATCGCCCTTTCAAATGCGACGCTGGATCGACTGCGCGTTGAACGTCCAAACTATGATCGCGGGGCCCT GACACCGGGCATTGTTCACATCGGTGTCGGTAATTTCCATCGTGCGCATCAGGCCTGGTATCTGCACCGTCTGATGCAGG ACGGCAAAGCGCATGACTGGGCCATCATCGGAGCGGGGGTGCGCCCCTACGATACCGCGATGCGCGAAAAACTGATGGCG CAGGACTGCCTTACCACGCTGATCGAACTGGACCCTCGGAAAACCTCGGCTGAGGTGGTGGGTTCGATGATCGACTACCT GCCGATCGAGGATGGAAATGGCGCGCTGATCCGTCAGATGGCGGACCCTTCCATCCGGATCGTCTCGATGACCGTTACCG AAAGCGGGTACTATATCGACCCGGTCACCAAGGGGTTTGATGCCAGCCACGAAGACATGCTTCACGATGCTGCACATGTC GATACGCCGCGCACGGCGTTTGGCGCAATCATCGCCGCACTTCGCGCCCGTCGTGCTGCCGGGCATCTGCCTTTTACCTG CCAAAGCTGTGACAATCTGCAGGGCAATGGCGATATTCTGCGACAGACGGTGGTATCGCTCGCTCGCATGTCCGATCCTG CTCTTGCCGGTTGGATCGATGAAAATGGGGCCTTCCCCAATTCGATGGTTGATTGCATTGCGCCTGCCACCGGTCCCAAG GAGCTCGCCCTTGCCCGCGATTTCGGGATCAAGGACAACGCAGTAGTGACGCATGAAGCCTTCCGTCAATGGGTCATCGA AGACGCATTTTGCGCAGGCCGTCCGGATTGGGAACAAACCGGCGCGACATTCACGGATGATGTCCACGCATATGAGACGA TGAAAATCCGCATTCTGAACGCGGGCCATCAGGTCATTGCAAATGTTGGTGAAACCCTCGGGATTGAGACGATTGCAGGC TGTATGGCCGATCCCAACATTCGCGCCTTCTTCGGCGCGGTCCAGAGAAGCGAGATTGCGCCGACTGTCGCGCCGGTGCC GGGAAAGACACCGGCAGAATACGTTGACCTGATCGAGCAGCGGTTCGCGAACCCGCAGATTGTCGACACGACACGTCGCG TGGCCTTTGACGGCTCCGCGCGTCACACCGGATTCGTGCTGCCCATTCTGCGCGATCAACTGGCTGCAGGGCGATCCATT GAAGGGCTCGCGCTGGTTGAGGCCCTCTGGGCGCGCATGTGTGCAGGTACGCGCGAAGATGGCTCTGAGATCGCCGCAAA CGATCCTATCTGGGATGCGCTCAAAGATGCTGCCTTGGCTGCAAAAACACGCCCCGTGGCATGGCTTGAGCAGACCAATC TATACGGGGATCTATTGGAAAACCCCACGTTCTCTCGGGCATTTATCAGGTGGTTGGAGATGATCTGGTCGCAAGGCTGC CAGGCTGCTCTTGTCGAATATACCAAGAGTGCGCGCGCATAA
Upstream 100 bases:
>100_bases GCGGCGGCACCATGGCTTACCTGACCCAAACGGATGTCTGTCCGGCGGGCCGCGCCGCAATCCCTATCATCGCACAACCT TTTAACGTGGATATTGGACC
Downstream 100 bases:
>100_bases AGCGTCTGACCAAATACCTCACACATCGAATATCACGTAACGCGTTGAAATCTTTGATTTCAGGCAGCGTTATGTGATCG AGGTTTTCCGCATGACGCTT
Product: mannitol 2-dehydrogenase
Products: NA
Alternate protein names: M2DH; MDH [H]
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MDELIALSNATLDRLRVERPNYDRGALTPGIVHIGVGNFHRAHQAWYLHRLMQDGKAHDWAIIGAGVRPYDTAMREKLMA QDCLTTLIELDPRKTSAEVVGSMIDYLPIEDGNGALIRQMADPSIRIVSMTVTESGYYIDPVTKGFDASHEDMLHDAAHV DTPRTAFGAIIAALRARRAAGHLPFTCQSCDNLQGNGDILRQTVVSLARMSDPALAGWIDENGAFPNSMVDCIAPATGPK ELALARDFGIKDNAVVTHEAFRQWVIEDAFCAGRPDWEQTGATFTDDVHAYETMKIRILNAGHQVIANVGETLGIETIAG CMADPNIRAFFGAVQRSEIAPTVAPVPGKTPAEYVDLIEQRFANPQIVDTTRRVAFDGSARHTGFVLPILRDQLAAGRSI EGLALVEALWARMCAGTREDGSEIAANDPIWDALKDAALAAKTRPVAWLEQTNLYGDLLENPTFSRAFIRWLEMIWSQGC QAALVEYTKSARA
Sequences:
>Translated_493_residues MDELIALSNATLDRLRVERPNYDRGALTPGIVHIGVGNFHRAHQAWYLHRLMQDGKAHDWAIIGAGVRPYDTAMREKLMA QDCLTTLIELDPRKTSAEVVGSMIDYLPIEDGNGALIRQMADPSIRIVSMTVTESGYYIDPVTKGFDASHEDMLHDAAHV DTPRTAFGAIIAALRARRAAGHLPFTCQSCDNLQGNGDILRQTVVSLARMSDPALAGWIDENGAFPNSMVDCIAPATGPK ELALARDFGIKDNAVVTHEAFRQWVIEDAFCAGRPDWEQTGATFTDDVHAYETMKIRILNAGHQVIANVGETLGIETIAG CMADPNIRAFFGAVQRSEIAPTVAPVPGKTPAEYVDLIEQRFANPQIVDTTRRVAFDGSARHTGFVLPILRDQLAAGRSI EGLALVEALWARMCAGTREDGSEIAANDPIWDALKDAALAAKTRPVAWLEQTNLYGDLLENPTFSRAFIRWLEMIWSQGC QAALVEYTKSARA >Mature_493_residues MDELIALSNATLDRLRVERPNYDRGALTPGIVHIGVGNFHRAHQAWYLHRLMQDGKAHDWAIIGAGVRPYDTAMREKLMA QDCLTTLIELDPRKTSAEVVGSMIDYLPIEDGNGALIRQMADPSIRIVSMTVTESGYYIDPVTKGFDASHEDMLHDAAHV DTPRTAFGAIIAALRARRAAGHLPFTCQSCDNLQGNGDILRQTVVSLARMSDPALAGWIDENGAFPNSMVDCIAPATGPK ELALARDFGIKDNAVVTHEAFRQWVIEDAFCAGRPDWEQTGATFTDDVHAYETMKIRILNAGHQVIANVGETLGIETIAG CMADPNIRAFFGAVQRSEIAPTVAPVPGKTPAEYVDLIEQRFANPQIVDTTRRVAFDGSARHTGFVLPILRDQLAAGRSI EGLALVEALWARMCAGTREDGSEIAANDPIWDALKDAALAAKTRPVAWLEQTNLYGDLLENPTFSRAFIRWLEMIWSQGC QAALVEYTKSARA
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=479, Percent_Identity=37.9958246346555, Blast_Score=292, Evalue=4e-80, Organism=Escherichia coli, GI1788497, Length=479, Percent_Identity=35.0730688935282, Blast_Score=275, Evalue=7e-75, Organism=Escherichia coli, GI1787823, Length=475, Percent_Identity=35.7894736842105, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI48994885, Length=390, Percent_Identity=25.6410256410256, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790028, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6324401, Length=474, Percent_Identity=37.5527426160338, Blast_Score=319, Evalue=5e-88, Organism=Saccharomyces cerevisiae, GI6320765, Length=474, Percent_Identity=37.5527426160338, Blast_Score=319, Evalue=5e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.67 [H]
Molecular weight: Translated: 53992; Mature: 53992
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELIALSNATLDRLRVERPNYDRGALTPGIVHIGVGNFHRAHQAWYLHRLMQDGKAHDW CCCEEECCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCE AIIGAGVRPYDTAMREKLMAQDCLTTLIELDPRKTSAEVVGSMIDYLPIEDGNGALIRQM EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEHCC ADPSIRIVSMTVTESGYYIDPVTKGFDASHEDMLHDAAHVDTPRTAFGAIIAALRARRAA CCCCEEEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC GHLPFTCQSCDNLQGNGDILRQTVVSLARMSDPALAGWIDENGAFPNSMVDCIAPATGPK CCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCHH ELALARDFGIKDNAVVTHEAFRQWVIEDAFCAGRPDWEQTGATFTDDVHAYETMKIRILN HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHEEEEEEEEEC AGHQVIANVGETLGIETIAGCMADPNIRAFFGAVQRSEIAPTVAPVPGKTPAEYVDLIEQ CCHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH RFANPQIVDTTRRVAFDGSARHTGFVLPILRDQLAAGRSIEGLALVEALWARMCAGTRED HCCCCCEECCHHHEEECCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC GSEIAANDPIWDALKDAALAAKTRPVAWLEQTNLYGDLLENPTFSRAFIRWLEMIWSQGC CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCC QAALVEYTKSARA HHHHHHHHHHCCC >Mature Secondary Structure MDELIALSNATLDRLRVERPNYDRGALTPGIVHIGVGNFHRAHQAWYLHRLMQDGKAHDW CCCEEECCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCE AIIGAGVRPYDTAMREKLMAQDCLTTLIELDPRKTSAEVVGSMIDYLPIEDGNGALIRQM EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEHCC ADPSIRIVSMTVTESGYYIDPVTKGFDASHEDMLHDAAHVDTPRTAFGAIIAALRARRAA CCCCEEEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC GHLPFTCQSCDNLQGNGDILRQTVVSLARMSDPALAGWIDENGAFPNSMVDCIAPATGPK CCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCHH ELALARDFGIKDNAVVTHEAFRQWVIEDAFCAGRPDWEQTGATFTDDVHAYETMKIRILN HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHEEEEEEEEEC AGHQVIANVGETLGIETIAGCMADPNIRAFFGAVQRSEIAPTVAPVPGKTPAEYVDLIEQ CCHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH RFANPQIVDTTRRVAFDGSARHTGFVLPILRDQLAAGRSIEGLALVEALWARMCAGTRED HCCCCCEECCHHHEEECCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC GSEIAANDPIWDALKDAALAAKTRPVAWLEQTNLYGDLLENPTFSRAFIRWLEMIWSQGC CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCC QAALVEYTKSARA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8254318 [H]