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The map label for this gene is secY [H]

Identifier: 110678749

GI number: 110678749

Start: 1361998

End: 1363362

Strand: Direct

Name: secY [H]

Synonym: RD1_1432

Alternate gene names: 110678749

Gene position: 1361998-1363362 (Clockwise)

Preceding gene: 110678748

Following gene: 110678750

Centisome position: 32.95

GC content: 57.95

Gene sequence:

>1365_bases
ATGGTTTCTGCTGTCGAGAGCATGGCTGCCAATACGAGTTGGTCCGCGCTGGGTAAGGCAACTGACCTGCGCAACCGTAT
CCTGTTTACGCTGGGACTGCTGATCGTTTACCGCCTCGGGACGTTTATCCCGGTGCCGGGGATTGATGGCGTCGCCCTGC
GCGAGTTCATGGAGCAGGCGGGGCAGGGCATCGGCGGTATGGTGTCGATGTTTACCGGCGGCGCCTTGGGGCGGATGGGG
ATCTTTGCCCTGGGCATCATGCCCTATATATCGGCCTCGATCATCGTGCAGCTTATGACGGCCATGGTGCCCAAGCTGGA
AGCCCTGAAGAAAGAGGGCGAGCAGGGCCGCAAGAAGATCAACCAATACACGCGCTATGGTACGGTTTTCCTTGCCACGT
TGCAGGCCTATGGCCTTGCGGTGAGCCTTGAAGCGGGCGACATCGTCACCGATCCGGGCATGTTTTTCCGCGCATCCTGC
GTGATTACGCTGGTCGGTGGCACCATGTTCCTGATGTGGCTGGGCGAGCAGATCACCGCGCGCGGCATCGGTAACGGTAT
TTCGCTGATCATCTTTGTGGGCATTATCGCCGAGGTTCCGGCCGCGATGGCGCAGTTCTTTGCCTCTGGCCGCTCGGGCG
CGATCAGCCCTGCGGTGATCATCGGTGTGATTATCATGGTGATCGCGACGATCATGTTCGTGGTGTTCATGGAGCGTGCC
CTGCGCAAGATCCACATACAATACCCGCGCCGTCAGGTGGGCATGAAGGTTTATGACGGTGGTTCCAGCCACTTGCCGGT
CAAGGTCAACCCGGCGGGCGTTATCCCGGCGATCTTTGCCTCGTCGCTTTTGTTGCTGCCGGTAACGATCAGCACGTTCT
CGGGCAATTCGACGAACCCGATCATGTCGTGGCTGCTGGCGAATTTTGGCCCCGGTCAGCCGCTCTATCTGGCGTTTTTC
ACGACGATGATTGTGTTCTTTACCTATTTCTACACGTTCAACGTCAGCTTCAAGCCAGACGATGTGGCGGATAACCTTAA
AAACCAGAACGGGTTCATTCCGGGCATCCGCCCGGGCAAGAAGACCTCGGAATATCTGGAATATGTGGTGAACCGCGTGC
TGGTTCTGGGCTCGGCCTATCTGGCGGCTGTGTGCCTCTTGCCGGAAATCCTGCGCGGTGAATTCGCCATTCCGTTCTAT
TTCGGCGGCACATCTGTTCTCATTGTCGTCTCGGTAACGATGGATACCATTCAGCAAGTGCAAAGCCATTTGCTGGCCCA
CCAATACGAAGGCCTGCTGGAGAAGTCGCAACTGCGCGGCAAAAGCGGCAAGGGCCGCAAGAAACGGAGCCCTGTGCGTC
GATGA

Upstream 100 bases:

>100_bases
GGCGGCGGCTGCGCCGCTTACATACGTCTTTAGTTTTCCATGACGCCGCCCAGCCGGAAAACGGCCCGGGCGGCGCATTT
GTTACGAAAGAGAGCCCTTC

Downstream 100 bases:

>100_bases
ATATAATACTGTTGGGGCCACCAGGGGCCGGTAAAGGAACACAGGCCCGGATGCTCGAACAAGAGCGCGGCATGGTCCAG
TTGAGCACCGGTGATATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MVSAVESMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSMFTGGALGRMG
IFALGIMPYISASIIVQLMTAMVPKLEALKKEGEQGRKKINQYTRYGTVFLATLQAYGLAVSLEAGDIVTDPGMFFRASC
VITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEVPAAMAQFFASGRSGAISPAVIIGVIIMVIATIMFVVFMERA
LRKIHIQYPRRQVGMKVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTNPIMSWLLANFGPGQPLYLAFF
TTMIVFFTYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGKKTSEYLEYVVNRVLVLGSAYLAAVCLLPEILRGEFAIPFY
FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGLLEKSQLRGKSGKGRKKRSPVRR

Sequences:

>Translated_454_residues
MVSAVESMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSMFTGGALGRMG
IFALGIMPYISASIIVQLMTAMVPKLEALKKEGEQGRKKINQYTRYGTVFLATLQAYGLAVSLEAGDIVTDPGMFFRASC
VITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEVPAAMAQFFASGRSGAISPAVIIGVIIMVIATIMFVVFMERA
LRKIHIQYPRRQVGMKVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTNPIMSWLLANFGPGQPLYLAFF
TTMIVFFTYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGKKTSEYLEYVVNRVLVLGSAYLAAVCLLPEILRGEFAIPFY
FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGLLEKSQLRGKSGKGRKKRSPVRR
>Mature_454_residues
MVSAVESMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQAGQGIGGMVSMFTGGALGRMG
IFALGIMPYISASIIVQLMTAMVPKLEALKKEGEQGRKKINQYTRYGTVFLATLQAYGLAVSLEAGDIVTDPGMFFRASC
VITLVGGTMFLMWLGEQITARGIGNGISLIIFVGIIAEVPAAMAQFFASGRSGAISPAVIIGVIIMVIATIMFVVFMERA
LRKIHIQYPRRQVGMKVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTNPIMSWLLANFGPGQPLYLAFF
TTMIVFFTYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGKKTSEYLEYVVNRVLVLGSAYLAAVCLLPEILRGEFAIPFY
FGGTSVLIVVSVTMDTIQQVQSHLLAHQYEGLLEKSQLRGKSGKGRKKRSPVRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=433, Percent_Identity=50.8083140877598, Blast_Score=390, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49234; Mature: 49234

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAVESMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQA
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GQGIGGMVSMFTGGALGRMGIFALGIMPYISASIIVQLMTAMVPKLEALKKEGEQGRKKI
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYTRYGTVFLATLQAYGLAVSLEAGDIVTDPGMFFRASCVITLVGGTMFLMWLGEQITA
HHHHHHHHHHHHHHHHHCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGIGNGISLIIFVGIIAEVPAAMAQFFASGRSGAISPAVIIGVIIMVIATIMFVVFMERA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRKIHIQYPRRQVGMKVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTNP
HHHHHHCCCHHHCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCHH
IMSWLLANFGPGQPLYLAFFTTMIVFFTYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCC
KTSEYLEYVVNRVLVLGSAYLAAVCLLPEILRGEFAIPFYFGGTSVLIVVSVTMDTIQQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEHHHHHHHHH
QSHLLAHQYEGLLEKSQLRGKSGKGRKKRSPVRR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVSAVESMAANTSWSALGKATDLRNRILFTLGLLIVYRLGTFIPVPGIDGVALREFMEQA
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GQGIGGMVSMFTGGALGRMGIFALGIMPYISASIIVQLMTAMVPKLEALKKEGEQGRKKI
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYTRYGTVFLATLQAYGLAVSLEAGDIVTDPGMFFRASCVITLVGGTMFLMWLGEQITA
HHHHHHHHHHHHHHHHHCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGIGNGISLIIFVGIIAEVPAAMAQFFASGRSGAISPAVIIGVIIMVIATIMFVVFMERA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRKIHIQYPRRQVGMKVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSGNSTNP
HHHHHHCCCHHHCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCHH
IMSWLLANFGPGQPLYLAFFTTMIVFFTYFYTFNVSFKPDDVADNLKNQNGFIPGIRPGK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCC
KTSEYLEYVVNRVLVLGSAYLAAVCLLPEILRGEFAIPFYFGGTSVLIVVSVTMDTIQQV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEHHHHHHHHH
QSHLLAHQYEGLLEKSQLRGKSGKGRKKRSPVRR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA