| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is chvG [H]
Identifier: 110678698
GI number: 110678698
Start: 1324176
End: 1325864
Strand: Direct
Name: chvG [H]
Synonym: RD1_1378
Alternate gene names: 110678698
Gene position: 1324176-1325864 (Clockwise)
Preceding gene: 110678697
Following gene: 110678699
Centisome position: 32.04
GC content: 57.31
Gene sequence:
>1689_bases ATGACCTCACTATCGTCCCAAGAGGAGAGCGTCGCGCCGGACGACGATCGGGCGACGTCACAGAAAGAAGCGCAAAGCGA AAAGAGCGAGGCACGCCGCTCACGCAGCTGGATGTCGCTGCGCTCATCCCCTTTGACGCGCAAGATCATTACCTGGAACC TGATAGCCCTTGTTTTTCTATTCTCGGGCATCGTCTACCTGAGCTCCTCGCGCGACGCATTGACGTTCCAACGGGCGGCA TCTCTGGTCACCGAAGCAGAATTGATTGCAGACGTCATAGAAGTGCAACTGCCAGCGGGCGCACCGGTCAATTTCGCGAC AGGTGACGGTATCGACATAGGTCTGACCCTCGAAAACCTCGACCTGCGCCGTGGTGTCGAGGTTTTTGTGTACGACCGTT CCAAAACGCTGATCGCGAACACCGAAGGCCGCCTCTCCGTCACGCCAGACTCCGCCGAAGCTGACCGTAAAACCTATCTT ACCGACGCTTTCAGATGGCTCTGGCACGCTGTATCAAGCCCTTTGCGCAATGCGCCTGACACCGCTCAAATGTCACTGAG CGACAAGATCAAGCCACTGATCGACGCGAGTTTTGAAGACGGAACAAAGTTTCGAAACCAATCCGACAATTCCGGCGGGA CGCTTTACACGGTGGTGACACCGGTGCTGCAAAACGGCACTGCCATCGGTGCTGTCGCGGTCGTAACTGCCGCAGGCGAA ATAGACAACCTTCTGCGCGGAGAGCGTGAACGCGTGCTGCAGATGTTTGTCATAGCAACTGTCGTGTCCGTCGGATTGAG CCTTGTGCTTGCCTCCACCATCGCGAACCCGCTGGCTGATCTGGCCGCGGCGGCAGAGATCGGCCGCGATAAAAACAACC GCAAGATGAAACCGGGGCGCATCAGAATCCCGGACCTTTCAGACCGCCCGGACGAGATCGGGCGGCTCAGCGCGGCATTG CGAAGTATGATTTCCGCTCTCTATAATCGCATCGACGGGAACGAGCAGTTCGCTGCGGATGTGGCACATGAGATCAAGAA CCCGCTGGCGTCCCTGCGATCCGCCGTCGGGACGCTGCGTATGGTCAAACGGGAGGACCAGCGCGAGAAACTCCTTGATG TGATCGACCATGATGTTCGCCGCCTTGATCGACTTGTCAGCGACATCTCCGACGCATCGCGGCTGGACAGCGAGTTGGTC AAGGAAGAGGCAGAACGGTTTGACGTCCTTGTGACCCTGACGAACCTCGGCCAGTATCTCGGAGAGGATGCACAATCCCA AGGCATTGACTTTATTACAGACCTTCCCGATTCCCCAATATTCGTGCATGGCCTTGAAGCGCGGCTTGCGCAGGTCTTTG TCAACCTGATCACCAATGCCGTGTCGTTTTGCGAAGATGGTGATGCGATCCGGATATGGGCGCGCAAGAAAGACAGCCGT GTGCTGATCGTCGTCGAAGACACCGGGCCCGGCATCCCAGAGGAAGCGCTGTTGCGCGTTTTCGAAAGGTTCTACTCCCA ACGCCCGGATGAACATTTCGGCAATAACTCAGGACTGGGCCTCGCCATTTCCAAGCAAATCGTGGAAGCCCATGGTGGGG TGATATGGGCCGAAAACATCCGCCCGACCGAAGCGGATATTACCTCTGAACCACTGGGGGCGCGTTTTGTTGTCGGGCTG CCGATCTAA
Upstream 100 bases:
>100_bases GAGTTCTCGGCGATTGAGACCCTTTACGGGATCGGCTACAGATATAACGAGGAATAAACCGCCGCATCTGTGTGATTAAG GGGACATATACTTGCGCGAC
Downstream 100 bases:
>100_bases TCGAAGGAGAGAGTGAGCGAAGTGTCCTGGCAAATGCTGCATGCGACTTGTGTGGATTATCACGCCAAAGGGGTCTTGAT CACAGGGCGCTCCGGTCAGG
Product: sensor histidine kinase ChvG, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MTSLSSQEESVAPDDDRATSQKEAQSEKSEARRSRSWMSLRSSPLTRKIITWNLIALVFLFSGIVYLSSSRDALTFQRAA SLVTEAELIADVIEVQLPAGAPVNFATGDGIDIGLTLENLDLRRGVEVFVYDRSKTLIANTEGRLSVTPDSAEADRKTYL TDAFRWLWHAVSSPLRNAPDTAQMSLSDKIKPLIDASFEDGTKFRNQSDNSGGTLYTVVTPVLQNGTAIGAVAVVTAAGE IDNLLRGERERVLQMFVIATVVSVGLSLVLASTIANPLADLAAAAEIGRDKNNRKMKPGRIRIPDLSDRPDEIGRLSAAL RSMISALYNRIDGNEQFAADVAHEIKNPLASLRSAVGTLRMVKREDQREKLLDVIDHDVRRLDRLVSDISDASRLDSELV KEEAERFDVLVTLTNLGQYLGEDAQSQGIDFITDLPDSPIFVHGLEARLAQVFVNLITNAVSFCEDGDAIRIWARKKDSR VLIVVEDTGPGIPEEALLRVFERFYSQRPDEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADITSEPLGARFVVGL PI
Sequences:
>Translated_562_residues MTSLSSQEESVAPDDDRATSQKEAQSEKSEARRSRSWMSLRSSPLTRKIITWNLIALVFLFSGIVYLSSSRDALTFQRAA SLVTEAELIADVIEVQLPAGAPVNFATGDGIDIGLTLENLDLRRGVEVFVYDRSKTLIANTEGRLSVTPDSAEADRKTYL TDAFRWLWHAVSSPLRNAPDTAQMSLSDKIKPLIDASFEDGTKFRNQSDNSGGTLYTVVTPVLQNGTAIGAVAVVTAAGE IDNLLRGERERVLQMFVIATVVSVGLSLVLASTIANPLADLAAAAEIGRDKNNRKMKPGRIRIPDLSDRPDEIGRLSAAL RSMISALYNRIDGNEQFAADVAHEIKNPLASLRSAVGTLRMVKREDQREKLLDVIDHDVRRLDRLVSDISDASRLDSELV KEEAERFDVLVTLTNLGQYLGEDAQSQGIDFITDLPDSPIFVHGLEARLAQVFVNLITNAVSFCEDGDAIRIWARKKDSR VLIVVEDTGPGIPEEALLRVFERFYSQRPDEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADITSEPLGARFVVGL PI >Mature_561_residues TSLSSQEESVAPDDDRATSQKEAQSEKSEARRSRSWMSLRSSPLTRKIITWNLIALVFLFSGIVYLSSSRDALTFQRAAS LVTEAELIADVIEVQLPAGAPVNFATGDGIDIGLTLENLDLRRGVEVFVYDRSKTLIANTEGRLSVTPDSAEADRKTYLT DAFRWLWHAVSSPLRNAPDTAQMSLSDKIKPLIDASFEDGTKFRNQSDNSGGTLYTVVTPVLQNGTAIGAVAVVTAAGEI DNLLRGERERVLQMFVIATVVSVGLSLVLASTIANPLADLAAAAEIGRDKNNRKMKPGRIRIPDLSDRPDEIGRLSAALR SMISALYNRIDGNEQFAADVAHEIKNPLASLRSAVGTLRMVKREDQREKLLDVIDHDVRRLDRLVSDISDASRLDSELVK EEAERFDVLVTLTNLGQYLGEDAQSQGIDFITDLPDSPIFVHGLEARLAQVFVNLITNAVSFCEDGDAIRIWARKKDSRV LIVVEDTGPGIPEEALLRVFERFYSQRPDEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADITSEPLGARFVVGLP I
Specific function: Member of a two-component regulatory system ChvG/ChvI. Activates ChvI by phosphorylation (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=230, Percent_Identity=32.1739130434783, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1786783, Length=312, Percent_Identity=25.6410256410256, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790861, Length=349, Percent_Identity=26.3610315186246, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI145693157, Length=255, Percent_Identity=27.843137254902, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790346, Length=265, Percent_Identity=26.7924528301887, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788549, Length=230, Percent_Identity=29.5652173913043, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1789149, Length=219, Percent_Identity=30.5936073059361, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790436, Length=231, Percent_Identity=28.1385281385281, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI48994928, Length=207, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1786600, Length=202, Percent_Identity=31.1881188118812, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789403, Length=283, Percent_Identity=27.9151943462898, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787374, Length=261, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788279, Length=292, Percent_Identity=25.3424657534247, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87081816, Length=234, Percent_Identity=29.0598290598291, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786912, Length=225, Percent_Identity=28.4444444444444, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI1787894, Length=342, Percent_Identity=24.5614035087719, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61619; Mature: 61488
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSSQEESVAPDDDRATSQKEAQSEKSEARRSRSWMSLRSSPLTRKIITWNLIALVFL CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FSGIVYLSSSRDALTFQRAASLVTEAELIADVIEVQLPAGAPVNFATGDGIDIGLTLENL HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC DLRRGVEVFVYDRSKTLIANTEGRLSVTPDSAEADRKTYLTDAFRWLWHAVSSPLRNAPD HHHCCCEEEEEECCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TAQMSLSDKIKPLIDASFEDGTKFRNQSDNSGGTLYTVVTPVLQNGTAIGAVAVVTAAGE CHHHCHHHHHHHHHCCCCCCCCHHCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHH IDNLLRGERERVLQMFVIATVVSVGLSLVLASTIANPLADLAAAAEIGRDKNNRKMKPGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE IRIPDLSDRPDEIGRLSAALRSMISALYNRIDGNEQFAADVAHEIKNPLASLRSAVGTLR EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVKREDQREKLLDVIDHDVRRLDRLVSDISDASRLDSELVKEEAERFDVLVTLTNLGQYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH GEDAQSQGIDFITDLPDSPIFVHGLEARLAQVFVNLITNAVSFCEDGDAIRIWARKKDSR CCCHHHCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE VLIVVEDTGPGIPEEALLRVFERFYSQRPDEHFGNNSGLGLAISKQIVEAHGGVIWAENI EEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEECCC RPTEADITSEPLGARFVVGLPI CCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure TSLSSQEESVAPDDDRATSQKEAQSEKSEARRSRSWMSLRSSPLTRKIITWNLIALVFL CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FSGIVYLSSSRDALTFQRAASLVTEAELIADVIEVQLPAGAPVNFATGDGIDIGLTLENL HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC DLRRGVEVFVYDRSKTLIANTEGRLSVTPDSAEADRKTYLTDAFRWLWHAVSSPLRNAPD HHHCCCEEEEEECCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TAQMSLSDKIKPLIDASFEDGTKFRNQSDNSGGTLYTVVTPVLQNGTAIGAVAVVTAAGE CHHHCHHHHHHHHHCCCCCCCCHHCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHH IDNLLRGERERVLQMFVIATVVSVGLSLVLASTIANPLADLAAAAEIGRDKNNRKMKPGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE IRIPDLSDRPDEIGRLSAALRSMISALYNRIDGNEQFAADVAHEIKNPLASLRSAVGTLR EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVKREDQREKLLDVIDHDVRRLDRLVSDISDASRLDSELVKEEAERFDVLVTLTNLGQYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHH GEDAQSQGIDFITDLPDSPIFVHGLEARLAQVFVNLITNAVSFCEDGDAIRIWARKKDSR CCCHHHCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCE VLIVVEDTGPGIPEEALLRVFERFYSQRPDEHFGNNSGLGLAISKQIVEAHGGVIWAENI EEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCEEEECCC RPTEADITSEPLGARFVVGLPI CCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407839; 11743193; 11743194 [H]