Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678673

Identifier: 110678673

GI number: 110678673

Start: 1303075

End: 1303668

Strand: Reverse

Name: 110678673

Synonym: RD1_1352

Alternate gene names: NA

Gene position: 1303668-1303075 (Counterclockwise)

Preceding gene: 110678674

Following gene: 110678672

Centisome position: 31.54

GC content: 63.97

Gene sequence:

>594_bases
GTGAGTGATGCTGAAACCCTCTCCGTCTATGCGGCCAAAGCGGATGACTATGCCAATCTGACCGACGAGGCCGCCGCTCG
GGACCCGAGCCTGGTCGCCTTTATCGCGGCCATGCCGAAGCGCGGGCGCGTCCTTGATCTGGGCTGTGGTCCGGGCGGGT
CAGCCGCCGCAATGGCACGAGCCGGGCTTGTTGTGGACGCCTTTGACCCGGTCCCTGAAATGGTGGCACTGGCCGGGCGC
CACGCGGGTGTGAGCGCCCGCAAAGCCGGTTTCGAGGATGTCACACAGGTCGATCACTACGATGGGATCTGGGCCAATTT
CTCGCTGCTCCATGCCCCGCGCGATGACATGCCAAAGCATTTGGCCCGGATCGCGACCGCCCTGAAACCCGGCGGGCGGT
TTCACATCGGGGTCAAAACCGGCACGGGCAGCAAACGCGATACCTTGGGCAGGCGTTACACATATTATAGCGAAAGCGAG
CTGGTCGACCTGCTGGCGGCGGCGGGGCTCACGGTATTTGATCGCCGCGAAGGCTGCGACACGGGTCTGGACGGCGTTGA
TGCCCATTGGATTGTACTGGCCGCCCATGCCTGA

Upstream 100 bases:

>100_bases
TCGCCTTTTCGATCTGGGGCCTCGCGCCAAGATGGTGGATGTCCCTGCGCATTTTGTTGACCAGCATCGTAGTCGCCTGT
CTGGCCGTCGGGGTGTTCCT

Downstream 100 bases:

>100_bases
GTTGTTCGCCTATACGGATGGTGCCTGTTCGGGCAACCCGGGCCCCGGCGGCTGGGGCGTTTTGCTGCAGGCCAAAGAGG
GCGACAGGCTGGTCAAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase Protein; Tellurite Resistance Protein-Related Protein; SAM-Dependent Methyltransferase; Type III Restriction Protein Res Subunit; Methyltransferase Family Protein; Tellurite Resistance Related Protein; Generic Methyltransferase; Methyltransferase Domain Family; 3-Demethylubiquinone-9 3-Methyltransferase

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSDAETLSVYAAKADDYANLTDEAAARDPSLVAFIAAMPKRGRVLDLGCGPGGSAAAMARAGLVVDAFDPVPEMVALAGR
HAGVSARKAGFEDVTQVDHYDGIWANFSLLHAPRDDMPKHLARIATALKPGGRFHIGVKTGTGSKRDTLGRRYTYYSESE
LVDLLAAAGLTVFDRREGCDTGLDGVDAHWIVLAAHA

Sequences:

>Translated_197_residues
MSDAETLSVYAAKADDYANLTDEAAARDPSLVAFIAAMPKRGRVLDLGCGPGGSAAAMARAGLVVDAFDPVPEMVALAGR
HAGVSARKAGFEDVTQVDHYDGIWANFSLLHAPRDDMPKHLARIATALKPGGRFHIGVKTGTGSKRDTLGRRYTYYSESE
LVDLLAAAGLTVFDRREGCDTGLDGVDAHWIVLAAHA
>Mature_196_residues
SDAETLSVYAAKADDYANLTDEAAARDPSLVAFIAAMPKRGRVLDLGCGPGGSAAAMARAGLVVDAFDPVPEMVALAGRH
AGVSARKAGFEDVTQVDHYDGIWANFSLLHAPRDDMPKHLARIATALKPGGRFHIGVKTGTGSKRDTLGRRYTYYSESEL
VDLLAAAGLTVFDRREGCDTGLDGVDAHWIVLAAHA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20825; Mature: 20693

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAETLSVYAAKADDYANLTDEAAARDPSLVAFIAAMPKRGRVLDLGCGPGGSAAAMAR
CCCCCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHH
AGLVVDAFDPVPEMVALAGRHAGVSARKAGFEDVTQVDHYDGIWANFSLLHAPRDDMPKH
CCEEEECCCCHHHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCEECEEEEECCCCCHHHH
LARIATALKPGGRFHIGVKTGTGSKRDTLGRRYTYYSESELVDLLAAAGLTVFDRREGCD
HHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCCC
TGLDGVDAHWIVLAAHA
CCCCCCCCEEEEEEECC
>Mature Secondary Structure 
SDAETLSVYAAKADDYANLTDEAAARDPSLVAFIAAMPKRGRVLDLGCGPGGSAAAMAR
CCCCEEEEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHH
AGLVVDAFDPVPEMVALAGRHAGVSARKAGFEDVTQVDHYDGIWANFSLLHAPRDDMPKH
CCEEEECCCCHHHHHHHHCCCCCCCHHHCCCHHHHHHHCCCCCEECEEEEECCCCCHHHH
LARIATALKPGGRFHIGVKTGTGSKRDTLGRRYTYYSESELVDLLAAAGLTVFDRREGCD
HHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCCC
TGLDGVDAHWIVLAAHA
CCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA