| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678625
Identifier: 110678625
GI number: 110678625
Start: 1261441
End: 1261632
Strand: Reverse
Name: 110678625
Synonym: RD1_1301
Alternate gene names: NA
Gene position: 1261632-1261441 (Counterclockwise)
Preceding gene: 110678627
Following gene: 110678624
Centisome position: 30.53
GC content: 66.67
Gene sequence:
>192_bases ATGGACATGAGCGAAGACACCACTGTAGCAGCCAGCGGGGACGCCCTGCCACCCGTGGCGGATGATCTTGCCGCGTCTGC AGGTGTTTCAGGCGATGATGCGCCGCCCCCCGGTTTTGAGGACGCGCCGGACGAGGACGCAGCACAAGACCCCGACGATG CGGGTGACAGCCCCCCGCCGCCCGACGTATAA
Upstream 100 bases:
>100_bases GATGTCAAATTCAATCACGGTGACCGTCCAGATGGATGGTGGCACAAGTACATCGCAAAGCTTCGCGATGGATGACGGGG CCGGTGCGCCGCCCCCGCCC
Downstream 100 bases:
>100_bases GATACAAGAGCCCGGCACCCTCAGGCGCCGGGCTTTTTTTCATGCAACATGATCGGAGCGATATGCCATGATACGCGGCT TTGTGAAATTCGAAGATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MDMSEDTTVAASGDALPPVADDLAASAGVSGDDAPPPGFEDAPDEDAAQDPDDAGDSPPPPDV
Sequences:
>Translated_63_residues MDMSEDTTVAASGDALPPVADDLAASAGVSGDDAPPPGFEDAPDEDAAQDPDDAGDSPPPPDV >Mature_63_residues MDMSEDTTVAASGDALPPVADDLAASAGVSGDDAPPPGFEDAPDEDAAQDPDDAGDSPPPPDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6136; Mature: 6136
Theoretical pI: Translated: 2.65; Mature: 2.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMSEDTTVAASGDALPPVADDLAASAGVSGDDAPPPGFEDAPDEDAAQDPDDAGDSPPP CCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDV CCC >Mature Secondary Structure MDMSEDTTVAASGDALPPVADDLAASAGVSGDDAPPPGFEDAPDEDAAQDPDDAGDSPPP CCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA