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The map label for this gene is codA [H]

Identifier: 110678617

GI number: 110678617

Start: 1256203

End: 1257300

Strand: Reverse

Name: codA [H]

Synonym: RD1_1293

Alternate gene names: 110678617

Gene position: 1257300-1256203 (Counterclockwise)

Preceding gene: 110678619

Following gene: 110678616

Centisome position: 30.42

GC content: 63.75

Gene sequence:

>1098_bases
ATGGGTTTAACCCCGGTCGCGCCCTCGCAAACGCCGCGCATCCTGATGCCCGCGCTGGTCGAGGCGCATTGTCACCTGGA
TAAATGCCACAGCATCGACCGCATGAAAGGCATCGGCGGCGATCTGTCCGCTGCCATCGCCGCGCAGACCACCGACAAAC
AGCATTGGACTGCCGATGACCTGCGCCACCGCATGACGCGCGGGCTGCGTGAGTTGGCGGCAGCGGGCTGCGCGCTGACA
CGCAGCCATATTGATTGGGGCACGGAACCCGCACCGCCCCTCGCATGGTCCGTCCTGCAGGAGGCCGCGACCGGGTTCCC
GGACATGACTGTCCAGATGGCAGCGCTCACCAGTATTTCGCAACTCGCGGACCGGGAATTCTGCTTTGCCGTGGCCAGCC
ATATCGCACGGCACCGTGCCGGGGTTCTGGGGGCCTTTGTTCTGCACCACGACCAAAGTGACGTAAACGACGGCCTTGCC
CATGTCTTCGCAGCCGCAGACCGCTTTGGCCTCGCGTTGGATTTCCACGTCGATGAAGGTCTCGGACCCTACAACGGGCT
TGAGGCGATATGTGATGCAGCTTTGGCCAGCAGGTTCGAGGGGCCAATCCTTTGCGGCCACGCAGTCAGCCTGATCGAGC
ATGACACAAAGACACGGGATCGGATAATCGACAAGCTTTTGCGTGCAAACATCTCAGTCTGCGCGCTGCCGACGACCAAT
CTCTATCTGCAGGGGCGGCGGTATGGCACGCCCCGCCAGCGCGGTCTGACCTGTCTGCGCGAACTAGATGCGGCGGGCGT
GCCAATCGTCATCGCATCGGATAATGTGGCGGATGCCTTCTGCCCCGTCGGACAACACGACCCGCGCGCGGCCCTGCATC
TGGCGTGCCTGGCCGCCCATCTGGACCCACCGATGGGGGACTGGCTACCTGCGATCACGCTGAACGCGGCGCGCGCCTTG
GGGCAGGACCCGGTCCACATGGACACAACCCCCATCTCGCAACTGCGCCTGTGCACCGCCGCAAGCACCGCCGAACTGCT
GGCCACGCGCAACCCATTGCTGCCGCTGCATCATTTTGAAAAGGCATCGACCCCATGA

Upstream 100 bases:

>100_bases
ACTGGTGCCTTTGTCGCTCCTGCGCGACCCCGCCACATTCGGCGGCCGCACGGAAGGTGATTGCCTGCGCGGCGATCTGA
CGGTCAAAGGGGGTCGGGCC

Downstream 100 bases:

>100_bases
CCTCAATCTCTGGCAAAACTGACATAGACTGGCGTGCCTTTGCCGCAGCCCTCGCCCCCGTGCAGGTGATCGACGAGCCG
GTACTGGTCAAAAAGCGCAG

Product: cytosine deaminase, putative

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MGLTPVAPSQTPRILMPALVEAHCHLDKCHSIDRMKGIGGDLSAAIAAQTTDKQHWTADDLRHRMTRGLRELAAAGCALT
RSHIDWGTEPAPPLAWSVLQEAATGFPDMTVQMAALTSISQLADREFCFAVASHIARHRAGVLGAFVLHHDQSDVNDGLA
HVFAAADRFGLALDFHVDEGLGPYNGLEAICDAALASRFEGPILCGHAVSLIEHDTKTRDRIIDKLLRANISVCALPTTN
LYLQGRRYGTPRQRGLTCLRELDAAGVPIVIASDNVADAFCPVGQHDPRAALHLACLAAHLDPPMGDWLPAITLNAARAL
GQDPVHMDTTPISQLRLCTAASTAELLATRNPLLPLHHFEKASTP

Sequences:

>Translated_365_residues
MGLTPVAPSQTPRILMPALVEAHCHLDKCHSIDRMKGIGGDLSAAIAAQTTDKQHWTADDLRHRMTRGLRELAAAGCALT
RSHIDWGTEPAPPLAWSVLQEAATGFPDMTVQMAALTSISQLADREFCFAVASHIARHRAGVLGAFVLHHDQSDVNDGLA
HVFAAADRFGLALDFHVDEGLGPYNGLEAICDAALASRFEGPILCGHAVSLIEHDTKTRDRIIDKLLRANISVCALPTTN
LYLQGRRYGTPRQRGLTCLRELDAAGVPIVIASDNVADAFCPVGQHDPRAALHLACLAAHLDPPMGDWLPAITLNAARAL
GQDPVHMDTTPISQLRLCTAASTAELLATRNPLLPLHHFEKASTP
>Mature_364_residues
GLTPVAPSQTPRILMPALVEAHCHLDKCHSIDRMKGIGGDLSAAIAAQTTDKQHWTADDLRHRMTRGLRELAAAGCALTR
SHIDWGTEPAPPLAWSVLQEAATGFPDMTVQMAALTSISQLADREFCFAVASHIARHRAGVLGAFVLHHDQSDVNDGLAH
VFAAADRFGLALDFHVDEGLGPYNGLEAICDAALASRFEGPILCGHAVSLIEHDTKTRDRIIDKLLRANISVCALPTTNL
YLQGRRYGTPRQRGLTCLRELDAAGVPIVIASDNVADAFCPVGQHDPRAALHLACLAAHLDPPMGDWLPAITLNAARALG
QDPVHMDTTPISQLRLCTAASTAELLATRNPLLPLHHFEKASTP

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=316, Percent_Identity=24.3670886075949, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 39195; Mature: 39064

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTPVAPSQTPRILMPALVEAHCHLDKCHSIDRMKGIGGDLSAAIAAQTTDKQHWTADD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHCCCCCCCCCHHH
LRHRMTRGLRELAAAGCALTRSHIDWGTEPAPPLAWSVLQEAATGFPDMTVQMAALTSIS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QLADREFCFAVASHIARHRAGVLGAFVLHHDQSDVNDGLAHVFAAADRFGLALDFHVDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCC
LGPYNGLEAICDAALASRFEGPILCGHAVSLIEHDTKTRDRIIDKLLRANISVCALPTTN
CCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCC
LYLQGRRYGTPRQRGLTCLRELDAAGVPIVIASDNVADAFCPVGQHDPRAALHLACLAAH
EEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHH
LDPPMGDWLPAITLNAARALGQDPVHMDTTPISQLRLCTAASTAELLATRNPLLPLHHFE
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
KASTP
CCCCC
>Mature Secondary Structure 
GLTPVAPSQTPRILMPALVEAHCHLDKCHSIDRMKGIGGDLSAAIAAQTTDKQHWTADD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHCCCCCCCCCHHH
LRHRMTRGLRELAAAGCALTRSHIDWGTEPAPPLAWSVLQEAATGFPDMTVQMAALTSIS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QLADREFCFAVASHIARHRAGVLGAFVLHHDQSDVNDGLAHVFAAADRFGLALDFHVDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCC
LGPYNGLEAICDAALASRFEGPILCGHAVSLIEHDTKTRDRIIDKLLRANISVCALPTTN
CCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCC
LYLQGRRYGTPRQRGLTCLRELDAAGVPIVIASDNVADAFCPVGQHDPRAALHLACLAAH
EEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHH
LDPPMGDWLPAITLNAARALGQDPVHMDTTPISQLRLCTAASTAELLATRNPLLPLHHFE
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
KASTP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]