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The map label for this gene is rsmI [H]

Identifier: 110678519

GI number: 110678519

Start: 1154785

End: 1155642

Strand: Direct

Name: rsmI [H]

Synonym: RD1_1190

Alternate gene names: 110678519

Gene position: 1154785-1155642 (Clockwise)

Preceding gene: 110678515

Following gene: 110678520

Centisome position: 27.94

GC content: 60.14

Gene sequence:

>858_bases
TTGAATTTTCAAAAGGTGTCTTTGGCGGCGGGGCTCTATTTTGTCGGCGTGCCGATCGGGACGGCGCGCGACATTACGCT
CAGGGCGCTGGATGTGCTGGCAAGCGCGGATATTCTGGCCGCGGAAGACACGCGCAGTCTGCGCCGGTTGATGGATATAC
ACGCTGTGCCGCTGGCGGGCAGGCAGGTGATCTCGCTGCACGATCACACAGGTGGTGGAACCGCCGCGCGTCTGGTCGAA
GCAATCGCAGCGGGGTCATCCGTGGCCTACGCGTCAGAAGCCGGGATGCCCCTGATTGCGGACCCCGGTTTCGAGTTGGG
GCGCGCGGTTCATGCGGCCGATCAGATGGTGACCTGTGCGCCGGGACCATCAGCCGTTTTAACGGCACTGGTACTTGCGG
GCTTGCCGACGGATGCGTTTTTCTTTGCCGGATTTCTGCCCAATGCCAAGGCGGCGCGGCGGCGTGGGTTGGAAGACCTG
CGCGATATTCCCGCGACGCTTGTAATCTACGAATCGCCCAAGCGCCTCGCAGCGTTTCTTGCAGATGCTGCCGAGGTGTT
CGGGGGCGAACGGCAGGTTTCCGTGTGTCGCGAGATCACGAAGAAGTTCGAGGAGACCCGAAAGGGAACGCTGTCGGAAC
TGGCCGCTGCCTACGCGGATCAAAAGGTAAGGGGCGAAATCGTCGTTCTGATTGACCGTAACCGTTCAGAGAAAATTACC
GAATCTGATTTAGAAACGGACCTGACGAAGGCGCTGGCAGGGCATTCCATGCGGGATGCCGTGGATATGGTTGCCAAGGC
GCATAACATACCGCGCCGACAGGTCTATCAGATGGCGCTTGCCCTGAACGAAGGATGA

Upstream 100 bases:

>100_bases
GAAAACGGCAAACATGAGGCGATACTCCATACAAGGTGCGCCCGCGGCGGGCGCGGATCAGATATCGCGATCATAGTCGT
CACGAAAGGCGGGTCCAGCG

Downstream 100 bases:

>100_bases
CACAGATGCCGCAAACCAATGCAAGGGTTCATGCCGGACGCATGGCATACCATGCAGGCCTCTCGGCAGAGGCATCGGTC
ATTCGTGAATACGAAAGTCA

Product: tetrapyrrole methylase domain-containing protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNFQKVSLAAGLYFVGVPIGTARDITLRALDVLASADILAAEDTRSLRRLMDIHAVPLAGRQVISLHDHTGGGTAARLVE
AIAAGSSVAYASEAGMPLIADPGFELGRAVHAADQMVTCAPGPSAVLTALVLAGLPTDAFFFAGFLPNAKAARRRGLEDL
RDIPATLVIYESPKRLAAFLADAAEVFGGERQVSVCREITKKFEETRKGTLSELAAAYADQKVRGEIVVLIDRNRSEKIT
ESDLETDLTKALAGHSMRDAVDMVAKAHNIPRRQVYQMALALNEG

Sequences:

>Translated_285_residues
MNFQKVSLAAGLYFVGVPIGTARDITLRALDVLASADILAAEDTRSLRRLMDIHAVPLAGRQVISLHDHTGGGTAARLVE
AIAAGSSVAYASEAGMPLIADPGFELGRAVHAADQMVTCAPGPSAVLTALVLAGLPTDAFFFAGFLPNAKAARRRGLEDL
RDIPATLVIYESPKRLAAFLADAAEVFGGERQVSVCREITKKFEETRKGTLSELAAAYADQKVRGEIVVLIDRNRSEKIT
ESDLETDLTKALAGHSMRDAVDMVAKAHNIPRRQVYQMALALNEG
>Mature_285_residues
MNFQKVSLAAGLYFVGVPIGTARDITLRALDVLASADILAAEDTRSLRRLMDIHAVPLAGRQVISLHDHTGGGTAARLVE
AIAAGSSVAYASEAGMPLIADPGFELGRAVHAADQMVTCAPGPSAVLTALVLAGLPTDAFFFAGFLPNAKAARRRGLEDL
RDIPATLVIYESPKRLAAFLADAAEVFGGERQVSVCREITKKFEETRKGTLSELAAAYADQKVRGEIVVLIDRNRSEKIT
ESDLETDLTKALAGHSMRDAVDMVAKAHNIPRRQVYQMALALNEG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=244, Percent_Identity=38.9344262295082, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30392; Mature: 30392

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQKVSLAAGLYFVGVPIGTARDITLRALDVLASADILAAEDTRSLRRLMDIHAVPLAG
CCCCHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCC
RQVISLHDHTGGGTAARLVEAIAAGSSVAYASEAGMPLIADPGFELGRAVHAADQMVTCA
CEEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHCCCCEEECCCHHHHHHHHHHHCEEEEC
PGPSAVLTALVLAGLPTDAFFFAGFLPNAKAARRRGLEDLRDIPATLVIYESPKRLAAFL
CCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCHHHHHCCCEEEEEECCHHHHHHHH
ADAAEVFGGERQVSVCREITKKFEETRKGTLSELAAAYADQKVRGEIVVLIDRNRSEKIT
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH
ESDLETDLTKALAGHSMRDAVDMVAKAHNIPRRQVYQMALALNEG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFQKVSLAAGLYFVGVPIGTARDITLRALDVLASADILAAEDTRSLRRLMDIHAVPLAG
CCCCHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCC
RQVISLHDHTGGGTAARLVEAIAAGSSVAYASEAGMPLIADPGFELGRAVHAADQMVTCA
CEEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHCCCCEEECCCHHHHHHHHHHHCEEEEC
PGPSAVLTALVLAGLPTDAFFFAGFLPNAKAARRRGLEDLRDIPATLVIYESPKRLAAFL
CCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCHHHHHCCCEEEEEECCHHHHHHHH
ADAAEVFGGERQVSVCREITKKFEETRKGTLSELAAAYADQKVRGEIVVLIDRNRSEKIT
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH
ESDLETDLTKALAGHSMRDAVDMVAKAHNIPRRQVYQMALALNEG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]