| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678466
Identifier: 110678466
GI number: 110678466
Start: 1095302
End: 1095523
Strand: Reverse
Name: 110678466
Synonym: RD1_1131
Alternate gene names: NA
Gene position: 1095523-1095302 (Counterclockwise)
Preceding gene: 110678467
Following gene: 110678465
Centisome position: 26.51
GC content: 59.46
Gene sequence:
>222_bases ATGCCATACGTGAACATCAAGGTGACACAAGAGGGCGGCCCGCAGGGAACCGGTCCCTCGGCGCAGGAAAAGGCCCGGCT AGTTGCAGGGGTCACGGAACTGCTGTTCGAGGTGCTGGGCAAAAACCCTGCGACAACTTTCGTCGTGATTGACGAGGTGT CACTCGACAATTGGGGGATGGATGGCAAGCAGGTGCGGACAATTCGCGCAGCGCAAGGCTGA
Upstream 100 bases:
>100_bases GGTCGCAACTACCAAGACCTGCTGACACTCATCAACACGGAGGACGGATGGCGGGTGCTGACCAAGGTATTCTCAATCGT CGAACGAAAGGAATGAACCA
Downstream 100 bases:
>100_bases TCGCGCTATCCAGACCTTCAGTCAGAAACGGCATATGTCGGTGCGCTCCAACGCGCGCCGGCGTCTACGCGGGGGGCTTT ATGCAGCGGAAGCTATACAA
Product: tautomerase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPYVNIKVTQEGGPQGTGPSAQEKARLVAGVTELLFEVLGKNPATTFVVIDEVSLDNWGMDGKQVRTIRAAQG
Sequences:
>Translated_73_residues MPYVNIKVTQEGGPQGTGPSAQEKARLVAGVTELLFEVLGKNPATTFVVIDEVSLDNWGMDGKQVRTIRAAQG >Mature_72_residues PYVNIKVTQEGGPQGTGPSAQEKARLVAGVTELLFEVLGKNPATTFVVIDEVSLDNWGMDGKQVRTIRAAQG
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR018191 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 7786; Mature: 7655
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYVNIKVTQEGGPQGTGPSAQEKARLVAGVTELLFEVLGKNPATTFVVIDEVSLDNWGM CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC DGKQVRTIRAAQG CCCEEEEEECCCC >Mature Secondary Structure PYVNIKVTQEGGPQGTGPSAQEKARLVAGVTELLFEVLGKNPATTFVVIDEVSLDNWGM CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC DGKQVRTIRAAQG CCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157608 [H]