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The map label for this gene is 110678445

Identifier: 110678445

GI number: 110678445

Start: 1061940

End: 1062599

Strand: Direct

Name: 110678445

Synonym: RD1_1110

Alternate gene names: NA

Gene position: 1061940-1062599 (Clockwise)

Preceding gene: 110678444

Following gene: 110678453

Centisome position: 25.69

GC content: 61.06

Gene sequence:

>660_bases
ATGATACCTGAGAGCACGAAGCGACCTGTGGGCAATTCGCTGTTTGTGGCTGCCCTGATCCTGTTTGCGCTGCCCTTCGC
CTATTATGCGGTGGCGCGCGGCATGATGCTGAACGATCCCGGCGAACAGGCACTGTCGCGGCTGTTTCACGGTGGTGCCG
CACTGAGCAATACCGCGGTCTACGGCCATATGATCGCGGGTGGTTTGATCACCGCACTCGCGCCGCTGCAGTTGTCGCGG
GTTTTGCGCCAGCGCGCGGCCCTGCTGCACCGCACTTTGGGGTATGTTCTTGTCAGTGCGGCCATGTTCACCAGCCTCGG
CGGGCTGATCTATATCGTGCTGCAAGGCACCATTGGTGGCCCGGTCATGAGCATCGGCTTTGCGCTATATGGCATCCTGA
TGCTTTTGGCCTGCGTCCAGACAGTGCGCTATGCGCGGTTGCGGCACCCACTTCACCGGCTTTGGGCCGAACGACTGGTG
ATCCTCGCGCTGGCCTCATTGCTCTACCGCGTGCATTACGGCGTTTGGGAAATCCTGACCGGTGGGCTTGGGTCACGGGA
TGACTTTTCCGGGCCGTTCGATGTCATTCAGGTCTTTGCGTTCTATCTGCCCTACCTTGCCCTGCACGGCTGGCTCTGGC
GCAGGCGGGAATCCCGCTAG

Upstream 100 bases:

>100_bases
TGTCAATGGGACGACCGTATTCGTGGATGGCGGGATCACGGCATCGCTTTAGACGCAAAGCGCTTTTCAAAGCGGCCCAT
GACGTGATCAACTCGACCCC

Downstream 100 bases:

>100_bases
GCTTCAACCTTCAGAATGCGGCTGTGTTTCTGAATTTCCGCGCGGACCTGTTCAAAGGTTGTAAAACCCCGCGCCTCCAG
CACCGGGATCAGCGCAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIPESTKRPVGNSLFVAALILFALPFAYYAVARGMMLNDPGEQALSRLFHGGAALSNTAVYGHMIAGGLITALAPLQLSR
VLRQRAALLHRTLGYVLVSAAMFTSLGGLIYIVLQGTIGGPVMSIGFALYGILMLLACVQTVRYARLRHPLHRLWAERLV
ILALASLLYRVHYGVWEILTGGLGSRDDFSGPFDVIQVFAFYLPYLALHGWLWRRRESR

Sequences:

>Translated_219_residues
MIPESTKRPVGNSLFVAALILFALPFAYYAVARGMMLNDPGEQALSRLFHGGAALSNTAVYGHMIAGGLITALAPLQLSR
VLRQRAALLHRTLGYVLVSAAMFTSLGGLIYIVLQGTIGGPVMSIGFALYGILMLLACVQTVRYARLRHPLHRLWAERLV
ILALASLLYRVHYGVWEILTGGLGSRDDFSGPFDVIQVFAFYLPYLALHGWLWRRRESR
>Mature_219_residues
MIPESTKRPVGNSLFVAALILFALPFAYYAVARGMMLNDPGEQALSRLFHGGAALSNTAVYGHMIAGGLITALAPLQLSR
VLRQRAALLHRTLGYVLVSAAMFTSLGGLIYIVLQGTIGGPVMSIGFALYGILMLLACVQTVRYARLRHPLHRLWAERLV
ILALASLLYRVHYGVWEILTGGLGSRDDFSGPFDVIQVFAFYLPYLALHGWLWRRRESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24172; Mature: 24172

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPESTKRPVGNSLFVAALILFALPFAYYAVARGMMLNDPGEQALSRLFHGGAALSNTAV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHH
YGHMIAGGLITALAPLQLSRVLRQRAALLHRTLGYVLVSAAMFTSLGGLIYIVLQGTIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVMSIGFALYGILMLLACVQTVRYARLRHPLHRLWAERLVILALASLLYRVHYGVWEILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLGSRDDFSGPFDVIQVFAFYLPYLALHGWLWRRRESR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPESTKRPVGNSLFVAALILFALPFAYYAVARGMMLNDPGEQALSRLFHGGAALSNTAV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHH
YGHMIAGGLITALAPLQLSRVLRQRAALLHRTLGYVLVSAAMFTSLGGLIYIVLQGTIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PVMSIGFALYGILMLLACVQTVRYARLRHPLHRLWAERLVILALASLLYRVHYGVWEILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLGSRDDFSGPFDVIQVFAFYLPYLALHGWLWRRRESR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA