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The map label for this gene is 110678442

Identifier: 110678442

GI number: 110678442

Start: 1059172

End: 1059921

Strand: Reverse

Name: 110678442

Synonym: RD1_1107

Alternate gene names: NA

Gene position: 1059921-1059172 (Counterclockwise)

Preceding gene: 110678443

Following gene: 110678441

Centisome position: 25.64

GC content: 58.8

Gene sequence:

>750_bases
ATGGACCTGACAATGCTCATCGTGATCGCGGGCTTTGCCTTTCTGGTGTCCGGCGCAATCAAAGGGGTCACCGGCATCGG
CCTGCCGACGGCGGCCATTGCGTTCATGACGCTTTTTCTGGACCCGCGCACGGCAATCGCGCTGGTGCTTTTCCCGATGC
TGGGCTCGAATCTGTGGCAGATGCTGCGCGGTGGATTGCTGAAACGAACAGCACGCCGATACTGGCTTTTTGCCGCCGTT
CTGTTTCTGGGCGTCGGGACAACGGCCATCATGACGCAAACCACATCAGACCGCGCGCTGCTCGCTATTCTTGGCATTGT
GGTGCTGATCTTTGTCGCGGTCAGTTGGCGCAAACTGCTGCCGCCCCTCGCCGACCGCTATGACACTGCTGCGCAAATCT
TCTTTGCGCTTGTGGCCGGAGTGGTGGGCGGCATGACCGCCGCGTGGGGGCCGCCGATGGCGATGTACCTGCACACCAAA
GGCGTCGATAAGGATGAGTTCATTCGCGCCACTGGGTTTATGATCTCGGTCGGGTCACTCCCGCTTGTGGTGACTTACGC
GCAGGTCGGGTTTTTATCTGGTGAACTTGCCGCGATCTCATTTTCCATGCTGCTGCCGACCCTGATTGGCTTTACCGCCG
GGGAAATTCTGCGCCGCAAGATGTCCATCGAAGCCTTTCGCAACGCCATCCTGATCCTGTTCTTCTTTCTGGGTCTGAAC
CTGATCCGCCGGGCAATCTGGTACGTCTAA

Upstream 100 bases:

>100_bases
CAGTCGATGAAGGCTCAGATCAGTTTTGCCTGACTTCCTGACATCCTTGCGCGCACCAAGCAGTGTTGCGAGCCGCTGCC
CGGCGTGGAACGGGTAAACG

Downstream 100 bases:

>100_bases
TGGCGATCAAGTTGTAAATTCGTCATAGTACCACTCGCCTGCTCCGCGCCTCTGCGCTAGCCTTGAGGCAAATCAGCAAG
GGGATCACAGCCGTGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDLTMLIVIAGFAFLVSGAIKGVTGIGLPTAAIAFMTLFLDPRTAIALVLFPMLGSNLWQMLRGGLLKRTARRYWLFAAV
LFLGVGTTAIMTQTTSDRALLAILGIVVLIFVAVSWRKLLPPLADRYDTAAQIFFALVAGVVGGMTAAWGPPMAMYLHTK
GVDKDEFIRATGFMISVGSLPLVVTYAQVGFLSGELAAISFSMLLPTLIGFTAGEILRRKMSIEAFRNAILILFFFLGLN
LIRRAIWYV

Sequences:

>Translated_249_residues
MDLTMLIVIAGFAFLVSGAIKGVTGIGLPTAAIAFMTLFLDPRTAIALVLFPMLGSNLWQMLRGGLLKRTARRYWLFAAV
LFLGVGTTAIMTQTTSDRALLAILGIVVLIFVAVSWRKLLPPLADRYDTAAQIFFALVAGVVGGMTAAWGPPMAMYLHTK
GVDKDEFIRATGFMISVGSLPLVVTYAQVGFLSGELAAISFSMLLPTLIGFTAGEILRRKMSIEAFRNAILILFFFLGLN
LIRRAIWYV
>Mature_249_residues
MDLTMLIVIAGFAFLVSGAIKGVTGIGLPTAAIAFMTLFLDPRTAIALVLFPMLGSNLWQMLRGGLLKRTARRYWLFAAV
LFLGVGTTAIMTQTTSDRALLAILGIVVLIFVAVSWRKLLPPLADRYDTAAQIFFALVAGVVGGMTAAWGPPMAMYLHTK
GVDKDEFIRATGFMISVGSLPLVVTYAQVGFLSGELAAISFSMLLPTLIGFTAGEILRRKMSIEAFRNAILILFFFLGLN
LIRRAIWYV

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27046; Mature: 27046

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTMLIVIAGFAFLVSGAIKGVTGIGLPTAAIAFMTLFLDPRTAIALVLFPMLGSNLWQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MLRGGLLKRTARRYWLFAAVLFLGVGTTAIMTQTTSDRALLAILGIVVLIFVAVSWRKLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
PPLADRYDTAAQIFFALVAGVVGGMTAAWGPPMAMYLHTKGVDKDEFIRATGFMISVGSL
CHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCHHHHHHHHHHEEEECCC
PLVVTYAQVGFLSGELAAISFSMLLPTLIGFTAGEILRRKMSIEAFRNAILILFFFLGLN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIRRAIWYV
HHHHHHHCC
>Mature Secondary Structure
MDLTMLIVIAGFAFLVSGAIKGVTGIGLPTAAIAFMTLFLDPRTAIALVLFPMLGSNLWQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MLRGGLLKRTARRYWLFAAVLFLGVGTTAIMTQTTSDRALLAILGIVVLIFVAVSWRKLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
PPLADRYDTAAQIFFALVAGVVGGMTAAWGPPMAMYLHTKGVDKDEFIRATGFMISVGSL
CHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCHHHHHHHHHHEEEECCC
PLVVTYAQVGFLSGELAAISFSMLLPTLIGFTAGEILRRKMSIEAFRNAILILFFFLGLN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIRRAIWYV
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA