Click here to switch to the map view.

The map label for this gene is cobC [C]

Identifier: 110678428

GI number: 110678428

Start: 1041960

End: 1042544

Strand: Reverse

Name: cobC [C]

Synonym: RD1_1092

Alternate gene names: 110678428

Gene position: 1042544-1041960 (Counterclockwise)

Preceding gene: 110678429

Following gene: 110678427

Centisome position: 25.22

GC content: 66.15

Gene sequence:

>585_bases
ATGATCAGGCTCGCCCTCATTCGCCACGGCCACACCGCATGGAACCGGGCAGGCCGTATTCAGGGGCGCACGGACATCCC
ACTGGATCCGGAGGCGCGGGCCGGGCTTGCCACGCGCGTCCTGCCGAAGCCGTGGTGCGATGCGGCGCTTGTGTCCAGCC
CCCTGATGCGTGCCGTGGAAACCGCGGAACTGATCAGCGGCAAAACCCCGGTCACGATACCGGCACTGATGGAAATGGAC
TGGGGTGCGTGGGAAGGAAAGCGCGGGGAGGCGTTGCTGGCCGATCCCGACACCGATTACCGCCATATCGAAGCCTGGGG
GTGGGAATATCGCCCCCCCGGCGGAGAAAGCCCGGCAGATGTGAGCGCGCGCCTGACCCCATGGGTCAACCGCCTTGCCA
CGGACACGGTCGCCGTCTGTCACATCGGGATCATGCGCGTGTTGATGGCCAAGGCCACGGGCTGGAACTTTGACGGTGCC
GCCCCTTTCCGCATCAAACGGGACCGCCTGTTTATCCTGAACATCTCTGACGCGGGCTGGACGGTGGCAGGCGATCCCGT
TCGTCTTGAGGCGCGCGCCCGGTGA

Upstream 100 bases:

>100_bases
CGATGCACCTTGGGGCGGCGGCGCGGGCCCATATCGGGACGCATCATCTGTTGAGCGCGGCCAAAGCCACCCTTGAAACC
GCAATTGATGAGATATTGAT

Downstream 100 bases:

>100_bases
AAGTATTCTTCGTGGTGACACATCTGCTTGGCTCGGGGCATTTGTCGCGCACATTGGTGCTGGCCCGCGCACATCTGAAG
GCAGGGCATGAGGTGACACT

Product: phosphoglycerate mutase, putative

Products: NA

Alternate protein names: Phosphoglycerate Mutase Family Protein; Mutase; Phosphoglycerate Mutase Protein; Phosphoglycerate/Bisphosphoglycerate Mutase; Fructose-2 6-Bisphosphatase; Alpha-Ribazole Phosphatase; Phosphoglycerate Mutase-Like Protein; Alpha-Ribazole-5-Phosphate Phosphatase; 7 Alpha-Ribazole-5-Phosphate Phosphatase; Phosphoglycerate Mutase GpmB; Alpha-Ribazole Phosphatase CobC; Phosphotransferase

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIRLALIRHGHTAWNRAGRIQGRTDIPLDPEARAGLATRVLPKPWCDAALVSSPLMRAVETAELISGKTPVTIPALMEMD
WGAWEGKRGEALLADPDTDYRHIEAWGWEYRPPGGESPADVSARLTPWVNRLATDTVAVCHIGIMRVLMAKATGWNFDGA
APFRIKRDRLFILNISDAGWTVAGDPVRLEARAR

Sequences:

>Translated_194_residues
MIRLALIRHGHTAWNRAGRIQGRTDIPLDPEARAGLATRVLPKPWCDAALVSSPLMRAVETAELISGKTPVTIPALMEMD
WGAWEGKRGEALLADPDTDYRHIEAWGWEYRPPGGESPADVSARLTPWVNRLATDTVAVCHIGIMRVLMAKATGWNFDGA
APFRIKRDRLFILNISDAGWTVAGDPVRLEARAR
>Mature_194_residues
MIRLALIRHGHTAWNRAGRIQGRTDIPLDPEARAGLATRVLPKPWCDAALVSSPLMRAVETAELISGKTPVTIPALMEMD
WGAWEGKRGEALLADPDTDYRHIEAWGWEYRPPGGESPADVSARLTPWVNRLATDTVAVCHIGIMRVLMAKATGWNFDGA
APFRIKRDRLFILNISDAGWTVAGDPVRLEARAR

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.73 [C]

Molecular weight: Translated: 21440; Mature: 21440

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLALIRHGHTAWNRAGRIQGRTDIPLDPEARAGLATRVLPKPWCDAALVSSPLMRAVE
CEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
TAELISGKTPVTIPALMEMDWGAWEGKRGEALLADPDTDYRHIEAWGWEYRPPGGESPAD
HHHHHCCCCCEEEHHEEECCCCCCCCCCCCEEEECCCCCCEEEEECCCEECCCCCCCCCC
VSARLTPWVNRLATDTVAVCHIGIMRVLMAKATGWNFDGAAPFRIKRDRLFILNISDAGW
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCC
TVAGDPVRLEARAR
EECCCCEEEEEECC
>Mature Secondary Structure
MIRLALIRHGHTAWNRAGRIQGRTDIPLDPEARAGLATRVLPKPWCDAALVSSPLMRAVE
CEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
TAELISGKTPVTIPALMEMDWGAWEGKRGEALLADPDTDYRHIEAWGWEYRPPGGESPAD
HHHHHCCCCCEEEHHEEECCCCCCCCCCCCEEEECCCCCCEEEEECCCEECCCCCCCCCC
VSARLTPWVNRLATDTVAVCHIGIMRVLMAKATGWNFDGAAPFRIKRDRLFILNISDAGW
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEECCCCC
TVAGDPVRLEARAR
EECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA