Click here to switch to the map view.

The map label for this gene is 110678427

Identifier: 110678427

GI number: 110678427

Start: 1040815

End: 1041963

Strand: Reverse

Name: 110678427

Synonym: RD1_1090

Alternate gene names: NA

Gene position: 1041963-1040815 (Counterclockwise)

Preceding gene: 110678428

Following gene: 110678426

Centisome position: 25.21

GC content: 59.27

Gene sequence:

>1149_bases
GTGAAAGTATTCTTCGTGGTGACACATCTGCTTGGCTCGGGGCATTTGTCGCGCACATTGGTGCTGGCCCGCGCACATCT
GAAGGCAGGGCATGAGGTGACACTGATCTCCGGCGGCATGCCCGTGCCTCACCTGTCTCATGACGGTATTACGCTGGTGC
AATTGCCCGCCTTGCGGTCCGATGGCGTGAATTTCACCCGCCTGCTTGATGACAAAGGGGATGTCGCGTCTGAAACGCTG
ATGCGGGATCGTCGCGAAAAGCTGCTGAGCACATTTGAAGAGGCTGCTCCAGATGTGCTTGTCACCGAATTGTTTCCCTT
TGGCCGGCGCAGTTTGAGCGATGAGTTTCTGGCACTGCTCAACATGGCCAAGGCACGCAAAAACCCACCGCGCATTTGCT
GTTCGATCCGCGATATTCTGGCACCGCCTTCCAAACCCTCCAAGGCTGCACGCGTCCGTGACATCATCACGGAGTTTTAC
GACGCGATCATTGTGCATTCCGATCCCGATGTGACACCGCTGGCGGCAAGCTGGCCCGTCACCGAAGATATTGCGGAAAA
ACTCAGATACAGCGGATTTGTCGCAAACCCGCCCGCCCCCATGCACCCAGATGCACCGGGCCAAGGCGAAGTACTCGTCA
GCGCTGGCGGGGGGGCCGTTGGCGATGCGCTTTATGCTGCTGCCTTGGGCGCTGCGAAACTGAACGGCGATCTGCATTGG
CGTGTTTTGGTTGGTGGTGCGGATGCACCCGCAAAATGCGCGGCACTGAAAGAAGGATGCCCGGCAAATACCACCATCGA
ACCCGCCCGACCGGATTTTCGCCAGATGCTGCACCGCGCAAAAGCCTCCGTATCTATGTGCGGCTACAACACGGCGCTCG
ATATCCTGCAGTCCGGAACACCCGCAGTTTTCGTCCCCTTTGATGCGGGCGGCGAGGTGGAGCAATCCCTGCGCGCCTCG
GCACTTGCCAAAATGGCGGGCATACGCGTTGTGAACTCTGTGGACCTGCAACCCGAGGCACTTTTGAACACCGTGCATTC
TGTCGTGCAAGATCCGCGACGGGGTCCGCAAACGCGGGGCCTTGATGGGGCAAGCCGCACGGCCGAACTGCTCGAAACGC
TGGTTGAGGCATCGGGCCATGCAGGTTGA

Upstream 100 bases:

>100_bases
CCCCTTTCCGCATCAAACGGGACCGCCTGTTTATCCTGAACATCTCTGACGCGGGCTGGACGGTGGCAGGCGATCCCGTT
CGTCTTGAGGCGCGCGCCCG

Downstream 100 bases:

>100_bases
CTGGACCCCGCTGCGCCGTGAATTGGCGCGCCACAGGGCCAATGGCATGGCCCTGCGCTTCTGGTGGCGCGATGATGATC
GCTACGAAACCAACTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyltransferase Protein; Glycosyltransferase Family; Glycosyl Transferase-Like Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKVFFVVTHLLGSGHLSRTLVLARAHLKAGHEVTLISGGMPVPHLSHDGITLVQLPALRSDGVNFTRLLDDKGDVASETL
MRDRREKLLSTFEEAAPDVLVTELFPFGRRSLSDEFLALLNMAKARKNPPRICCSIRDILAPPSKPSKAARVRDIITEFY
DAIIVHSDPDVTPLAASWPVTEDIAEKLRYSGFVANPPAPMHPDAPGQGEVLVSAGGGAVGDALYAAALGAAKLNGDLHW
RVLVGGADAPAKCAALKEGCPANTTIEPARPDFRQMLHRAKASVSMCGYNTALDILQSGTPAVFVPFDAGGEVEQSLRAS
ALAKMAGIRVVNSVDLQPEALLNTVHSVVQDPRRGPQTRGLDGASRTAELLETLVEASGHAG

Sequences:

>Translated_382_residues
MKVFFVVTHLLGSGHLSRTLVLARAHLKAGHEVTLISGGMPVPHLSHDGITLVQLPALRSDGVNFTRLLDDKGDVASETL
MRDRREKLLSTFEEAAPDVLVTELFPFGRRSLSDEFLALLNMAKARKNPPRICCSIRDILAPPSKPSKAARVRDIITEFY
DAIIVHSDPDVTPLAASWPVTEDIAEKLRYSGFVANPPAPMHPDAPGQGEVLVSAGGGAVGDALYAAALGAAKLNGDLHW
RVLVGGADAPAKCAALKEGCPANTTIEPARPDFRQMLHRAKASVSMCGYNTALDILQSGTPAVFVPFDAGGEVEQSLRAS
ALAKMAGIRVVNSVDLQPEALLNTVHSVVQDPRRGPQTRGLDGASRTAELLETLVEASGHAG
>Mature_382_residues
MKVFFVVTHLLGSGHLSRTLVLARAHLKAGHEVTLISGGMPVPHLSHDGITLVQLPALRSDGVNFTRLLDDKGDVASETL
MRDRREKLLSTFEEAAPDVLVTELFPFGRRSLSDEFLALLNMAKARKNPPRICCSIRDILAPPSKPSKAARVRDIITEFY
DAIIVHSDPDVTPLAASWPVTEDIAEKLRYSGFVANPPAPMHPDAPGQGEVLVSAGGGAVGDALYAAALGAAKLNGDLHW
RVLVGGADAPAKCAALKEGCPANTTIEPARPDFRQMLHRAKASVSMCGYNTALDILQSGTPAVFVPFDAGGEVEQSLRAS
ALAKMAGIRVVNSVDLQPEALLNTVHSVVQDPRRGPQTRGLDGASRTAELLETLVEASGHAG

Specific function: Unknown

COG id: COG4671

COG function: function code R; Predicted glycosyl transferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40581; Mature: 40581

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFFVVTHLLGSGHLSRTLVLARAHLKAGHEVTLISGGMPVPHLSHDGITLVQLPALRS
CEEEEEEHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCC
DGVNFTRLLDDKGDVASETLMRDRREKLLSTFEEAAPDVLVTELFPFGRRSLSDEFLALL
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHH
NMAKARKNPPRICCSIRDILAPPSKPSKAARVRDIITEFYDAIIVHSDPDVTPLAASWPV
HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC
TEDIAEKLRYSGFVANPPAPMHPDAPGQGEVLVSAGGGAVGDALYAAALGAAKLNGDLHW
HHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
RVLVGGADAPAKCAALKEGCPANTTIEPARPDFRQMLHRAKASVSMCGYNTALDILQSGT
EEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PAVFVPFDAGGEVEQSLRASALAKMAGIRVVNSVDLQPEALLNTVHSVVQDPRRGPQTRG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
LDGASRTAELLETLVEASGHAG
CCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVFFVVTHLLGSGHLSRTLVLARAHLKAGHEVTLISGGMPVPHLSHDGITLVQLPALRS
CEEEEEEHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCC
DGVNFTRLLDDKGDVASETLMRDRREKLLSTFEEAAPDVLVTELFPFGRRSLSDEFLALL
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHH
NMAKARKNPPRICCSIRDILAPPSKPSKAARVRDIITEFYDAIIVHSDPDVTPLAASWPV
HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC
TEDIAEKLRYSGFVANPPAPMHPDAPGQGEVLVSAGGGAVGDALYAAALGAAKLNGDLHW
HHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
RVLVGGADAPAKCAALKEGCPANTTIEPARPDFRQMLHRAKASVSMCGYNTALDILQSGT
EEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PAVFVPFDAGGEVEQSLRASALAKMAGIRVVNSVDLQPEALLNTVHSVVQDPRRGPQTRG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
LDGASRTAELLETLVEASGHAG
CCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA