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The map label for this gene is 110678422

Identifier: 110678422

GI number: 110678422

Start: 1038887

End: 1039201

Strand: Direct

Name: 110678422

Synonym: RD1_1084

Alternate gene names: NA

Gene position: 1038887-1039201 (Clockwise)

Preceding gene: 110678421

Following gene: 110678432

Centisome position: 25.14

GC content: 62.22

Gene sequence:

>315_bases
ATGGATGTTCAGTTTCACAAACAGACACTTTTGAGCCGCCGTGCGTCTCTCGTGGGGGATTTGTCCGACATCGAACAGGC
GCTGGATGCGCCCATGCCGCAAGACTGGGAAGACCGCGCCACTGAACGTCAGGGCGATGAAGTTCTCGAAGCCATGGGGC
AGGTCGAAATCGCCGAACTCCGGCGCATTGACGCCGCGCTGAGCCGCATCGAGGACGGCACCTATGGCACATGTCTGTCC
TGCGGCGACCGGATTTCCGACGCGCGCCTGATGGCCGTGCCGGATGCGGCGCTCTGCCGGAACTGCGCGAAATAG

Upstream 100 bases:

>100_bases
GCCGGCCTCCTATATTCTGGCGGGTAAAATCACAGGGTAGCCTGCCCGCGCACAAAACGATGCGCCGCGTGTTGCGCGCG
GATCACGAAAGGGGGTTTTC

Downstream 100 bases:

>100_bases
CAGCGCGCGCCGCAGGTAAAACTCCGGCGCGACGAGGTGTTCTTAGATCGCTTCGTCGAGCGCTTCGCCCGCGTTTTGTA
CGTCGCGGCCAAGGCCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDVQFHKQTLLSRRASLVGDLSDIEQALDAPMPQDWEDRATERQGDEVLEAMGQVEIAELRRIDAALSRIEDGTYGTCLS
CGDRISDARLMAVPDAALCRNCAK

Sequences:

>Translated_104_residues
MDVQFHKQTLLSRRASLVGDLSDIEQALDAPMPQDWEDRATERQGDEVLEAMGQVEIAELRRIDAALSRIEDGTYGTCLS
CGDRISDARLMAVPDAALCRNCAK
>Mature_104_residues
MDVQFHKQTLLSRRASLVGDLSDIEQALDAPMPQDWEDRATERQGDEVLEAMGQVEIAELRRIDAALSRIEDGTYGTCLS
CGDRISDARLMAVPDAALCRNCAK

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 11495; Mature: 11495

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQFHKQTLLSRRASLVGDLSDIEQALDAPMPQDWEDRATERQGDEVLEAMGQVEIAEL
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHH
RRIDAALSRIEDGTYGTCLSCGDRISDARLMAVPDAALCRNCAK
HHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEECCCHHHHHHCCC
>Mature Secondary Structure
MDVQFHKQTLLSRRASLVGDLSDIEQALDAPMPQDWEDRATERQGDEVLEAMGQVEIAEL
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHH
RRIDAALSRIEDGTYGTCLSCGDRISDARLMAVPDAALCRNCAK
HHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]