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The map label for this gene is 110678415

Identifier: 110678415

GI number: 110678415

Start: 1032815

End: 1034092

Strand: Reverse

Name: 110678415

Synonym: RD1_1077

Alternate gene names: NA

Gene position: 1034092-1032815 (Counterclockwise)

Preceding gene: 110678417

Following gene: 110678414

Centisome position: 25.02

GC content: 57.51

Gene sequence:

>1278_bases
ATGTGCTGCGCCCTCATTTTGAGACCACCCTACAGATTGCCAAACGCGGCGCAACTTGTTCAGTACCTCCGCCCCAACCC
AAGTCGAAAAAACCTAATGCCCGTGGGCAGCTTTGCTTTTACGTGTCGCGTTTTTCGCGGTAGGGTTGTTTCAGAGCGGC
TCCGAATTTCGTTTCTGAAAGGTCTGAACATCATGACAGTCTCCCTCCCTTCCCGTCTTGGCCTTGTGTCTGCCCTTGCC
TTGGGTGCGCCGCATATTGCCGCCGCGGACCCGACGTTTGATTTCTATGGGCAGCTTAACTTTGGTGTCTTCAGCGTCGA
TGACGGGACGGAGGATGAGACGTTCTTTACCGACAACGACAATTCCAACACCCGCGTGGGCGCGATTTACTCGAACAATC
TTGCGGGCGGTTCCACGGTCAAGTTCCACTTTGAAACCGCGCTTGGGTTCGCCGGGTCGAGTTCTGCGACCATGGATGAC
AACGATCTCGACCTCGACATCGCGCGCACGGATCTGCGTAAGCTCGAATTGATCTATGCCACGCCGGGCTTGGGAACGCT
CAGTTTCGGGCAGGGCAGCACCGCGTCGGACGGCGTGGCGGAGGCGGATTTTTCAGGCACCTCGGTCATTGCCTATTCCG
GCATTTCAGACCTTGCAGGCAGCTTTCAGTACCGGCCCGACGGCGGCGCGCTGTCGGGCATCGCCATTGGCGACACGTTC
AAATCCTTTGACGGCTCGCGCCGCTTCCGGCTGCGCTATGACACGCCCTCGTGGAACAACTTCGTCTTTAGCATCTCGGG
GGGTGAAGAGGTTCTGGATCGCGACAACGACAGTGAATACTACGATGTTGCGGCCAAATACACGGCTGACTATGGCGACA
TGAAAGTGGATGGCCGCCTCGGGTACGAGTGGATCAGCGGCGGCGAAGAACTGTTGGTCGGCTCGTTCGCCCTCCTGCAC
AAGCCCACGGGCGTCAGCCTTGCCCTGTCGGCAGGGGCCGAGCAGGAAGGCGATGCCGAGTATATCTACGCCAAACTGGG
GTATCAGCAGGATTGGTTTGCCCTTGGCACCACGGCGTTGTCGCTGGATCTGTTCGAGGGCAATGATTACGCAATCGACG
GATCAGACAGTTCATCCGTGGGGATCGCCGCGGTTCAAAAGGTCGATGCCTATAACCTTGAGCTTTATGCCATTTACCGC
ACCCATGAATTTGACGCCTCGGGCACGGATTTCGATGACATTGATGCAATGGCAGTCGGCGCGCGCTGGAAATTCTGA

Upstream 100 bases:

>100_bases
CGAGTTAAACGGCGGATCAACGTAAATCAGATCGACGCTTTCATCCGCGATGCTGTCACGCAGCACCGCCAGATTATCGC
CGTAATAGAGATGATTTGCC

Downstream 100 bases:

>100_bases
AACTCGGCATCATGTCCTGCAGCGGGCGCGGATGAATTGCGCCTGCGATGCGGATACGGCATATGGGGGCTATGATGTAT
TGTAGGACGAAACCATCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MCCALILRPPYRLPNAAQLVQYLRPNPSRKNLMPVGSFAFTCRVFRGRVVSERLRISFLKGLNIMTVSLPSRLGLVSALA
LGAPHIAAADPTFDFYGQLNFGVFSVDDGTEDETFFTDNDNSNTRVGAIYSNNLAGGSTVKFHFETALGFAGSSSATMDD
NDLDLDIARTDLRKLELIYATPGLGTLSFGQGSTASDGVAEADFSGTSVIAYSGISDLAGSFQYRPDGGALSGIAIGDTF
KSFDGSRRFRLRYDTPSWNNFVFSISGGEEVLDRDNDSEYYDVAAKYTADYGDMKVDGRLGYEWISGGEELLVGSFALLH
KPTGVSLALSAGAEQEGDAEYIYAKLGYQQDWFALGTTALSLDLFEGNDYAIDGSDSSSVGIAAVQKVDAYNLELYAIYR
THEFDASGTDFDDIDAMAVGARWKF

Sequences:

>Translated_425_residues
MCCALILRPPYRLPNAAQLVQYLRPNPSRKNLMPVGSFAFTCRVFRGRVVSERLRISFLKGLNIMTVSLPSRLGLVSALA
LGAPHIAAADPTFDFYGQLNFGVFSVDDGTEDETFFTDNDNSNTRVGAIYSNNLAGGSTVKFHFETALGFAGSSSATMDD
NDLDLDIARTDLRKLELIYATPGLGTLSFGQGSTASDGVAEADFSGTSVIAYSGISDLAGSFQYRPDGGALSGIAIGDTF
KSFDGSRRFRLRYDTPSWNNFVFSISGGEEVLDRDNDSEYYDVAAKYTADYGDMKVDGRLGYEWISGGEELLVGSFALLH
KPTGVSLALSAGAEQEGDAEYIYAKLGYQQDWFALGTTALSLDLFEGNDYAIDGSDSSSVGIAAVQKVDAYNLELYAIYR
THEFDASGTDFDDIDAMAVGARWKF
>Mature_425_residues
MCCALILRPPYRLPNAAQLVQYLRPNPSRKNLMPVGSFAFTCRVFRGRVVSERLRISFLKGLNIMTVSLPSRLGLVSALA
LGAPHIAAADPTFDFYGQLNFGVFSVDDGTEDETFFTDNDNSNTRVGAIYSNNLAGGSTVKFHFETALGFAGSSSATMDD
NDLDLDIARTDLRKLELIYATPGLGTLSFGQGSTASDGVAEADFSGTSVIAYSGISDLAGSFQYRPDGGALSGIAIGDTF
KSFDGSRRFRLRYDTPSWNNFVFSISGGEEVLDRDNDSEYYDVAAKYTADYGDMKVDGRLGYEWISGGEELLVGSFALLH
KPTGVSLALSAGAEQEGDAEYIYAKLGYQQDWFALGTTALSLDLFEGNDYAIDGSDSSSVGIAAVQKVDAYNLELYAIYR
THEFDASGTDFDDIDAMAVGARWKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45974; Mature: 45974

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCCALILRPPYRLPNAAQLVQYLRPNPSRKNLMPVGSFAFTCRVFRGRVVSERLRISFLK
CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEECCCHHEEEEHHHCHHHHHHHHHHHHC
GLNIMTVSLPSRLGLVSALALGAPHIAAADPTFDFYGQLNFGVFSVDDGTEDETFFTDND
CCEEEEEECCCHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEEEEECCCCCCCEEEECCC
NSNTRVGAIYSNNLAGGSTVKFHFETALGFAGSSSATMDDNDLDLDIARTDLRKLELIYA
CCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEE
TPGLGTLSFGQGSTASDGVAEADFSGTSVIAYSGISDLAGSFQYRPDGGALSGIAIGDTF
CCCCCEEECCCCCCCCCCCEECCCCCCEEEEECCHHHHCCCEEECCCCCCEEEEEECCCH
KSFDGSRRFRLRYDTPSWNNFVFSISGGEEVLDRDNDSEYYDVAAKYTADYGDMKVDGRL
HCCCCCEEEEEEECCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEEECCCCCEEECCEE
GYEWISGGEELLVGSFALLHKPTGVSLALSAGAEQEGDAEYIYAKLGYQQDWFALGTTAL
CHHHHCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEECEEEE
SLDLFEGNDYAIDGSDSSSVGIAAVQKVDAYNLELYAIYRTHEFDASGTDFDDIDAMAVG
EEEEECCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEC
ARWKF
CEECC
>Mature Secondary Structure
MCCALILRPPYRLPNAAQLVQYLRPNPSRKNLMPVGSFAFTCRVFRGRVVSERLRISFLK
CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEECCCHHEEEEHHHCHHHHHHHHHHHHC
GLNIMTVSLPSRLGLVSALALGAPHIAAADPTFDFYGQLNFGVFSVDDGTEDETFFTDND
CCEEEEEECCCHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEEEEECCCCCCCEEEECCC
NSNTRVGAIYSNNLAGGSTVKFHFETALGFAGSSSATMDDNDLDLDIARTDLRKLELIYA
CCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEE
TPGLGTLSFGQGSTASDGVAEADFSGTSVIAYSGISDLAGSFQYRPDGGALSGIAIGDTF
CCCCCEEECCCCCCCCCCCEECCCCCCEEEEECCHHHHCCCEEECCCCCCEEEEEECCCH
KSFDGSRRFRLRYDTPSWNNFVFSISGGEEVLDRDNDSEYYDVAAKYTADYGDMKVDGRL
HCCCCCEEEEEEECCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEEECCCCCEEECCEE
GYEWISGGEELLVGSFALLHKPTGVSLALSAGAEQEGDAEYIYAKLGYQQDWFALGTTAL
CHHHHCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEECEEEE
SLDLFEGNDYAIDGSDSSSVGIAAVQKVDAYNLELYAIYRTHEFDASGTDFDDIDAMAVG
EEEEECCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEC
ARWKF
CEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA