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The map label for this gene is 110678340

Identifier: 110678340

GI number: 110678340

Start: 960096

End: 960785

Strand: Direct

Name: 110678340

Synonym: RD1_0996

Alternate gene names: NA

Gene position: 960096-960785 (Clockwise)

Preceding gene: 110678338

Following gene: 110678341

Centisome position: 23.23

GC content: 64.06

Gene sequence:

>690_bases
ATGAACGATCCGTTTCTGCCCGGCGACCCGCCTGTCCCGCTGATCCTGCGCCGCTCTGGGCGGGCGCGGCGAATCTCCCT
GCGCATTTCGCAACTGGACGGTCGTGTGACGCTGACGCTGCCAAATCATGTTCCGGAACGCGAGGCCATCGGATTCGCGC
AGGAAAAAGAGACATGGATTCGCAAGCATCTGGCCAACCGGGCGGAAAATGTCGACGTGGGCCATGGTGTCGTGCTGCCG
ATCGGTGGTGTGCCGCATGAGGTGACTGAAGGCGCGGGGCGCAGGATCAGTTTTGCGGCGGGTAAAGTGCATGTGCCCGG
CGCGTCTGATCGTGTGGGCCGGCGTCTTGGCGGCCATCTCAAGGCGCTTGCCAGAACTCGCCTCGCGCAAGCGTCGGATC
ACTATGCTGCGCGGCTGGGAAAACCCTATGCCGCGATCACGCTGCGGGACACACGGTCGCGCTGGGGTTCCTGCACGGCG
CAGGGGCGGTTGATGTATTCATGGCGTCTGATTCTGGCCCCGCCGGAGGTTCTGGAGTATGTGGCCGCCCATGAAGTGGC
GCATCTTGCACAGATGAACCACTCGCCTGCCTTTTGGGCGGAGGTCGAGCGGATTTACGGCGATTACGCTGCTGCAAGGA
CCTGGCTGCGCCGCGAAGGGGGCGCGCTGCATCGCTACCGGTTCGGGTGA

Upstream 100 bases:

>100_bases
AGATGATTGGAGCGCAAGTGCCATATGAGGCGGGGTCTGTAAAGACCTGCCGCGTGTGGCACAGCCCGTGACCCGTGATT
ATCGTAATTAGAGCAAGCAT

Downstream 100 bases:

>100_bases
TTTTCAGGCCGGGACTTGACGGCCCGGGTCACGTGATCACAAATGCAGCATGATCTTGAATCCACGCCCCGCAGATGCGA
CGCCCGTTGCCCATGACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Zinc Metallopeptidase-Like Protein; Hydrolase; Zinc Metallopeptidase Protein; Protease

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNDPFLPGDPPVPLILRRSGRARRISLRISQLDGRVTLTLPNHVPEREAIGFAQEKETWIRKHLANRAENVDVGHGVVLP
IGGVPHEVTEGAGRRISFAAGKVHVPGASDRVGRRLGGHLKALARTRLAQASDHYAARLGKPYAAITLRDTRSRWGSCTA
QGRLMYSWRLILAPPEVLEYVAAHEVAHLAQMNHSPAFWAEVERIYGDYAAARTWLRREGGALHRYRFG

Sequences:

>Translated_229_residues
MNDPFLPGDPPVPLILRRSGRARRISLRISQLDGRVTLTLPNHVPEREAIGFAQEKETWIRKHLANRAENVDVGHGVVLP
IGGVPHEVTEGAGRRISFAAGKVHVPGASDRVGRRLGGHLKALARTRLAQASDHYAARLGKPYAAITLRDTRSRWGSCTA
QGRLMYSWRLILAPPEVLEYVAAHEVAHLAQMNHSPAFWAEVERIYGDYAAARTWLRREGGALHRYRFG
>Mature_229_residues
MNDPFLPGDPPVPLILRRSGRARRISLRISQLDGRVTLTLPNHVPEREAIGFAQEKETWIRKHLANRAENVDVGHGVVLP
IGGVPHEVTEGAGRRISFAAGKVHVPGASDRVGRRLGGHLKALARTRLAQASDHYAARLGKPYAAITLRDTRSRWGSCTA
QGRLMYSWRLILAPPEVLEYVAAHEVAHLAQMNHSPAFWAEVERIYGDYAAARTWLRREGGALHRYRFG

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25478; Mature: 25478

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDPFLPGDPPVPLILRRSGRARRISLRISQLDGRVTLTLPNHVPEREAIGFAQEKETWI
CCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHCCHHHHHHHH
RKHLANRAENVDVGHGVVLPIGGVPHEVTEGAGRRISFAAGKVHVPGASDRVGRRLGGHL
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEECCEEECCCCCHHHHHHHHHHH
KALARTRLAQASDHYAARLGKPYAAITLRDTRSRWGSCTAQGRLMYSWRLILAPPEVLEY
HHHHHHHHHHCCHHHHHHCCCCEEEEEEECCHHHCCCCCCCCEEEEEEEEEECCHHHHHH
VAAHEVAHLAQMNHSPAFWAEVERIYGDYAAARTWLRREGGALHRYRFG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNDPFLPGDPPVPLILRRSGRARRISLRISQLDGRVTLTLPNHVPEREAIGFAQEKETWI
CCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCEEEEEECCCCCCHHHHCCHHHHHHHH
RKHLANRAENVDVGHGVVLPIGGVPHEVTEGAGRRISFAAGKVHVPGASDRVGRRLGGHL
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEECCEEECCCCCHHHHHHHHHHH
KALARTRLAQASDHYAARLGKPYAAITLRDTRSRWGSCTAQGRLMYSWRLILAPPEVLEY
HHHHHHHHHHCCHHHHHHCCCCEEEEEEECCHHHCCCCCCCCEEEEEEEEEECCHHHHHH
VAAHEVAHLAQMNHSPAFWAEVERIYGDYAAARTWLRREGGALHRYRFG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA