| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110678275
Identifier: 110678275
GI number: 110678275
Start: 898424
End: 899206
Strand: Direct
Name: 110678275
Synonym: RD1_0928
Alternate gene names: NA
Gene position: 898424-899206 (Clockwise)
Preceding gene: 110678272
Following gene: 110678276
Centisome position: 21.74
GC content: 61.69
Gene sequence:
>783_bases ATGAAACTCGATGATGCCTATGCCAATGCAGCCTATATTCCGCAGGCGGCGCAGTATCCACCGCGCTGGTCAGAGGCGGC CGCCGCCTTTCGTGAGGCGATGGGGGCGCGCGCCGACCTTGGTGTGTCCTACGGGCCAAGTGCGCGGCAGGCCTATGATC TGTTTTACGCCGAGGGTCCGGCTCATGGGACGATGGTTTTCGTGCATGGGGGCTACTGGCTGAAATTCGGACGGTCCATG TGGTCGCATTTCGCCAAGGGCGCATTGGCGCGCAATTGGAATGTGGCGATGGTCGAATATGATCTGTGCCCCGATGTGAC GATTGCGCAGATCACCCGACAGGTCGCACTGGCGGTCACGTCGCTTGCGGCGCGGCTCGACGGCCCGATGACCCTGAGCG GTCATTCGGCGGGCGGGCATCTGGTGGCGCGTATGCTGGCACCGGGGATGCTTTCCCCGGATGTGGCAGCGCGCATTCAA AAGGTCGCACCGATTTCCCCGGTGGCGGACCTGCGGCCTTTGCTTGAAACCTCCATGAACGCGGATTTCAAAATGGACCT CGCCAGTGCTGCTGCCGAAAGCCCCGTTTTGCAACCGCCCCCCGACACGCCGCTGTGCATCTGGGTGGGGGCACAGGAGC GTCCGGTTTTTCTGCTGCAAGCCGCAGCGCTTGCCGCTGCGTGGTCCGTGCCGCAGGTGATCGTTCCGTCAAAACACCAT TTCGATGTGATCGATGCGTTGTGTGATCCCGAAAGTGATATTGTCCGCTATCTGACGCCGTAA
Upstream 100 bases:
>100_bases TTGCAGGCAAGTCTTTCATTTGTCGTTCTCCCGAAAATGGCTGTCGTCTGCATTTCAAGTCTGACAATGATTGTCCAGTT CCACAAAAAAGGAGGCGTGG
Downstream 100 bases:
>100_bases AAAGGCTTGATCGGTGCGCGTGTTTCGGCCAAGAGGCTGTCAGGCTGTGGGCGATGGCGTCGCCCGAGAACCTTCGCCTT GATTGTCCTGAACGCCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Aylformamidase; Lipase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Domain-Containing Protein; Esterase/Lipase/Thiestherase Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGPAHGTMVFVHGGYWLKFGRSM WSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVTSLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQ KVAPISPVADLRPLLETSMNADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH FDVIDALCDPESDIVRYLTP
Sequences:
>Translated_260_residues MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGPAHGTMVFVHGGYWLKFGRSM WSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVTSLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQ KVAPISPVADLRPLLETSMNADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH FDVIDALCDPESDIVRYLTP >Mature_260_residues MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGPAHGTMVFVHGGYWLKFGRSM WSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVTSLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQ KVAPISPVADLRPLLETSMNADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH FDVIDALCDPESDIVRYLTP
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=237, Percent_Identity=24.8945147679325, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI224465228, Length=242, Percent_Identity=24.3801652892562, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI19920830, Length=249, Percent_Identity=28.1124497991968, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27955; Mature: 27955
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGP CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCC AHGTMVFVHGGYWLKFGRSMWSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVT CCCEEEEEECCHHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH SLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQKVAPISPVADLRPLLETSMN HHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC ADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH CCEEEHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCC FDVIDALCDPESDIVRYLTP HHHHHHHHCCHHHHHHCCCC >Mature Secondary Structure MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGP CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCC AHGTMVFVHGGYWLKFGRSMWSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVT CCCEEEEEECCHHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH SLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQKVAPISPVADLRPLLETSMN HHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC ADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH CCEEEHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCC FDVIDALCDPESDIVRYLTP HHHHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA