Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678275

Identifier: 110678275

GI number: 110678275

Start: 898424

End: 899206

Strand: Direct

Name: 110678275

Synonym: RD1_0928

Alternate gene names: NA

Gene position: 898424-899206 (Clockwise)

Preceding gene: 110678272

Following gene: 110678276

Centisome position: 21.74

GC content: 61.69

Gene sequence:

>783_bases
ATGAAACTCGATGATGCCTATGCCAATGCAGCCTATATTCCGCAGGCGGCGCAGTATCCACCGCGCTGGTCAGAGGCGGC
CGCCGCCTTTCGTGAGGCGATGGGGGCGCGCGCCGACCTTGGTGTGTCCTACGGGCCAAGTGCGCGGCAGGCCTATGATC
TGTTTTACGCCGAGGGTCCGGCTCATGGGACGATGGTTTTCGTGCATGGGGGCTACTGGCTGAAATTCGGACGGTCCATG
TGGTCGCATTTCGCCAAGGGCGCATTGGCGCGCAATTGGAATGTGGCGATGGTCGAATATGATCTGTGCCCCGATGTGAC
GATTGCGCAGATCACCCGACAGGTCGCACTGGCGGTCACGTCGCTTGCGGCGCGGCTCGACGGCCCGATGACCCTGAGCG
GTCATTCGGCGGGCGGGCATCTGGTGGCGCGTATGCTGGCACCGGGGATGCTTTCCCCGGATGTGGCAGCGCGCATTCAA
AAGGTCGCACCGATTTCCCCGGTGGCGGACCTGCGGCCTTTGCTTGAAACCTCCATGAACGCGGATTTCAAAATGGACCT
CGCCAGTGCTGCTGCCGAAAGCCCCGTTTTGCAACCGCCCCCCGACACGCCGCTGTGCATCTGGGTGGGGGCACAGGAGC
GTCCGGTTTTTCTGCTGCAAGCCGCAGCGCTTGCCGCTGCGTGGTCCGTGCCGCAGGTGATCGTTCCGTCAAAACACCAT
TTCGATGTGATCGATGCGTTGTGTGATCCCGAAAGTGATATTGTCCGCTATCTGACGCCGTAA

Upstream 100 bases:

>100_bases
TTGCAGGCAAGTCTTTCATTTGTCGTTCTCCCGAAAATGGCTGTCGTCTGCATTTCAAGTCTGACAATGATTGTCCAGTT
CCACAAAAAAGGAGGCGTGG

Downstream 100 bases:

>100_bases
AAAGGCTTGATCGGTGCGCGTGTTTCGGCCAAGAGGCTGTCAGGCTGTGGGCGATGGCGTCGCCCGAGAACCTTCGCCTT
GATTGTCCTGAACGCCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase-Like Protein; Arylformamidase; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Aylformamidase; Lipase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Domain-Containing Protein; Esterase/Lipase/Thiestherase Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGPAHGTMVFVHGGYWLKFGRSM
WSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVTSLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQ
KVAPISPVADLRPLLETSMNADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH
FDVIDALCDPESDIVRYLTP

Sequences:

>Translated_260_residues
MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGPAHGTMVFVHGGYWLKFGRSM
WSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVTSLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQ
KVAPISPVADLRPLLETSMNADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH
FDVIDALCDPESDIVRYLTP
>Mature_260_residues
MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGPAHGTMVFVHGGYWLKFGRSM
WSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVTSLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQ
KVAPISPVADLRPLLETSMNADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH
FDVIDALCDPESDIVRYLTP

Specific function: Unknown

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI192807282, Length=237, Percent_Identity=24.8945147679325, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI224465228, Length=242, Percent_Identity=24.3801652892562, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI19920830, Length=249, Percent_Identity=28.1124497991968, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27955; Mature: 27955

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGP
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCC
AHGTMVFVHGGYWLKFGRSMWSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVT
CCCEEEEEECCHHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
SLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQKVAPISPVADLRPLLETSMN
HHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH
CCEEEHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCC
FDVIDALCDPESDIVRYLTP
HHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MKLDDAYANAAYIPQAAQYPPRWSEAAAAFREAMGARADLGVSYGPSARQAYDLFYAEGP
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCC
AHGTMVFVHGGYWLKFGRSMWSHFAKGALARNWNVAMVEYDLCPDVTIAQITRQVALAVT
CCCEEEEEECCHHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
SLAARLDGPMTLSGHSAGGHLVARMLAPGMLSPDVAARIQKVAPISPVADLRPLLETSMN
HHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ADFKMDLASAAAESPVLQPPPDTPLCIWVGAQERPVFLLQAAALAAAWSVPQVIVPSKHH
CCEEEHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCC
FDVIDALCDPESDIVRYLTP
HHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA