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The map label for this gene is amt-2

Identifier: 110678271

GI number: 110678271

Start: 894348

End: 895721

Strand: Direct

Name: amt-2

Synonym: RD1_0924

Alternate gene names: NA

Gene position: 894348-895721 (Clockwise)

Preceding gene: 110678270

Following gene: 110678272

Centisome position: 21.64

GC content: 56.4

Gene sequence:

>1374_bases
ATGACTCTAGATATCAACGCGATATACGCGGAACAGGTGACGCTGAACTCGCTTGTTCAAAACCTGCTTTACGGGTCTGG
CACGGTCGGTGCGATCCTCGTGGTAGTGGGATTGCTGCTGATTGATGCCGGTACGGCGCGGCGAAAAAACCTGTTCAACT
CGACCATTGAGAAAACACTTGGCTTTTTTATCGGCTTTGCCACCTACTATGTCATCGGCTTCGGTTTCTGGGCCGCACAA
TACTATGTGATGGTGGACGCCACGATCGGGGATTCACTCAAAGACTGGTGGATCGGCGGGGCGATGACCAACGTACTTGC
CCATAACGTAGACCCGGCCGTGTTTCCCGGCCTGAATACCTTCCAGATCTTCATCTTCTTCCTCGCTGTTTTCGCAGGTA
TCATCAACATTCTGCTGCATTTCGCGGTTTCCGAACGGATGAAACCGGCGGCCTTCTACATCACTTGTGTCGTGGCGACG
ATCGTGTCCTCGATCCTGAGTTTCGCGACATGGGGCTCGGTTGGCCCGCTGACGAATGCGGGTTTCCACGACTTCTTTGG
CGTCGGCTTCGTTTACATGTTCCCCGCGGGCATGGCGCTTGCTCTGACGCCGATGCTGGGCAAACGCCCCGGCATGATGG
AGCCGCATGAGCGTGTGTCCGCATACCTCGCCCCAAGCATCGGTCTTGCGGCACCGGGGCTTTTGCTGATCTTTGCCGGT
CTGCCGATGGTGATCCTGTCCTGCCTCTTCTTCTTCGATCCCGAAGCGTTGGCCGTCAGCGTTACCATGGCCGAAACCAG
CGTGGGTGTCGCGCTCAACAACTATGCGCTGGTCTGGGCGGGTGGCGCGATCACCGGGATGTTGATCGCCTATAAGTCCG
GAAACTACGCCTATACCTTGCTTGGACCGCTTGCGGGCTATGTCGCTGGCGCATCGGGCTTTGACGTATACATGCCCTGG
CAGGCGTTCATTCTGGGCCTCGTCGCACCGTTTGGAGCCTATATCGTCTATGAATTCACGCTCAAGCGTGGGATCGACGA
ACACAAGCTGTTTCCGCTCTTCATTGGCGCGGGGTCGGTCGGCATGATTGCACTTGGTCTGTTCAAATCGGGCACGCCAC
GCGGCGGTTATCTTGGCATCGAGGAAGGCGCCTATGCATTTCAGCATGGCGAAATCTCCTTGGTCATGCAGCTGGTCGGA
ACGGCCGTTTGCATCGGCACTGGTTTTGTCACCGCGCTGGTCCTTGGGTTGATCTTCAAAGCGACCATTGGCCTTCGTGT
AGATCATGACGATCAAATCGACGGGCTGGACAACAAATACTGGGGTCTGGAGCCTGACGTAATTACACACGCGGACAATA
CTCCACGCGCCTGA

Upstream 100 bases:

>100_bases
TGGTCTTGCGGTGGTTGGCGGTGGTTGACAGTGCCTCCATCGTATTGCTGACGGACCGGGGCAAAACCCCGGCGATCAAA
CGCCAATAGGGATGGATATA

Downstream 100 bases:

>100_bases
AGCCGCCACGAAGTGATAGGAAGGGGCCCCGGCGTTTTGTCGGGGCCCTTTGTCATTCAGGGTCATGCTATGTTCATGGC
CGACAAAATAGGGTATCGCG

Product: putative ammonium transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTLDINAIYAEQVTLNSLVQNLLYGSGTVGAILVVVGLLLIDAGTARRKNLFNSTIEKTLGFFIGFATYYVIGFGFWAAQ
YYVMVDATIGDSLKDWWIGGAMTNVLAHNVDPAVFPGLNTFQIFIFFLAVFAGIINILLHFAVSERMKPAAFYITCVVAT
IVSSILSFATWGSVGPLTNAGFHDFFGVGFVYMFPAGMALALTPMLGKRPGMMEPHERVSAYLAPSIGLAAPGLLLIFAG
LPMVILSCLFFFDPEALAVSVTMAETSVGVALNNYALVWAGGAITGMLIAYKSGNYAYTLLGPLAGYVAGASGFDVYMPW
QAFILGLVAPFGAYIVYEFTLKRGIDEHKLFPLFIGAGSVGMIALGLFKSGTPRGGYLGIEEGAYAFQHGEISLVMQLVG
TAVCIGTGFVTALVLGLIFKATIGLRVDHDDQIDGLDNKYWGLEPDVITHADNTPRA

Sequences:

>Translated_457_residues
MTLDINAIYAEQVTLNSLVQNLLYGSGTVGAILVVVGLLLIDAGTARRKNLFNSTIEKTLGFFIGFATYYVIGFGFWAAQ
YYVMVDATIGDSLKDWWIGGAMTNVLAHNVDPAVFPGLNTFQIFIFFLAVFAGIINILLHFAVSERMKPAAFYITCVVAT
IVSSILSFATWGSVGPLTNAGFHDFFGVGFVYMFPAGMALALTPMLGKRPGMMEPHERVSAYLAPSIGLAAPGLLLIFAG
LPMVILSCLFFFDPEALAVSVTMAETSVGVALNNYALVWAGGAITGMLIAYKSGNYAYTLLGPLAGYVAGASGFDVYMPW
QAFILGLVAPFGAYIVYEFTLKRGIDEHKLFPLFIGAGSVGMIALGLFKSGTPRGGYLGIEEGAYAFQHGEISLVMQLVG
TAVCIGTGFVTALVLGLIFKATIGLRVDHDDQIDGLDNKYWGLEPDVITHADNTPRA
>Mature_456_residues
TLDINAIYAEQVTLNSLVQNLLYGSGTVGAILVVVGLLLIDAGTARRKNLFNSTIEKTLGFFIGFATYYVIGFGFWAAQY
YVMVDATIGDSLKDWWIGGAMTNVLAHNVDPAVFPGLNTFQIFIFFLAVFAGIINILLHFAVSERMKPAAFYITCVVATI
VSSILSFATWGSVGPLTNAGFHDFFGVGFVYMFPAGMALALTPMLGKRPGMMEPHERVSAYLAPSIGLAAPGLLLIFAGL
PMVILSCLFFFDPEALAVSVTMAETSVGVALNNYALVWAGGAITGMLIAYKSGNYAYTLLGPLAGYVAGASGFDVYMPWQ
AFILGLVAPFGAYIVYEFTLKRGIDEHKLFPLFIGAGSVGMIALGLFKSGTPRGGYLGIEEGAYAFQHGEISLVMQLVGT
AVCIGTGFVTALVLGLIFKATIGLRVDHDDQIDGLDNKYWGLEPDVITHADNTPRA

Specific function: Unknown

COG id: COG0004

COG function: function code P; Ammonia permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ammonium transporter (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001905
- InterPro:   IPR018047 [H]

Pfam domain/function: PF00909 Ammonium_transp [H]

EC number: NA

Molecular weight: Translated: 48869; Mature: 48738

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDINAIYAEQVTLNSLVQNLLYGSGTVGAILVVVGLLLIDAGTARRKNLFNSTIEKTL
CEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GFFIGFATYYVIGFGFWAAQYYVMVDATIGDSLKDWWIGGAMTNVLAHNVDPAVFPGLNT
HHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHH
FQIFIFFLAVFAGIINILLHFAVSERMKPAAFYITCVVATIVSSILSFATWGSVGPLTNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GFHDFFGVGFVYMFPAGMALALTPMLGKRPGMMEPHERVSAYLAPSIGLAAPGLLLIFAG
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
LPMVILSCLFFFDPEALAVSVTMAETSVGVALNNYALVWAGGAITGMLIAYKSGNYAYTL
HHHHHHHHHHHCCCCHHEEEEEEECCHHCEEEECEEEEEECCHHEEEEEEEECCCEEEEE
LGPLAGYVAGASGFDVYMPWQAFILGLVAPFGAYIVYEFTLKRGIDEHKLFPLFIGAGSV
HHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCEEEEEECCCCH
GMIALGLFKSGTPRGGYLGIEEGAYAFQHGEISLVMQLVGTAVCIGTGFVTALVLGLIFK
HHHHHHHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIGLRVDHDDQIDGLDNKYWGLEPDVITHADNTPRA
HHHCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
TLDINAIYAEQVTLNSLVQNLLYGSGTVGAILVVVGLLLIDAGTARRKNLFNSTIEKTL
EEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GFFIGFATYYVIGFGFWAAQYYVMVDATIGDSLKDWWIGGAMTNVLAHNVDPAVFPGLNT
HHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCHH
FQIFIFFLAVFAGIINILLHFAVSERMKPAAFYITCVVATIVSSILSFATWGSVGPLTNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GFHDFFGVGFVYMFPAGMALALTPMLGKRPGMMEPHERVSAYLAPSIGLAAPGLLLIFAG
CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
LPMVILSCLFFFDPEALAVSVTMAETSVGVALNNYALVWAGGAITGMLIAYKSGNYAYTL
HHHHHHHHHHHCCCCHHEEEEEEECCHHCEEEECEEEEEECCHHEEEEEEEECCCEEEEE
LGPLAGYVAGASGFDVYMPWQAFILGLVAPFGAYIVYEFTLKRGIDEHKLFPLFIGAGSV
HHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCEEEEEECCCCH
GMIALGLFKSGTPRGGYLGIEEGAYAFQHGEISLVMQLVGTAVCIGTGFVTALVLGLIFK
HHHHHHHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIGLRVDHDDQIDGLDNKYWGLEPDVITHADNTPRA
HHHCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]