Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is hyuE [H]

Identifier: 110678210

GI number: 110678210

Start: 836023

End: 836706

Strand: Direct

Name: hyuE [H]

Synonym: RD1_0861

Alternate gene names: 110678210

Gene position: 836023-836706 (Clockwise)

Preceding gene: 110678209

Following gene: 110678212

Centisome position: 20.23

GC content: 55.12

Gene sequence:

>684_bases
ATGAAAATCCTGATGATCAACCCGAACACAACCAGTTCCATGACGGATAAAATCGCGATTGCGGCAAGGTCAGTCGCGCG
CCCTGACACGGACATCATCGCCACGAATTCCCAGGATGGACCAGCCAGCATTCAGGGTTTTCTCGATGTGGCCAATTGCA
TCCCCGGCCTGCTGGCCGAGGTGGCGCTGCATAAGGACGTTGATGCCATCGTTGTCGCCTGTTTTGACGACACCGGGGTT
GATGCCGTGCGCACGCTGGTTGACGTGCCGGTCCTCGGCATCGGCGAGGCTGCCTATCATGCCGCCAGTATGATCGCCAA
CAAGTTCAGCGTCATAACAACACTCTCGCGTTCCGTGCCGGGACTGGAAAATAATCTGATGCGCTACGGGTTGGCGCAAA
AATGCGCACGCGTTCGCGCGACAGATATTCCCGTTTTGAAGCTCGAAGAGGGGGATCCGGCGACATTGTTCAAGATAAAG
TCCGAAATTCGCGAAGCGATAGCAGCAGATAATGCCGAGGCAATCGTCTTGGGATGTGCTGGCATGGCGGACCTTATGGC
GCAGCTCAGTGATGAATTTGGGCTTCCGGTTATTGATGGTGTTGCAGCAGGTGTCACCTTTGCCGAAGCGCTTGTGAACA
ACAAATTGCGCACGTCCAAAATCGGAGCCTACTCGGGCCAATAA

Upstream 100 bases:

>100_bases
GATGGCCACCGGCAACGTAGTCATCGAAGGCAATTCCAAAGATTTGCTGCATGATGACCGGATCAAGGCTGCCTACCTCG
GCGGTGAGGTGTAAACTGAC

Downstream 100 bases:

>100_bases
CCTTTCGGCCCCTATGTGTGCCGCGTCCCGTTTGCAAAAGATGCGCGGCTCAATCCAAGGTGACCGACTGGACCGTTCGT
AGTTGGGAGCATCACGCACT

Product: hydantoin racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAEVALHKDVDAIVVACFDDTGV
DAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIK
SEIREAIAADNAEAIVLGCAGMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ

Sequences:

>Translated_227_residues
MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAEVALHKDVDAIVVACFDDTGV
DAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIK
SEIREAIAADNAEAIVLGCAGMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ
>Mature_227_residues
MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAEVALHKDVDAIVVACFDDTGV
DAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVPGLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIK
SEIREAIAADNAEAIVLGCAGMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ

Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]

COG id: COG4126

COG function: function code E; Hydantoin racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322221, Length=229, Percent_Identity=24.8908296943231, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.99.5 [H]

Molecular weight: Translated: 23759; Mature: 23759

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAE
CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VALHKDVDAIVVACFDDTGVDAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVP
HHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIKSEIREAIAADNAEAIVLGCA
CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
GMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC
>Mature Secondary Structure
MKILMINPNTTSSMTDKIAIAARSVARPDTDIIATNSQDGPASIQGFLDVANCIPGLLAE
CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VALHKDVDAIVVACFDDTGVDAVRTLVDVPVLGIGEAAYHAASMIANKFSVITTLSRSVP
HHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GLENNLMRYGLAQKCARVRATDIPVLKLEEGDPATLFKIKSEIREAIAADNAEAIVLGCA
CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
GMADLMAQLSDEFGLPVIDGVAAGVTFAEALVNNKLRTSKIGAYSGQ
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339422 [H]