| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is buk [H]
Identifier: 110678193
GI number: 110678193
Start: 819667
End: 820767
Strand: Direct
Name: buk [H]
Synonym: RD1_0841
Alternate gene names: 110678193
Gene position: 819667-820767 (Clockwise)
Preceding gene: 110678192
Following gene: 110678194
Centisome position: 19.83
GC content: 58.76
Gene sequence:
>1101_bases GTGGCCCGGAACTTAATTCTCGCCATCAACCCCGGCACCACCACGACGCGATGCGCGCTATATGCGGTGTCATCGTCACA GATCCGTCCGGTGGCAGAACAGAACCTTGACCATGACGAAGCGATGATGGCGCAGTTCGCGAATATCGCGTCACAACTGG AATATCGGGCGACATGCGTGGGGGATTTCATCGCAAGCGAGATGCAAGAGGGCGACCAGTTGGTTGCAGCCGCGGGACGT GGGGGCATGCTGACACCGGTGCCTGCGGGTGTGATTGCGGTCAATCAGGCCTTGGTTGATTTTGCCTTGCACACGCCCGT TTATCACCATGCGAGCAATCTTGGCGCGCCGCTGGCTCATGCCATCGCGCAGACGCATGATGTACCCGCGTTCATCGTGG ACCCGGTGAGCGTCGATGAACTGCCGCCCGTGGCACGCGTGACCGGGGATCCTGATTTGCCGCGCTTCAGCTTTGTGCAT GCGCTGAATATCCGCGCCTGTGGCCGGCGGCTGGCAGCCGACATCGGCAAGGAGTTCAAAGACGTTCGCGCGGTTATTGC GCATCTGGGTGCGGGGTTTTCAATCGCGACGCTCATGGGTGGTAAATTGGTCGACAGTTCCAACCGGATGGAGATTTCAC CATTTACGCCGGAACGGGCCGGGGGGCTGCCGCCTTTGCCGTTGATCGAACTTTGCTACTCGCAGCGCTACAGCAAGGCA GAGCTTCTTTCGCGTCTGTACGGAAAAGGCGGTGTCTTTGCCCATTTGGGGACCAAAGACATCCGCAAGGTCGAAGCCAT GGTAAAGGCAGGCGATGAGAAAGCAGCACTTGTCTATCATGCGATGCTCTACCAGATTGCAAAGGCAATTGGCGCGATGG CATCCGTGGCAGATTTCGATCTTGATGCGATCATTCTGACGGGGGGGCTGTCCAACAGTGATGATGTCGTCGACTATCTG CGCCGCAAGTTGCACCGTATTGCCGACATCGTTGTTTATCCCGGCAGCAACGAATGTCTGGCGCTGGCCGAAGGTGCCGC CCGCGTGCTGAACAAAACCGAAGAGCCGATGACATGGCCCGTGCGCGCGGTGGCCACATGA
Upstream 100 bases:
>100_bases GACGCAAAGGCTCGTCCTATGGATCACGTGAGCAGGGCCGCTACGCCGCTGAATTCTACACGTCGGTCAAAACCGCCTAT TCTTTTGCAGGGTAACAGAC
Downstream 100 bases:
>100_bases GCGAGATACGCAGTTTTGCCGACCTGCGCGCGGCGGTGGTCGATCAAGGCGCCCATCGGCTGAGCGTTGCGGGCGGTGAT GATCCGGAAGTGATGAAGGC
Product: butyrate kinase
Products: NA
Alternate protein names: BK 1; Branched-chain carboxylic acid kinase 1 [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCVGDFIASEMQEGDQLVAAAGR GGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAHAIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVH ALNIRACGRRLAADIGKEFKDVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFDLDAIILTGGLSNSDDVVDYL RRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWPVRAVAT
Sequences:
>Translated_366_residues MARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCVGDFIASEMQEGDQLVAAAGR GGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAHAIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVH ALNIRACGRRLAADIGKEFKDVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFDLDAIILTGGLSNSDDVVDYL RRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWPVRAVAT >Mature_365_residues ARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCVGDFIASEMQEGDQLVAAAGRG GMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAHAIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVHA LNIRACGRRLAADIGKEFKDVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKAE LLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFDLDAIILTGGLSNSDDVVDYLR RKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWPVRAVAT
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG3426
COG function: function code C; Butyrate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR011245 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.7 [H]
Molecular weight: Translated: 39120; Mature: 38989
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCV CCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GDFIASEMQEGDQLVAAAGRGGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAH HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHH AIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVHALNIRACGRRLAADIGKEFK HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA HHHHHHHHHCCCCHHHHHHCCEEECCCCCEEECCCCCHHCCCCCCHHHHHHHHHCCCCHH ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFD HHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LDAIILTGGLSNSDDVVDYLRRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWP CCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHCCCCCCCCCC VRAVAT CCEECC >Mature Secondary Structure ARNLILAINPGTTTTRCALYAVSSSQIRPVAEQNLDHDEAMMAQFANIASQLEYRATCV CCCEEEEECCCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GDFIASEMQEGDQLVAAAGRGGMLTPVPAGVIAVNQALVDFALHTPVYHHASNLGAPLAH HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHH AIAQTHDVPAFIVDPVSVDELPPVARVTGDPDLPRFSFVHALNIRACGRRLAADIGKEFK HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DVRAVIAHLGAGFSIATLMGGKLVDSSNRMEISPFTPERAGGLPPLPLIELCYSQRYSKA HHHHHHHHHCCCCHHHHHHCCEEECCCCCEEECCCCCHHCCCCCCHHHHHHHHHCCCCHH ELLSRLYGKGGVFAHLGTKDIRKVEAMVKAGDEKAALVYHAMLYQIAKAIGAMASVADFD HHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LDAIILTGGLSNSDDVVDYLRRKLHRIADIVVYPGSNECLALAEGAARVLNKTEEPMTWP CCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHCCCCCCCCCC VRAVAT CCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]