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The map label for this gene is 110678167

Identifier: 110678167

GI number: 110678167

Start: 794877

End: 795125

Strand: Direct

Name: 110678167

Synonym: RD1_0810

Alternate gene names: NA

Gene position: 794877-795125 (Clockwise)

Preceding gene: 110678165

Following gene: 110678168

Centisome position: 19.23

GC content: 53.82

Gene sequence:

>249_bases
ATGGAACGGAAAAACCAAGCCTTGATGGAGGCTTACGCGCGGGTTCTCCGCGAGAGACGTAAGGCCGCGAACCTCTCGCA
GGAGGAACTCGCGTTCCGAACGGATCTATCTATGAGCTACATCTCGTTCCTGGAAACGTGTCGGCGACAACCCACCCTGA
CTGTGATGGATGCAATCTGTCGGGAACTTGGCGTATCGCTGACGGAATTTATTGGTGAGGTTGAAGGGGACGTCGAGAAT
AATAGGTAG

Upstream 100 bases:

>100_bases
TGCGCATCATCTGCCTGAAATCCCTCGTTTCCGCTATGACTATAGTAAATTGTTACTATAGTCATTAGAGATATTTTCTC
CGTTCCCCGACAGAGTTGGG

Downstream 100 bases:

>100_bases
GCACTGATCGCCTGGATGTTAGAGGGCGGAGGGTAGATGGGGTGGGCGGCTTCCGCTTCCAGGCGTCGCAATGCGCCTTT
GTCCGGGTGTCATGATCTGC

Product: DNA-binding protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MERKNQALMEAYARVLRERRKAANLSQEELAFRTDLSMSYISFLETCRRQPTLTVMDAICRELGVSLTEFIGEVEGDVEN
NR

Sequences:

>Translated_82_residues
MERKNQALMEAYARVLRERRKAANLSQEELAFRTDLSMSYISFLETCRRQPTLTVMDAICRELGVSLTEFIGEVEGDVEN
NR
>Mature_82_residues
MERKNQALMEAYARVLRERRKAANLSQEELAFRTDLSMSYISFLETCRRQPTLTVMDAICRELGVSLTEFIGEVEGDVEN
NR

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9502; Mature: 9502

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKNQALMEAYARVLRERRKAANLSQEELAFRTDLSMSYISFLETCRRQPTLTVMDAIC
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RELGVSLTEFIGEVEGDVENNR
HHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MERKNQALMEAYARVLRERRKAANLSQEELAFRTDLSMSYISFLETCRRQPTLTVMDAIC
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RELGVSLTEFIGEVEGDVENNR
HHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA