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The map label for this gene is 110678115

Identifier: 110678115

GI number: 110678115

Start: 724460

End: 725395

Strand: Direct

Name: 110678115

Synonym: RD1_0752

Alternate gene names: NA

Gene position: 724460-725395 (Clockwise)

Preceding gene: 110678114

Following gene: 110678116

Centisome position: 17.53

GC content: 58.44

Gene sequence:

>936_bases
ATGAAATACATCATCACCGCAGCGGCGCTATGTGTCGCGACACCAGCCTTCGCTCAAGACAAGATGACCCTGCTGCTGGA
TTGGTTCATAAACCCCGATCACGGTCCGATCATCGTGGCCGAAGAACTGGGCTATTTCGCTGATCAAGGCCTTGAGGTCG
AGATCATACCCCCCGCTGATCCATCTGCCCCGCCGAAACTCGTGGCGGCTGGCCAAGGCGACATCGCCGTCAGCTATCAA
CCGAGCCAACATCTGCACGTTGCCGAAGGTCTGCCGCTGATCCGTGTGGGCACCTTGGTGGCAACGCCGCTCAACTGCTT
GTTGGTTCTGAAAGACGGCCCCATCACAGAGATCAGCCAGCTCAAGGGCCGCAGGATCGGCTTTTCCGTGGCGGGCGTCG
AAGAGGCGGTTCTAAGCGCGATGCTGGGTCGCCATGGTGTCGCGCTGGACGATGTCGAGATGGTCAATGTGAACTTCTCG
CTCAGCCCGTCGTTGATGTCGGGTCAGGTTGATGCAGTCATCGGAGCCTACCGCAATTTTGAGCTGAATCAGATGGAAAT
CGAGGGCGTTGAGGGACGCTGTTTTTACGTCGAGGAAGAGGGCGTGCCGACCTATGACGAATTGATCTACGTGGCGAATC
CCGACCGGATGGATACCGATCAGGTCCGCCGCTTTTTGCGTGCGACGGAACTGGCAACACAATATATCGTCAACAACCCG
CAGGCATCATGGGAGCTGTTCAAAGGCTACGCGCCCGAGCTGGACGACGAACTGAACGCAAGGGCGTGGGTTGATACGCT
GCCCCGTTTTGCCTTGCGCCCTGAAGCGCTGGATGAAGGGCGCTACACACGGTTCGAAGCGTTTCTTGCCGAGAGTGGTC
TGGTTGAAGGCACGCGCCCTGTCTCGGCCCTTGCCGTCGATCTGGGGGCAGAATGA

Upstream 100 bases:

>100_bases
TGCCGTTCTGGCCTGCGTGCCTGGCAGGCGGCGGACCGGCTTTCACAACACTGGCAGGGCGAGATCAAACTTCTCGCTCT
CGGAGAATAAGGAAACCCCC

Downstream 100 bases:

>100_bases
CCTACGGTAAAACCTTCGCGGCCTTGCGGGATAACACGCCTGTCTGGCCCGCCTATACCCGTCATGCATTTGTGCAGGGC
TTGGGCGACGGTACGCTGCC

Product: ABC transporter, periplasmic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKYIITAAALCVATPAFAQDKMTLLLDWFINPDHGPIIVAEELGYFADQGLEVEIIPPADPSAPPKLVAAGQGDIAVSYQ
PSQHLHVAEGLPLIRVGTLVATPLNCLLVLKDGPITEISQLKGRRIGFSVAGVEEAVLSAMLGRHGVALDDVEMVNVNFS
LSPSLMSGQVDAVIGAYRNFELNQMEIEGVEGRCFYVEEEGVPTYDELIYVANPDRMDTDQVRRFLRATELATQYIVNNP
QASWELFKGYAPELDDELNARAWVDTLPRFALRPEALDEGRYTRFEAFLAESGLVEGTRPVSALAVDLGAE

Sequences:

>Translated_311_residues
MKYIITAAALCVATPAFAQDKMTLLLDWFINPDHGPIIVAEELGYFADQGLEVEIIPPADPSAPPKLVAAGQGDIAVSYQ
PSQHLHVAEGLPLIRVGTLVATPLNCLLVLKDGPITEISQLKGRRIGFSVAGVEEAVLSAMLGRHGVALDDVEMVNVNFS
LSPSLMSGQVDAVIGAYRNFELNQMEIEGVEGRCFYVEEEGVPTYDELIYVANPDRMDTDQVRRFLRATELATQYIVNNP
QASWELFKGYAPELDDELNARAWVDTLPRFALRPEALDEGRYTRFEAFLAESGLVEGTRPVSALAVDLGAE
>Mature_311_residues
MKYIITAAALCVATPAFAQDKMTLLLDWFINPDHGPIIVAEELGYFADQGLEVEIIPPADPSAPPKLVAAGQGDIAVSYQ
PSQHLHVAEGLPLIRVGTLVATPLNCLLVLKDGPITEISQLKGRRIGFSVAGVEEAVLSAMLGRHGVALDDVEMVNVNFS
LSPSLMSGQVDAVIGAYRNFELNQMEIEGVEGRCFYVEEEGVPTYDELIYVANPDRMDTDQVRRFLRATELATQYIVNNP
QASWELFKGYAPELDDELNARAWVDTLPRFALRPEALDEGRYTRFEAFLAESGLVEGTRPVSALAVDLGAE

Specific function: Probably involved in thiamine biosynthesis [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NMT1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319957, Length=275, Percent_Identity=26.5454545454545, Blast_Score=120, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6321050, Length=275, Percent_Identity=26.5454545454545, Blast_Score=119, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6323997, Length=275, Percent_Identity=26.5454545454545, Blast_Score=119, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6322616, Length=275, Percent_Identity=26.1818181818182, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 33978; Mature: 33978

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIITAAALCVATPAFAQDKMTLLLDWFINPDHGPIIVAEELGYFADQGLEVEIIPPAD
CCEEHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEHHCCHHHCCCCEEEEECCCC
PSAPPKLVAAGQGDIAVSYQPSQHLHVAEGLPLIRVGTLVATPLNCLLVLKDGPITEISQ
CCCCCCEEEECCCCEEEEECCCCCEEHHCCCCEEEEHHHHHCCCEEEEEECCCCCHHHHH
LKGRRIGFSVAGVEEAVLSAMLGRHGVALDDVEMVNVNFSLSPSLMSGQVDAVIGAYRNF
CCCCCCEEEEHHHHHHHHHHHHCCCCCEECCEEEEEEEEEECCHHHCCCHHHHHHHHCCC
ELNQMEIEGVEGRCFYVEEEGVPTYDELIYVANPDRMDTDQVRRFLRATELATQYIVNNP
CCCEEEEECCCCEEEEEECCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
QASWELFKGYAPELDDELNARAWVDTLPRFALRPEALDEGRYTRFEAFLAESGLVEGTRP
CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCC
VSALAVDLGAE
CEEEEEECCCC
>Mature Secondary Structure
MKYIITAAALCVATPAFAQDKMTLLLDWFINPDHGPIIVAEELGYFADQGLEVEIIPPAD
CCEEHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEHHCCHHHCCCCEEEEECCCC
PSAPPKLVAAGQGDIAVSYQPSQHLHVAEGLPLIRVGTLVATPLNCLLVLKDGPITEISQ
CCCCCCEEEECCCCEEEEECCCCCEEHHCCCCEEEEHHHHHCCCEEEEEECCCCCHHHHH
LKGRRIGFSVAGVEEAVLSAMLGRHGVALDDVEMVNVNFSLSPSLMSGQVDAVIGAYRNF
CCCCCCEEEEHHHHHHHHHHHHCCCCCEECCEEEEEEEEEECCHHHCCCHHHHHHHHCCC
ELNQMEIEGVEGRCFYVEEEGVPTYDELIYVANPDRMDTDQVRRFLRATELATQYIVNNP
CCCEEEEECCCCEEEEEECCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
QASWELFKGYAPELDDELNARAWVDTLPRFALRPEALDEGRYTRFEAFLAESGLVEGTRP
CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCC
VSALAVDLGAE
CEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]