Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yihV [H]

Identifier: 110678108

GI number: 110678108

Start: 718424

End: 719293

Strand: Direct

Name: yihV [H]

Synonym: RD1_0745

Alternate gene names: 110678108

Gene position: 718424-719293 (Clockwise)

Preceding gene: 110678098

Following gene: 110678109

Centisome position: 17.38

GC content: 60.34

Gene sequence:

>870_bases
GTGCCCCATATCCTCTGCGCCGGTCTGATTACCGTTGATTTTACATTTGAGACAGATGGTTTCCCAGTCGAGGGAAACAA
GCACCAGGCGCGGATGTCGCGTATGATGCCCGGCGGTGGTGCGTTGCTGGCAGCCTCTGCGATTGCAAAGCTTGGTGGAC
GTGTGGATCTAAAAGGCTGCGTCGGCGATGACGCGTTAGGCGCGCATGTGCGGGAAACCCTTTGCGCACGGGGCATTGGC
ACGGACCACCTACAAACGATAGCGGGCACGGGTACAGCGCGATCCGCCGTGATCGTCAGCGATGCCGGTGAGCGCACAAT
CATCAACCACCGCGCGCAAGCACTGTTTCCTGAAACGCCTGACATCCAATTTGATCATGATGCCGCCCTGGTCGATACCC
GCTGGCCCGGCGCTGCCGTTCGTATCTTGCGAGCGGCGCGGATGGCCGGAAAATTGGGTGTGATTGATGCCGAAAGCCCG
GTGCGCCTGTGTCACGAAGCTCTGCCATTGGCGAGCCACATCATTTTTTCCGAACAGGGCTTGAGCGATTATGCCGGGGC
CTGCGACGCGGCAGCCCTGTCAGATGTCGCCCATGAACTGGGTGTCTGGGTTGCAGTTACCCGCGGGGCGCGCCCGGTCT
TGTGCCATGATGGTGTAACCTTGACGCAGGTCTTGCCTTGTAAGGTGGATGCTGTGGATACTCTGGGCGCGGGTGACGTG
TGGCATGGGGCTTTCACGCTCGCCCTTGCGCGCGGCGAAACTGCGGTTGCGGCGGCAAAATTTGGTAACGCAGCGGCGGC
TGCAAAAGTGACGATGCCCGGGGGTCGTATGCCAGATCAGACAGACGTGGCGGCTTTCCTTGACTGTTGA

Upstream 100 bases:

>100_bases
ATTTTTCCCCCGTGTAAATACTGATAAGTTCACCAGCTGCGCGTTGACTGTCAAGCTAACATGTTAGACTGTTGTTGAAA
ATAGTCACTTAGGTCTTGCA

Downstream 100 bases:

>100_bases
TCTGAGGTGTCGGCGGCTGTGCTCACGCCAACTTGGTGCCGCATCGCGTTCATAGCGGTGCGGATGATTTTTAAATCGCA
TGCGGACAGGATGACGGCGG

Product: sugar kinase yihV, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPHILCAGLITVDFTFETDGFPVEGNKHQARMSRMMPGGGALLAASAIAKLGGRVDLKGCVGDDALGAHVRETLCARGIG
TDHLQTIAGTGTARSAVIVSDAGERTIINHRAQALFPETPDIQFDHDAALVDTRWPGAAVRILRAARMAGKLGVIDAESP
VRLCHEALPLASHIIFSEQGLSDYAGACDAAALSDVAHELGVWVAVTRGARPVLCHDGVTLTQVLPCKVDAVDTLGAGDV
WHGAFTLALARGETAVAAAKFGNAAAAAKVTMPGGRMPDQTDVAAFLDC

Sequences:

>Translated_289_residues
MPHILCAGLITVDFTFETDGFPVEGNKHQARMSRMMPGGGALLAASAIAKLGGRVDLKGCVGDDALGAHVRETLCARGIG
TDHLQTIAGTGTARSAVIVSDAGERTIINHRAQALFPETPDIQFDHDAALVDTRWPGAAVRILRAARMAGKLGVIDAESP
VRLCHEALPLASHIIFSEQGLSDYAGACDAAALSDVAHELGVWVAVTRGARPVLCHDGVTLTQVLPCKVDAVDTLGAGDV
WHGAFTLALARGETAVAAAKFGNAAAAAKVTMPGGRMPDQTDVAAFLDC
>Mature_288_residues
PHILCAGLITVDFTFETDGFPVEGNKHQARMSRMMPGGGALLAASAIAKLGGRVDLKGCVGDDALGAHVRETLCARGIGT
DHLQTIAGTGTARSAVIVSDAGERTIINHRAQALFPETPDIQFDHDAALVDTRWPGAAVRILRAARMAGKLGVIDAESPV
RLCHEALPLASHIIFSEQGLSDYAGACDAAALSDVAHELGVWVAVTRGARPVLCHDGVTLTQVLPCKVDAVDTLGAGDVW
HGAFTLALARGETAVAAAKFGNAAAAAKVTMPGGRMPDQTDVAAFLDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082343, Length=294, Percent_Identity=34.3537414965986, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1790193, Length=302, Percent_Identity=29.1390728476821, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 29916; Mature: 29785

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHILCAGLITVDFTFETDGFPVEGNKHQARMSRMMPGGGALLAASAIAKLGGRVDLKGC
CCCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEC
VGDDALGAHVRETLCARGIGTDHLQTIAGTGTARSAVIVSDAGERTIINHRAQALFPETP
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCC
DIQFDHDAALVDTRWPGAAVRILRAARMAGKLGVIDAESPVRLCHEALPLASHIIFSEQG
CCEECCCCEEEECCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHEECCCC
LSDYAGACDAAALSDVAHELGVWVAVTRGARPVLCHDGVTLTQVLPCKVDAVDTLGAGDV
CHHHCCCCHHHHHHHHHHHHCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCH
WHGAFTLALARGETAVAAAKFGNAAAAAKVTMPGGRMPDQTDVAAFLDC
HHCEEEEEEECCCCEEEHHHCCCCHHEEEEECCCCCCCCCCCHHHEECC
>Mature Secondary Structure 
PHILCAGLITVDFTFETDGFPVEGNKHQARMSRMMPGGGALLAASAIAKLGGRVDLKGC
CCEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEC
VGDDALGAHVRETLCARGIGTDHLQTIAGTGTARSAVIVSDAGERTIINHRAQALFPETP
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCC
DIQFDHDAALVDTRWPGAAVRILRAARMAGKLGVIDAESPVRLCHEALPLASHIIFSEQG
CCEECCCCEEEECCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHEECCCC
LSDYAGACDAAALSDVAHELGVWVAVTRGARPVLCHDGVTLTQVLPCKVDAVDTLGAGDV
CHHHCCCCHHHHHHHHHHHHCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCH
WHGAFTLALARGETAVAAAKFGNAAAAAKVTMPGGRMPDQTDVAAFLDC
HHCEEEEEEECCCCEEEHHHCCCCHHEEEEECCCCCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]