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The map label for this gene is ibpA [H]

Identifier: 110678008

GI number: 110678008

Start: 610631

End: 611098

Strand: Direct

Name: ibpA [H]

Synonym: RD1_0629

Alternate gene names: 110678008

Gene position: 610631-611098 (Clockwise)

Preceding gene: 110678007

Following gene: 110678011

Centisome position: 14.77

GC content: 56.84

Gene sequence:

>468_bases
ATGCGTACGTTTGATTTTGCACCGCTTTACCGTGCAACTGTTGGCTTTGATCAGATCGCTGATCTGATGGATCGAGTGCT
CACCAACGAGGGCGCCCAGCCGAGTTATCCACCCTACAACATCGAAAAACTGGACGATGACGCCTATCGGATTTCGGTGG
CGGTTGCCGGGTTTTCTGATCAGGACCTGAGCGTTGAGGTGCGTGAAAACGCGCTGATCGTCTCTGCGCGCAAGGCCGAG
GAAAACACGGAGCGCACTTATCTGCACCGTGGCATTGCGACCCGCGCGTTTGAACGCCGCTTCCACCTTGCCGACCACGT
GCATGTGACCGGTGCCAGCCACGTTGATGGCATGTTGCACATTGATCTGATGCGCGAAGTGCCCGAGGCGCTCAAGCCCC
GTCAGATCTCGATCACCTCGGCCAAGCAGATCGAGAAAGATGTTGTCGACGCAAAGGCCGTGAACTGA

Upstream 100 bases:

>100_bases
ATCGTAAGGACGCCTTTGTGAGGGTTCTTGCGAAAACTGGAACCGGATGTGTCTGGGGTAAGAGCATCCGAATTTATCGC
TCAAAGAAGAGGATATACCT

Downstream 100 bases:

>100_bases
AGCGTCAGACGACGACCTTGCTCATCCATCGCCGTCTGAAATCAAGGATTTCAAGGTGTTGGGTGACATGCGATGTGTCT
GGCGCCTTGTCAGGCACCAT

Product: HSP20 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRTFDFAPLYRATVGFDQIADLMDRVLTNEGAQPSYPPYNIEKLDDDAYRISVAVAGFSDQDLSVEVRENALIVSARKAE
ENTERTYLHRGIATRAFERRFHLADHVHVTGASHVDGMLHIDLMREVPEALKPRQISITSAKQIEKDVVDAKAVN

Sequences:

>Translated_155_residues
MRTFDFAPLYRATVGFDQIADLMDRVLTNEGAQPSYPPYNIEKLDDDAYRISVAVAGFSDQDLSVEVRENALIVSARKAE
ENTERTYLHRGIATRAFERRFHLADHVHVTGASHVDGMLHIDLMREVPEALKPRQISITSAKQIEKDVVDAKAVN
>Mature_155_residues
MRTFDFAPLYRATVGFDQIADLMDRVLTNEGAQPSYPPYNIEKLDDDAYRISVAVAGFSDQDLSVEVRENALIVSARKAE
ENTERTYLHRGIATRAFERRFHLADHVHVTGASHVDGMLHIDLMREVPEALKPRQISITSAKQIEKDVVDAKAVN

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=139, Percent_Identity=47.4820143884892, Blast_Score=149, Evalue=7e-38,
Organism=Escherichia coli, GI87082316, Length=139, Percent_Identity=41.726618705036, Blast_Score=129, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17468; Mature: 17468

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFDFAPLYRATVGFDQIADLMDRVLTNEGAQPSYPPYNIEKLDDDAYRISVAVAGFSD
CCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEEEECCCC
QDLSVEVRENALIVSARKAEENTERTYLHRGIATRAFERRFHLADHVHVTGASHVDGMLH
CCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHH
IDLMREVPEALKPRQISITSAKQIEKDVVDAKAVN
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTFDFAPLYRATVGFDQIADLMDRVLTNEGAQPSYPPYNIEKLDDDAYRISVAVAGFSD
CCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEEEECCCC
QDLSVEVRENALIVSARKAEENTERTYLHRGIATRAFERRFHLADHVHVTGASHVDGMLH
CCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHH
IDLMREVPEALKPRQISITSAKQIEKDVVDAKAVN
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]