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The map label for this gene is 110677924

Identifier: 110677924

GI number: 110677924

Start: 523935

End: 525065

Strand: Direct

Name: 110677924

Synonym: RD1_0540

Alternate gene names: NA

Gene position: 523935-525065 (Clockwise)

Preceding gene: 110677922

Following gene: 110677925

Centisome position: 12.68

GC content: 58.71

Gene sequence:

>1131_bases
GTGAAATCACTCATTCTGTCTGCGGCACTGGCTGCTTTGGCAGGCGGCGCATCGGCAGAAGGCGTCAAGGTCGGCATGAT
CACAACCCTTTCGGGGGGCGGTGCCGGGCTAGGTATCGACGTGCGCGACGGCTTCATGCTCGCGGTGAAACAGTCGGGCC
GTGACGACATCGAGGTCGTGATCGAAGACGATCAGCGCAAACCCGATATCGCCGTGCAACTGGCCGACAAGATGATCCAG
TCCGAAAAGGTCGATGTGATGACGGGGATAATCTGGTCGAACCTCGCCATGGCCGTCGTTCCGGCGACTGTCGCACAGGG
CAAGTTTTATCTGTCACCCAATGCGGGTCCATCCGCACTGGCGGGTAAGGGGTGCCATCCGAACTATTTCAACGTCGCGT
GGCAAAACGATAACCTGCACGAGGCCGCTGGTGCCTATGCCACCTCTGCGGGCTATTCCAACAGCTTCATCCTCGCGCCA
AACTATCCCGCCGGTCAGGATGCGCTGACGGGCTACAAGCGGACCTTTGGCGGCGAATTGGCCGGGGAGTTGTTCACCAA
ACTGGGTCAAACCGATTACGCTGCCGAGATTGCGCAGATCCGCGCGTCCGGGGCGGATTCCGTGTTCTTTTTCCTGCCCG
GTGGCATGGGGATTTCATTCCTCAAGCAATATGCCGACAGTGGCATTGATATCCCGGTGGTTGGTCCTGCGTTTTCCTTT
GATCAGGGCATCCTGCAGGCCGTCGGTGATGCAGCCCTTGGTGTGGTGAACACATCGCAGTGGAGCAAGGACATCGACAA
CCCGACCAATGCCGCCTTTGTCGAGACATTTCAGGCGGAATACGGGCGTTTGCCGTCACTCTATGCCAGTCAAGGGTTTG
ACACGGCAAACCTGCTGATCTCTGCGCTCGCAACGGCCAGCCCTGCGGATGCGGACGCCTTCCGCGCAGCACTCAAGGCG
GCGGATTTCGACAGCACACGCGGTGATTTTGCCTTTGGGCCCAACCATCACCCCATTCAGGATATCTATGCCCGCGAGGT
CATCAAGGAAGGCGATGTCTTTACCAACAAGATCATCGGCGTCGCCCTCGAAGACCACGCTGACGCCTATGCGGCTGAGT
GCAAGATGTAA

Upstream 100 bases:

>100_bases
GTCTTGCGGGATATGAATAATCGACGCAGTTGCAGGGGTGGATGCGATGCGTCAGACGACCAAAAACCACCCGGGAAAAA
CAGGGGAAATCAAGATGAAG

Downstream 100 bases:

>100_bases
GCAACGCCTTGGTCCGGGTGTCTCTTGGCCCCCGGACCGGTAAATAGAACCATGTCCACAATTCTGATCATCGAACAGGT
CCTGAACGGTCTGCAATTCG

Product: ABC transporter substrate binding protei

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKSLILSAALAALAGGASAEGVKVGMITTLSGGGAGLGIDVRDGFMLAVKQSGRDDIEVVIEDDQRKPDIAVQLADKMIQ
SEKVDVMTGIIWSNLAMAVVPATVAQGKFYLSPNAGPSALAGKGCHPNYFNVAWQNDNLHEAAGAYATSAGYSNSFILAP
NYPAGQDALTGYKRTFGGELAGELFTKLGQTDYAAEIAQIRASGADSVFFFLPGGMGISFLKQYADSGIDIPVVGPAFSF
DQGILQAVGDAALGVVNTSQWSKDIDNPTNAAFVETFQAEYGRLPSLYASQGFDTANLLISALATASPADADAFRAALKA
ADFDSTRGDFAFGPNHHPIQDIYAREVIKEGDVFTNKIIGVALEDHADAYAAECKM

Sequences:

>Translated_376_residues
MKSLILSAALAALAGGASAEGVKVGMITTLSGGGAGLGIDVRDGFMLAVKQSGRDDIEVVIEDDQRKPDIAVQLADKMIQ
SEKVDVMTGIIWSNLAMAVVPATVAQGKFYLSPNAGPSALAGKGCHPNYFNVAWQNDNLHEAAGAYATSAGYSNSFILAP
NYPAGQDALTGYKRTFGGELAGELFTKLGQTDYAAEIAQIRASGADSVFFFLPGGMGISFLKQYADSGIDIPVVGPAFSF
DQGILQAVGDAALGVVNTSQWSKDIDNPTNAAFVETFQAEYGRLPSLYASQGFDTANLLISALATASPADADAFRAALKA
ADFDSTRGDFAFGPNHHPIQDIYAREVIKEGDVFTNKIIGVALEDHADAYAAECKM
>Mature_376_residues
MKSLILSAALAALAGGASAEGVKVGMITTLSGGGAGLGIDVRDGFMLAVKQSGRDDIEVVIEDDQRKPDIAVQLADKMIQ
SEKVDVMTGIIWSNLAMAVVPATVAQGKFYLSPNAGPSALAGKGCHPNYFNVAWQNDNLHEAAGAYATSAGYSNSFILAP
NYPAGQDALTGYKRTFGGELAGELFTKLGQTDYAAEIAQIRASGADSVFFFLPGGMGISFLKQYADSGIDIPVVGPAFSF
DQGILQAVGDAALGVVNTSQWSKDIDNPTNAAFVETFQAEYGRLPSLYASQGFDTANLLISALATASPADADAFRAALKA
ADFDSTRGDFAFGPNHHPIQDIYAREVIKEGDVFTNKIIGVALEDHADAYAAECKM

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 39374; Mature: 39374

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLILSAALAALAGGASAEGVKVGMITTLSGGGAGLGIDVRDGFMLAVKQSGRDDIEVV
CCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCEEEE
IEDDQRKPDIAVQLADKMIQSEKVDVMTGIIWSNLAMAVVPATVAQGKFYLSPNAGPSAL
EECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
AGKGCHPNYFNVAWQNDNLHEAAGAYATSAGYSNSFILAPNYPAGQDALTGYKRTFGGEL
CCCCCCCCCEEEEECCCCHHHHHCCCEECCCCCCEEEECCCCCCCCHHHHHHHHHHCHHH
AGELFTKLGQTDYAAEIAQIRASGADSVFFFLPGGMGISFLKQYADSGIDIPVVGPAFSF
HHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCH
DQGILQAVGDAALGVVNTSQWSKDIDNPTNAAFVETFQAEYGRLPSLYASQGFDTANLLI
HHHHHHHHCHHHHEEEECHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHH
SALATASPADADAFRAALKAADFDSTRGDFAFGPNHHPIQDIYAREVIKEGDVFTNKIIG
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHEEE
VALEDHADAYAAECKM
EEECCCCCHHHHHCCC
>Mature Secondary Structure
MKSLILSAALAALAGGASAEGVKVGMITTLSGGGAGLGIDVRDGFMLAVKQSGRDDIEVV
CCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCEEEE
IEDDQRKPDIAVQLADKMIQSEKVDVMTGIIWSNLAMAVVPATVAQGKFYLSPNAGPSAL
EECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
AGKGCHPNYFNVAWQNDNLHEAAGAYATSAGYSNSFILAPNYPAGQDALTGYKRTFGGEL
CCCCCCCCCEEEEECCCCHHHHHCCCEECCCCCCEEEECCCCCCCCHHHHHHHHHHCHHH
AGELFTKLGQTDYAAEIAQIRASGADSVFFFLPGGMGISFLKQYADSGIDIPVVGPAFSF
HHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCH
DQGILQAVGDAALGVVNTSQWSKDIDNPTNAAFVETFQAEYGRLPSLYASQGFDTANLLI
HHHHHHHHCHHHHEEEECHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHH
SALATASPADADAFRAALKAADFDSTRGDFAFGPNHHPIQDIYAREVIKEGDVFTNKIIG
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHEEE
VALEDHADAYAAECKM
EEECCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA