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The map label for this gene is 110677864

Identifier: 110677864

GI number: 110677864

Start: 462237

End: 463301

Strand: Direct

Name: 110677864

Synonym: RD1_0475

Alternate gene names: NA

Gene position: 462237-463301 (Clockwise)

Preceding gene: 110677862

Following gene: 110677865

Centisome position: 11.18

GC content: 54.93

Gene sequence:

>1065_bases
ATGCGCAAACACGCGCTTGTTCGAACACGCGGATTCTCAAAAGATATCCCGCAGATATCGGAAAACCTGTGCTGCGAAAG
GGCTGTTGTGACGCCTCGAAAAACCCACGTTCAGTGGCCCACATTGCTTGTCTGTCTTTGCTGCTATGGCGGTGTTGCAG
GGTCTACGCTTTACGCGGAGATACTTGGTCCAGTCTTGGCAGGGCTGGTCCTGACGCTTTCCCTGACGCTTTTTTCCTCC
TTCAATCACGAGGTGCTCCATGGTCATCCGTTTCGCAGCAGGCACGCAAATACGGCGCTGGTTTTTCCGGCGATGGGTCT
GGTAATCCCCTATATGCGGTTTCGGGACACACATCTGGCGCATCATCATGATCCGTCGCTGACCGACCCTTATGACGATC
CGGAATCGAATTACGTTGATCCTGCTGTATGGTGCAGATGGTCAGTCGCACGCCGCAGGGTTTATGCATGGAACAACACC
TTGCTGGGACGCATGTTGATCGGGCCAATCATCGGCTTGCTCACTTTTTACGAGGGCGATGCACGGCGGATCAGGCAGGG
AGACCGTGATGTCATCCGGGCCTATCTGTTTCATTTTGCGGGGCTGATCCCGGTTGTGTTTTGGCTGGTCTGGATGAGCG
AGATGCCATTCTGGCTATATGCAATCGCTGTCTATGCCAGCCTCGCTATCCTCAAGATCCGCACGTTTCTGGAGCATCAG
GCCCATGAAAAGGCGCGTTGCCGCAGTGTGATCATCGAAGATCGCGGGCCGCTGTCTGTCCTGTTTCTGAAAAACAACCT
GCATGCGGTGCACCATGCTCATCCGACGCTGCCGTGGTATCGGTTACAGGGGTTTTATGATAAGCGACGCGCTGTGGTTC
TGACGCGCAATGGTGGCTACGTTTACAGATCCTACATGCAGATCGCGGGGCTGTTCCTGCTGAAAGCCAAGGATCCTGTG
CCGCATAGCCAATGGAGTAGCGGGCATGAACAGGTGCCTCAGCCGCAAAAACCGCAAAAAACCACGGCGGCGCGCGATAT
CACTGCTTGCAACTTGACCGGATGA

Upstream 100 bases:

>100_bases
ACAGTCGGGAAAGATCACGTTTATCCATTGGGTAAAAATGGCACCATATGTCGTAGAAACACAACAAAATTCTGAAAGTG
ATGCGTTTGTTATACAAAAC

Downstream 100 bases:

>100_bases
TCCGCTTTGATGTCGGTATACGTCAGGGAGGCATCCATGAAAGATATCCAGAACACGCTCGTCGAACTGCAGATCGAGGG
CGGTATTGCGACGATAACGC

Product: beta-carotene ketolase, putative

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Beta-Carotene Ketolase

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRKHALVRTRGFSKDIPQISENLCCERAVVTPRKTHVQWPTLLVCLCCYGGVAGSTLYAEILGPVLAGLVLTLSLTLFSS
FNHEVLHGHPFRSRHANTALVFPAMGLVIPYMRFRDTHLAHHHDPSLTDPYDDPESNYVDPAVWCRWSVARRRVYAWNNT
LLGRMLIGPIIGLLTFYEGDARRIRQGDRDVIRAYLFHFAGLIPVVFWLVWMSEMPFWLYAIAVYASLAILKIRTFLEHQ
AHEKARCRSVIIEDRGPLSVLFLKNNLHAVHHAHPTLPWYRLQGFYDKRRAVVLTRNGGYVYRSYMQIAGLFLLKAKDPV
PHSQWSSGHEQVPQPQKPQKTTAARDITACNLTG

Sequences:

>Translated_354_residues
MRKHALVRTRGFSKDIPQISENLCCERAVVTPRKTHVQWPTLLVCLCCYGGVAGSTLYAEILGPVLAGLVLTLSLTLFSS
FNHEVLHGHPFRSRHANTALVFPAMGLVIPYMRFRDTHLAHHHDPSLTDPYDDPESNYVDPAVWCRWSVARRRVYAWNNT
LLGRMLIGPIIGLLTFYEGDARRIRQGDRDVIRAYLFHFAGLIPVVFWLVWMSEMPFWLYAIAVYASLAILKIRTFLEHQ
AHEKARCRSVIIEDRGPLSVLFLKNNLHAVHHAHPTLPWYRLQGFYDKRRAVVLTRNGGYVYRSYMQIAGLFLLKAKDPV
PHSQWSSGHEQVPQPQKPQKTTAARDITACNLTG
>Mature_354_residues
MRKHALVRTRGFSKDIPQISENLCCERAVVTPRKTHVQWPTLLVCLCCYGGVAGSTLYAEILGPVLAGLVLTLSLTLFSS
FNHEVLHGHPFRSRHANTALVFPAMGLVIPYMRFRDTHLAHHHDPSLTDPYDDPESNYVDPAVWCRWSVARRRVYAWNNT
LLGRMLIGPIIGLLTFYEGDARRIRQGDRDVIRAYLFHFAGLIPVVFWLVWMSEMPFWLYAIAVYASLAILKIRTFLEHQ
AHEKARCRSVIIEDRGPLSVLFLKNNLHAVHHAHPTLPWYRLQGFYDKRRAVVLTRNGGYVYRSYMQIAGLFLLKAKDPV
PHSQWSSGHEQVPQPQKPQKTTAARDITACNLTG

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40444; Mature: 40444

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHALVRTRGFSKDIPQISENLCCERAVVTPRKTHVQWPTLLVCLCCYGGVAGSTLYAE
CCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
ILGPVLAGLVLTLSLTLFSSFNHEVLHGHPFRSRHANTALVFPAMGLVIPYMRFRDTHLA
HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHC
HHHDPSLTDPYDDPESNYVDPAVWCRWSVARRRVYAWNNTLLGRMLIGPIIGLLTFYEGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHCCCC
ARRIRQGDRDVIRAYLFHFAGLIPVVFWLVWMSEMPFWLYAIAVYASLAILKIRTFLEHQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHEKARCRSVIIEDRGPLSVLFLKNNLHAVHHAHPTLPWYRLQGFYDKRRAVVLTRNGGY
HHHHHHHHHEEEECCCCEEEEEEECCCCCHHCCCCCCCHHHHCCHHCCCEEEEEECCCCH
VYRSYMQIAGLFLLKAKDPVPHSQWSSGHEQVPQPQKPQKTTAARDITACNLTG
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCC
>Mature Secondary Structure
MRKHALVRTRGFSKDIPQISENLCCERAVVTPRKTHVQWPTLLVCLCCYGGVAGSTLYAE
CCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
ILGPVLAGLVLTLSLTLFSSFNHEVLHGHPFRSRHANTALVFPAMGLVIPYMRFRDTHLA
HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHC
HHHDPSLTDPYDDPESNYVDPAVWCRWSVARRRVYAWNNTLLGRMLIGPIIGLLTFYEGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHCCCC
ARRIRQGDRDVIRAYLFHFAGLIPVVFWLVWMSEMPFWLYAIAVYASLAILKIRTFLEHQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHEKARCRSVIIEDRGPLSVLFLKNNLHAVHHAHPTLPWYRLQGFYDKRRAVVLTRNGGY
HHHHHHHHHEEEECCCCEEEEEEECCCCCHHCCCCCCCHHHHCCHHCCCEEEEEECCCCH
VYRSYMQIAGLFLLKAKDPVPHSQWSSGHEQVPQPQKPQKTTAARDITACNLTG
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA