| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110677716
Identifier: 110677716
GI number: 110677716
Start: 301733
End: 302128
Strand: Direct
Name: 110677716
Synonym: RD1_0313
Alternate gene names: NA
Gene position: 301733-302128 (Clockwise)
Preceding gene: 110677709
Following gene: 110677717
Centisome position: 7.3
GC content: 59.34
Gene sequence:
>396_bases ATGAGGGTGAGAAAAATGAACCATGTCCTGGAGATCAGGCTAAATGAAACAGTGCATGTCTGTCAGGACAGGCTCAGCGC GCTTTATGCGCAACTTGGCGAGGCCGGCGCAGAAGATGTCGTTTGCCGCGCCATGGAGGAGCTGGCATTGCGGCTTTCGC ATTGCAGCCGCCTGCATGCAGCGGGCGAAGCTGATGAGCTGCGCAAATGCGCACGCTCCCTCATCGCGATATCGGAACAG ATCGGCATGTTGGTGCTGGCGCGCGTCGCCGCCGATGTGATTGAAGCGCTGGATGGCAATGACGGCCCGGCCGTGGCTGC GACGCTCAGCAGGTTGTTGCGGATCGGCGAGCAGTCGCTAAGCGCTATATGGGACCTGCAAGACATCACGATCTGA
Upstream 100 bases:
>100_bases AGCTTTAGCTGCAATTATCCGTAAATTCGAGGGGAAACATTGATCTGTCTCAACTCTTTAGTCAGAAATTCGCGCGAAAA CACTCAGGCCGTGGGGGCAA
Downstream 100 bases:
>100_bases TGCCTTGCACCGCCATCAGATCAGACTAGGCTGCGAGGGCGATTTTGTGAAAGGCGCCCTCTTATGACTTCCCTGTTTGC TGATGCTGACGATCAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MRVRKMNHVLEIRLNETVHVCQDRLSALYAQLGEAGAEDVVCRAMEELALRLSHCSRLHAAGEADELRKCARSLIAISEQ IGMLVLARVAADVIEALDGNDGPAVAATLSRLLRIGEQSLSAIWDLQDITI
Sequences:
>Translated_131_residues MRVRKMNHVLEIRLNETVHVCQDRLSALYAQLGEAGAEDVVCRAMEELALRLSHCSRLHAAGEADELRKCARSLIAISEQ IGMLVLARVAADVIEALDGNDGPAVAATLSRLLRIGEQSLSAIWDLQDITI >Mature_131_residues MRVRKMNHVLEIRLNETVHVCQDRLSALYAQLGEAGAEDVVCRAMEELALRLSHCSRLHAAGEADELRKCARSLIAISEQ IGMLVLARVAADVIEALDGNDGPAVAATLSRLLRIGEQSLSAIWDLQDITI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14315; Mature: 14315
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRKMNHVLEIRLNETVHVCQDRLSALYAQLGEAGAEDVVCRAMEELALRLSHCSRLHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC AGEADELRKCARSLIAISEQIGMLVLARVAADVIEALDGNDGPAVAATLSRLLRIGEQSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SAIWDLQDITI HHHHHHHHCCC >Mature Secondary Structure MRVRKMNHVLEIRLNETVHVCQDRLSALYAQLGEAGAEDVVCRAMEELALRLSHCSRLHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC AGEADELRKCARSLIAISEQIGMLVLARVAADVIEALDGNDGPAVAATLSRLLRIGEQSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SAIWDLQDITI HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA