| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110677666
Identifier: 110677666
GI number: 110677666
Start: 257816
End: 258316
Strand: Direct
Name: 110677666
Synonym: RD1_0261
Alternate gene names: NA
Gene position: 257816-258316 (Clockwise)
Preceding gene: 110677665
Following gene: 110677667
Centisome position: 6.24
GC content: 48.1
Gene sequence:
>501_bases ATGAAAAAGATCCTCCCTGTCTTGATGCTACTGCTTGGGTCTGCTGCAGGTGTGGGCGCAGGTGTATACCTTAGGCCGCC ACCAACAGAAGAGGCCGCTGCGCCGGAAGAAACTGCGGAAGAGGGCAGTGCTGCCACTGAAAAAGAAGAAGCACAAGATG ATCTGCCTATTGCCGGTAAAGAATATGTCAAGCTAAGCAATCAATTTGTTGTACCAATCGTTGAAAAAGATCGTGTTTCA TCGATGATTGTGATGACGTTAAGTGTCGAGGCGCCACAGGGTCAGGGGGAAGTGATTTACGACCTCGAGCCTAAAATACG CGATGTGTTCCTCAGAATTCTATTTGATCATGCCGCAATAGGTGGATTTCGAGGTGCTTTCATTAACAACGAGAACCTTG ACGTCGTGCGTCGAAATCTGCGGGATGGAGCCATCAAGACATTTGGGGAAGACCTCATTAGCGATGTCCTTATCTTTGAA ATTGCCCGTCAGGATTACTAG
Upstream 100 bases:
>100_bases ACGGGTCTCCTACGGTGGTCGCGGCCAGATCACGGATGTTCAACAGCCGCGCTGGGGTCAGCAAGCCCTTGATATCGTAT TGCCTTATTGAGGTCACAGT
Downstream 100 bases:
>100_bases GTTTAAGTGCTTTTAGATTTGTAGACACTTTTCTCCCTAGCTTTGAGGCAAAGAGGCCGACATGGGAACAAGCATTTACA GCGACGATTTCACACGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Flagellar Motor Protein MotA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKKILPVLMLLLGSAAGVGAGVYLRPPPTEEAAAPEETAEEGSAATEKEEAQDDLPIAGKEYVKLSNQFVVPIVEKDRVS SMIVMTLSVEAPQGQGEVIYDLEPKIRDVFLRILFDHAAIGGFRGAFINNENLDVVRRNLRDGAIKTFGEDLISDVLIFE IARQDY
Sequences:
>Translated_166_residues MKKILPVLMLLLGSAAGVGAGVYLRPPPTEEAAAPEETAEEGSAATEKEEAQDDLPIAGKEYVKLSNQFVVPIVEKDRVS SMIVMTLSVEAPQGQGEVIYDLEPKIRDVFLRILFDHAAIGGFRGAFINNENLDVVRRNLRDGAIKTFGEDLISDVLIFE IARQDY >Mature_166_residues MKKILPVLMLLLGSAAGVGAGVYLRPPPTEEAAAPEETAEEGSAATEKEEAQDDLPIAGKEYVKLSNQFVVPIVEKDRVS SMIVMTLSVEAPQGQGEVIYDLEPKIRDVFLRILFDHAAIGGFRGAFINNENLDVVRRNLRDGAIKTFGEDLISDVLIFE IARQDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18174; Mature: 18174
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILPVLMLLLGSAAGVGAGVYLRPPPTEEAAAPEETAEEGSAATEKEEAQDDLPIAGK CHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCH EYVKLSNQFVVPIVEKDRVSSMIVMTLSVEAPQGQGEVIYDLEPKIRDVFLRILFDHAAI HHHEECCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHH GGFRGAFINNENLDVVRRNLRDGAIKTFGEDLISDVLIFEIARQDY CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKILPVLMLLLGSAAGVGAGVYLRPPPTEEAAAPEETAEEGSAATEKEEAQDDLPIAGK CHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCH EYVKLSNQFVVPIVEKDRVSSMIVMTLSVEAPQGQGEVIYDLEPKIRDVFLRILFDHAAI HHHEECCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHH GGFRGAFINNENLDVVRRNLRDGAIKTFGEDLISDVLIFEIARQDY CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA