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The map label for this gene is flgH [H]

Identifier: 110677665

GI number: 110677665

Start: 257075

End: 257806

Strand: Direct

Name: flgH [H]

Synonym: RD1_0260

Alternate gene names: 110677665

Gene position: 257075-257806 (Clockwise)

Preceding gene: 110677664

Following gene: 110677666

Centisome position: 6.22

GC content: 53.14

Gene sequence:

>732_bases
ATGAAAAACGTCTTTTTATGCGTCATGACAGCTGCATTGGTAATGTCAGGCTGTGCAAGGTTGGACCACTTGGGCAAACC
ACCCTCGTTCAGCCCCGCAAGTGCTACAAAAGAACATACAGCGATGCTTTCTCCAGGGCTGCCGCTTCGCGTAGACACTT
CAACACCAACCGATGACGCGTCCTTGTGGTCAGGGGCACGGCAATCCTTGTTCGGCGATCGCAGGGCTGTACAGCAAGGT
GATATCCTGACAGTCGTCATCGAAATCGATGAAGAGGCGGAGATCTCCAACGCGACAGATCGATCGAGATCCGGATCGGA
GAGTTTGGGGATTCCGAGCCTGTTTGGTCTGCCTCAACGAATAGACAGAGAACTGCCGACGGGCGCGACACTTTCAGACG
CGGTTTCAATAAACTCTTCCAGTAATTCGTCCGGGGATGGATCGGTCAAAAGGAATGAAAAACTCACTCTTCGTGTCGCC
GCAACGATCGTTGACGTGCTGCCCAACGGCGTACTCTCGATCGCGGGAAGTCAGGAATTACGGGTGAATTTCGAAATGCG
TGAGTTGTTGGTGTCGGGGTACGTGCGACCCGAAGACATTTCCCGCAAGAATGAAATCACCTATGATAAAATCGCGACAG
CACGGGTCTCCTACGGTGGTCGCGGCCAGATCACGGATGTTCAACAGCCGCGCTGGGGTCAGCAAGCCCTTGATATCGTA
TTGCCTTATTGA

Upstream 100 bases:

>100_bases
TGGTGACAGAGTTCGCATCATGAATCTTGACTCGCGTGCAACACTCTTTGGCCAAGTACAGGCTGACGGTTCGGTAAGAG
TATCAAATTAGGAAAACTCA

Downstream 100 bases:

>100_bases
GGTCACAGTATGAAAAAGATCCTCCCTGTCTTGATGCTACTGCTTGGGTCTGCTGCAGGTGTGGGCGCAGGTGTATACCT
TAGGCCGCCACCAACAGAAG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKNVFLCVMTAALVMSGCARLDHLGKPPSFSPASATKEHTAMLSPGLPLRVDTSTPTDDASLWSGARQSLFGDRRAVQQG
DILTVVIEIDEEAEISNATDRSRSGSESLGIPSLFGLPQRIDRELPTGATLSDAVSINSSSNSSGDGSVKRNEKLTLRVA
ATIVDVLPNGVLSIAGSQELRVNFEMRELLVSGYVRPEDISRKNEITYDKIATARVSYGGRGQITDVQQPRWGQQALDIV
LPY

Sequences:

>Translated_243_residues
MKNVFLCVMTAALVMSGCARLDHLGKPPSFSPASATKEHTAMLSPGLPLRVDTSTPTDDASLWSGARQSLFGDRRAVQQG
DILTVVIEIDEEAEISNATDRSRSGSESLGIPSLFGLPQRIDRELPTGATLSDAVSINSSSNSSGDGSVKRNEKLTLRVA
ATIVDVLPNGVLSIAGSQELRVNFEMRELLVSGYVRPEDISRKNEITYDKIATARVSYGGRGQITDVQQPRWGQQALDIV
LPY
>Mature_243_residues
MKNVFLCVMTAALVMSGCARLDHLGKPPSFSPASATKEHTAMLSPGLPLRVDTSTPTDDASLWSGARQSLFGDRRAVQQG
DILTVVIEIDEEAEISNATDRSRSGSESLGIPSLFGLPQRIDRELPTGATLSDAVSINSSSNSSGDGSVKRNEKLTLRVA
ATIVDVLPNGVLSIAGSQELRVNFEMRELLVSGYVRPEDISRKNEITYDKIATARVSYGGRGQITDVQQPRWGQQALDIV
LPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=196, Percent_Identity=31.1224489795918, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26174; Mature: 26174

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVFLCVMTAALVMSGCARLDHLGKPPSFSPASATKEHTAMLSPGLPLRVDTSTPTDDA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCEEECCCCCCCHH
SLWSGARQSLFGDRRAVQQGDILTVVIEIDEEAEISNATDRSRSGSESLGIPSLFGLPQR
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
IDRELPTGATLSDAVSINSSSNSSGDGSVKRNEKLTLRVAATIVDVLPNGVLSIAGSQEL
HHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEECCCCEE
RVNFEMRELLVSGYVRPEDISRKNEITYDKIATARVSYGGRGQITDVQQPRWGQQALDIV
EECHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHEE
LPY
CCC
>Mature Secondary Structure
MKNVFLCVMTAALVMSGCARLDHLGKPPSFSPASATKEHTAMLSPGLPLRVDTSTPTDDA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCEEECCCCCCCHH
SLWSGARQSLFGDRRAVQQGDILTVVIEIDEEAEISNATDRSRSGSESLGIPSLFGLPQR
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
IDRELPTGATLSDAVSINSSSNSSGDGSVKRNEKLTLRVAATIVDVLPNGVLSIAGSQEL
HHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCEEEECCCCEE
RVNFEMRELLVSGYVRPEDISRKNEITYDKIATARVSYGGRGQITDVQQPRWGQQALDIV
EECHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHEE
LPY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA