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The map label for this gene is 110677645

Identifier: 110677645

GI number: 110677645

Start: 238716

End: 239705

Strand: Direct

Name: 110677645

Synonym: RD1_0239

Alternate gene names: NA

Gene position: 238716-239705 (Clockwise)

Preceding gene: 110677644

Following gene: 110677646

Centisome position: 5.78

GC content: 58.38

Gene sequence:

>990_bases
ATGAAAATGAAAAGAAAACTGATGGCAAGCGTCGCGACAGTGGCGCTGACGGTAACCTCTGCTGTCCCGGCTTTTGCGGC
GGAAAAATGGGACATGCCGATGGCCTATTCCGCGTCCAACTTCCATTCCGAAAACGGCGTCGCCTTTGCGGAATGTGTGG
GCGCGGGCACGAATGGCGAGATCACCATCGAAGTGCACGCGGGCGGGTCGCTCTTTGCCGGTGCCGACATCAAACGCGCG
ATCCAGACCGGGCAGGTTCAGATCGGCGAGCGTTTGCTGTCTGGTCACCAGAACGAAAGCGCCGTGTTCGGGTTTGACAG
TGTTCCGTTCCTCGCACCCTCATTTGAGGACAGCGAAAAGCTCTATGCGGCGGCCAAACCTTCCATCGAAGCTCTGCTGG
ATGAGCAAAACCTCGAACTGCTCTACGCCGTGCCATGGCCGCCTCAGGGGCTCTATTTCAAGAAGGAAGTCAACAGTGTG
GCCGATATGGCCGGTGTGAAATTCCGCTCTTACAACAATACAACCAGCCGTCTTGCCGAGTTGACGGGCATGTTGCCTGT
CACCGTGGAAGCCGCAGAAATCAGCCAGGCATTTGCCACCGGCGTTGCGGAAGCAATGGTGTCGTCGGGGGCCACAGGAT
ATGACCGCAAGGTCTGGGAAAGCCTGACCCATTTCTACGAAGTCGACGCATGGCTGCCGCGCAATTACGTGATGGTCAAT
CAGGATGTCTGGGCCGATGTGTCGGACGCCAACAAGGACGCAATCCGTGCCTGTGCCACCGAAGCAGAAGCCCGTGGTCT
GGAAGCGTCCAAAGCCTATACGCAATTCACCATGGATGGTCTGGCCGCTGGTGGGATGACGGTGCAGCCTGCGGGCGATG
CACTGATGGCGGAACTGCGCGCGATCGGTGAGACGATGACGACCGAATGGCTTGAGGCCGCGGGCGAGACCGGTGCTGCT
CTCGTTGATGCCTACAAAGCGGCTCAATAA

Upstream 100 bases:

>100_bases
GGCTTGTGGCGGGGCTTGTGATGGAGCACCCTGCCAATCAGGATCTCACCGCCTATGCACCACAGAGATTCCAAAACTAA
AAACCAACATGGAGAACACA

Downstream 100 bases:

>100_bases
AATTCGGCGGCGGCCCCAACAACGGGCCGCCGTTCGCCAAGGAACCGGGCACGGGAGCCTTTCATGACAGCACTGCGCAA
GACACTGGATTTTCTATACC

Product: peptide ABC transporter, solute-binding protein

Products: NA

Alternate protein names: Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter Subunit DctP; TRAP Dicarboxylate Transporter-DctP Subunit; Trap Dicarboxylate Transporter Dctp Subunit; Signal Peptide Protein; Exported Protein; Trap Transporter Periplasmic Protein; Twin-Arginine Translocation Pathway Signal; TRAP Transporter; TRAP Dicarboxylate Transporter; Trap Dicarboxylate Transporter-Dctp Subunit; TRAP-Type C4-Dicarboxylate Transporter Periplasmic Protein; Secreted Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKMKRKLMASVATVALTVTSAVPAFAAEKWDMPMAYSASNFHSENGVAFAECVGAGTNGEITIEVHAGGSLFAGADIKRA
IQTGQVQIGERLLSGHQNESAVFGFDSVPFLAPSFEDSEKLYAAAKPSIEALLDEQNLELLYAVPWPPQGLYFKKEVNSV
ADMAGVKFRSYNNTTSRLAELTGMLPVTVEAAEISQAFATGVAEAMVSSGATGYDRKVWESLTHFYEVDAWLPRNYVMVN
QDVWADVSDANKDAIRACATEAEARGLEASKAYTQFTMDGLAAGGMTVQPAGDALMAELRAIGETMTTEWLEAAGETGAA
LVDAYKAAQ

Sequences:

>Translated_329_residues
MKMKRKLMASVATVALTVTSAVPAFAAEKWDMPMAYSASNFHSENGVAFAECVGAGTNGEITIEVHAGGSLFAGADIKRA
IQTGQVQIGERLLSGHQNESAVFGFDSVPFLAPSFEDSEKLYAAAKPSIEALLDEQNLELLYAVPWPPQGLYFKKEVNSV
ADMAGVKFRSYNNTTSRLAELTGMLPVTVEAAEISQAFATGVAEAMVSSGATGYDRKVWESLTHFYEVDAWLPRNYVMVN
QDVWADVSDANKDAIRACATEAEARGLEASKAYTQFTMDGLAAGGMTVQPAGDALMAELRAIGETMTTEWLEAAGETGAA
LVDAYKAAQ
>Mature_329_residues
MKMKRKLMASVATVALTVTSAVPAFAAEKWDMPMAYSASNFHSENGVAFAECVGAGTNGEITIEVHAGGSLFAGADIKRA
IQTGQVQIGERLLSGHQNESAVFGFDSVPFLAPSFEDSEKLYAAAKPSIEALLDEQNLELLYAVPWPPQGLYFKKEVNSV
ADMAGVKFRSYNNTTSRLAELTGMLPVTVEAAEISQAFATGVAEAMVSSGATGYDRKVWESLTHFYEVDAWLPRNYVMVN
QDVWADVSDANKDAIRACATEAEARGLEASKAYTQFTMDGLAAGGMTVQPAGDALMAELRAIGETMTTEWLEAAGETGAA
LVDAYKAAQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35113; Mature: 35113

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKRKLMASVATVALTVTSAVPAFAAEKWDMPMAYSASNFHSENGVAFAECVGAGTNGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHCCCCCCE
ITIEVHAGGSLFAGADIKRAIQTGQVQIGERLLSGHQNESAVFGFDSVPFLAPSFEDSEK
EEEEEECCCCEEECHHHHHHHHHCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHH
LYAAAKPSIEALLDEQNLELLYAVPWPPQGLYFKKEVNSVADMAGVKFRSYNNTTSRLAE
EEECCCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHH
LTGMLPVTVEAAEISQAFATGVAEAMVSSGATGYDRKVWESLTHFYEVDAWLPRNYVMVN
HHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEC
QDVWADVSDANKDAIRACATEAEARGLEASKAYTQFTMDGLAAGGMTVQPAGDALMAELR
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH
AIGETMTTEWLEAAGETGAALVDAYKAAQ
HHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKMKRKLMASVATVALTVTSAVPAFAAEKWDMPMAYSASNFHSENGVAFAECVGAGTNGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHCCCCCCE
ITIEVHAGGSLFAGADIKRAIQTGQVQIGERLLSGHQNESAVFGFDSVPFLAPSFEDSEK
EEEEEECCCCEEECHHHHHHHHHCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHH
LYAAAKPSIEALLDEQNLELLYAVPWPPQGLYFKKEVNSVADMAGVKFRSYNNTTSRLAE
EEECCCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHH
LTGMLPVTVEAAEISQAFATGVAEAMVSSGATGYDRKVWESLTHFYEVDAWLPRNYVMVN
HHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEC
QDVWADVSDANKDAIRACATEAEARGLEASKAYTQFTMDGLAAGGMTVQPAGDALMAELR
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH
AIGETMTTEWLEAAGETGAALVDAYKAAQ
HHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA