Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is yeaS [C]

Identifier: 110677619

GI number: 110677619

Start: 208737

End: 209357

Strand: Direct

Name: yeaS [C]

Synonym: RD1_0211

Alternate gene names: 110677619

Gene position: 208737-209357 (Clockwise)

Preceding gene: 110677618

Following gene: 110677620

Centisome position: 5.05

GC content: 59.58

Gene sequence:

>621_bases
ATGACAATCTCCACCGCCGACCTGTTGCTTTACGCGGGTGCATTGATCATCTTGTTTCTGACACCGGGGCCGGTCTGGCT
GGCACTGATGGCGCGTGCGCTGTCGGGTGGGTTTGCGGCTGCCTGGCCACTGGCGTTCGGTGTGGCCGTGGGTGACATCC
TTTGGCCCTTGGTTGCGGTGCTGGGGATATCGTGGATCGTCTCTGTGTTTGATGTCTTCATGCTCGTGCTGCGCTGGGTG
GCTTGCGGCGTGTTCATCGTGATGGGCATCGCGCTGATCCGGCATGCGCGGCACTCCATCAGTGCTGACAGCCGGTTGAC
CAGACCCGGCGTTTCGGCAGGCTTTGCCGCGGGGGTCATTGCGATCCTCGGCAATCCCAAGGCGGTCTTGTTCTATATGG
GCGTGCTGCCCGGGTTTTTTGATCTGCGCGATGTAACGGGTGTTGATGTCACCGTGATCATCGCGGCTTCCGTGTGTATT
CCGCTGATCGGCAATCTGATGATAGCGGCCTGCGTCGGGCGCATCCGCAGCGTTATCACGCGGCCCCAGACGCTGGCACG
GATCAATGTCATCTCTGGCTGCTCGCTTATTCTGGTTGGTGTGTTGATCCCTGTATTATAA

Upstream 100 bases:

>100_bases
GGATGACGGGCACGGAAAAGAGCCTGTTTGATACGCTGGGCGACGGCGCGCAGTATTTCGAAATCACCGAAACGGACGGT
GCATCAACGGTGCAGGACGG

Downstream 100 bases:

>100_bases
CACAAAATATTGTGTCGGCGGCGTGACAACCGGAGAGAAAAACCGTATAACTCGGTCAAAATACGAAGGTATGACGACAT
GTCCGAAAACGATCAGACTC

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTISTADLLLYAGALIILFLTPGPVWLALMARALSGGFAAAWPLAFGVAVGDILWPLVAVLGISWIVSVFDVFMLVLRWV
ACGVFIVMGIALIRHARHSISADSRLTRPGVSAGFAAGVIAILGNPKAVLFYMGVLPGFFDLRDVTGVDVTVIIAASVCI
PLIGNLMIAACVGRIRSVITRPQTLARINVISGCSLILVGVLIPVL

Sequences:

>Translated_206_residues
MTISTADLLLYAGALIILFLTPGPVWLALMARALSGGFAAAWPLAFGVAVGDILWPLVAVLGISWIVSVFDVFMLVLRWV
ACGVFIVMGIALIRHARHSISADSRLTRPGVSAGFAAGVIAILGNPKAVLFYMGVLPGFFDLRDVTGVDVTVIIAASVCI
PLIGNLMIAACVGRIRSVITRPQTLARINVISGCSLILVGVLIPVL
>Mature_205_residues
TISTADLLLYAGALIILFLTPGPVWLALMARALSGGFAAAWPLAFGVAVGDILWPLVAVLGISWIVSVFDVFMLVLRWVA
CGVFIVMGIALIRHARHSISADSRLTRPGVSAGFAAGVIAILGNPKAVLFYMGVLPGFFDLRDVTGVDVTVIIAASVCIP
LIGNLMIAACVGRIRSVITRPQTLARINVISGCSLILVGVLIPVL

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21606; Mature: 21474

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISTADLLLYAGALIILFLTPGPVWLALMARALSGGFAAAWPLAFGVAVGDILWPLVAV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LGISWIVSVFDVFMLVLRWVACGVFIVMGIALIRHARHSISADSRLTRPGVSAGFAAGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AILGNPKAVLFYMGVLPGFFDLRDVTGVDVTVIIAASVCIPLIGNLMIAACVGRIRSVIT
HHHCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPQTLARINVISGCSLILVGVLIPVL
CCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TISTADLLLYAGALIILFLTPGPVWLALMARALSGGFAAAWPLAFGVAVGDILWPLVAV
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LGISWIVSVFDVFMLVLRWVACGVFIVMGIALIRHARHSISADSRLTRPGVSAGFAAGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AILGNPKAVLFYMGVLPGFFDLRDVTGVDVTVIIAASVCIPLIGNLMIAACVGRIRSVIT
HHHCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPQTLARINVISGCSLILVGVLIPVL
CCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]