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The map label for this gene is 110677590

Identifier: 110677590

GI number: 110677590

Start: 179316

End: 180008

Strand: Direct

Name: 110677590

Synonym: RD1_0182

Alternate gene names: NA

Gene position: 179316-180008 (Clockwise)

Preceding gene: 110677588

Following gene: 110677596

Centisome position: 4.34

GC content: 57.58

Gene sequence:

>693_bases
ATGATCAAACTACTGACCTTTCCACCGGCGTTCGGGCTCTTTGCGGCGAGCCCCTTCTGTGTAAAAGCTGCCTATCTCTT
GAACATGTCCGGCCAGAAGTGGGAGCGTGAGGATATGCTGGACCCGCGCAAGATGCCCTACGGAAAACTGCCTGCCATCC
GCGCAGGGGAGCGGCTGATTGCAGACAGCGACCGTATTCAGACATACCTTGAAAGCGAAGGTGCGGATTTCAACAAAGGG
TTATCGGACCTCGACAAGGCCAATGCCCGTGCGTTCATTCGCATGTCCGAGGAACATTTGTATTTTCATCTGGTGCTCGA
CCGATGGGCCGATGATGCCATTTGGCCCAAGGTGCGCGATGTCTATTTTTCTCAGGTTCCGCCCGGCCTGCGCCATGTCA
TCGCCGCCGGTGTGCGCAGAAAAACCCTGAGCGGGCTGCACAGCCAAGGTCTCGGTCGGCTCAGCCAGGAGGAACGTTTG
GCGAGAATAGAGCCTGATATTGATGCGATCACCATGCGCTTACGGCACAGTCATTTCCTGTTTGGGGACCAGCCAACGGC
CGCCGATGCCTCGGTCGCGCCTATGTTGGCGGCCGCAACCGCATCGCCGGGAGTAACGCTGATGGGCCGGATGATCGAAG
GGAATGAGGTCTTGATGGCCTATATCGCACGGGTCGATGAAAGCTGCGGCTAA

Upstream 100 bases:

>100_bases
ACGGTGAAAGCGATTGGCCGTTCTACGCAGCGCTTGTTGCAACCGTACAGATGTGTTGTCTAACATGCGCTGAGCATCGC
GCGTCACGCAGGATTGAATG

Downstream 100 bases:

>100_bases
CGGCGGCTGCGTTTCACCTTGCGTTTGATCTTATCCGCCTTACGCTTGGCTTTGACACCGCGCTTGCGCGGCGTGCGCCC
GGCGGGTGATCTGCGGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Transport Complex /Metaxin

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIKLLTFPPAFGLFAASPFCVKAAYLLNMSGQKWEREDMLDPRKMPYGKLPAIRAGERLIADSDRIQTYLESEGADFNKG
LSDLDKANARAFIRMSEEHLYFHLVLDRWADDAIWPKVRDVYFSQVPPGLRHVIAAGVRRKTLSGLHSQGLGRLSQEERL
ARIEPDIDAITMRLRHSHFLFGDQPTAADASVAPMLAAATASPGVTLMGRMIEGNEVLMAYIARVDESCG

Sequences:

>Translated_230_residues
MIKLLTFPPAFGLFAASPFCVKAAYLLNMSGQKWEREDMLDPRKMPYGKLPAIRAGERLIADSDRIQTYLESEGADFNKG
LSDLDKANARAFIRMSEEHLYFHLVLDRWADDAIWPKVRDVYFSQVPPGLRHVIAAGVRRKTLSGLHSQGLGRLSQEERL
ARIEPDIDAITMRLRHSHFLFGDQPTAADASVAPMLAAATASPGVTLMGRMIEGNEVLMAYIARVDESCG
>Mature_230_residues
MIKLLTFPPAFGLFAASPFCVKAAYLLNMSGQKWEREDMLDPRKMPYGKLPAIRAGERLIADSDRIQTYLESEGADFNKG
LSDLDKANARAFIRMSEEHLYFHLVLDRWADDAIWPKVRDVYFSQVPPGLRHVIAAGVRRKTLSGLHSQGLGRLSQEERL
ARIEPDIDAITMRLRHSHFLFGDQPTAADASVAPMLAAATASPGVTLMGRMIEGNEVLMAYIARVDESCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI24308336, Length=226, Percent_Identity=26.9911504424779, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI25149474, Length=231, Percent_Identity=29.4372294372294, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25605; Mature: 25605

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLLTFPPAFGLFAASPFCVKAAYLLNMSGQKWEREDMLDPRKMPYGKLPAIRAGERLI
CEEEEECCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHH
ADSDRIQTYLESEGADFNKGLSDLDKANARAFIRMSEEHLYFHLVLDRWADDAIWPKVRD
CCHHHHHHHHHHCCCCHHCCHHHHHHCCCEEEEEECCCCEEEEEEEHHCCCCCCCHHHHH
VYFSQVPPGLRHVIAAGVRRKTLSGLHSQGLGRLSQEERLARIEPDIDAITMRLRHSHFL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCEEE
FGDQPTAADASVAPMLAAATASPGVTLMGRMIEGNEVLMAYIARVDESCG
ECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKLLTFPPAFGLFAASPFCVKAAYLLNMSGQKWEREDMLDPRKMPYGKLPAIRAGERLI
CEEEEECCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHH
ADSDRIQTYLESEGADFNKGLSDLDKANARAFIRMSEEHLYFHLVLDRWADDAIWPKVRD
CCHHHHHHHHHHCCCCHHCCHHHHHHCCCEEEEEECCCCEEEEEEEHHCCCCCCCHHHHH
VYFSQVPPGLRHVIAAGVRRKTLSGLHSQGLGRLSQEERLARIEPDIDAITMRLRHSHFL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCEEE
FGDQPTAADASVAPMLAAATASPGVTLMGRMIEGNEVLMAYIARVDESCG
ECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA