| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110636009
Identifier: 110636009
GI number: 110636009
Start: 3971807
End: 3972466
Strand: Reverse
Name: 110636009
Synonym: Meso_3684
Alternate gene names: NA
Gene position: 3972466-3971807 (Counterclockwise)
Preceding gene: 110636010
Following gene: 110636008
Centisome position: 90.03
GC content: 64.85
Gene sequence:
>660_bases ATGCGTCACAGACACCATAATCATGGCACCGGCCGTGCCATAGCAGCCGGAATGCTGGGTGCTGCAGCTGGCGCCGTCGT CCTGATGGCCGCCCGCAGCATGATGAGAAACAACTATCCAACAGGCCCCGAGGACTCGCCGCGACACGCCTGGCGACGCG GCGCCAGCAGCCGGTGGCGCGAGGGGGCCGTGGTTGGCAGAAGCATTACGGTGAACGCGCCGCGAGAGGAGGTTTATTCC CGCTGGCGTGACTTCACGACCTTCCCGAACTTCATGGAAAATGTGGTCTCCGTGACGCCGCTCGACCAGACACGCTCGCG ATGGGTGGTGGAAGGGCCGGCCGGCAGCACGATTGAATTCGAGACAAGGATCACGGAGGATCGGCCCAACGAACTGATCG CCTGGGAGTCGGACGAGGACGCCGAAGTGCGCAACAGCGGCCGCGTCACGTTCCGTGATGCGCCGGGCGGCCGCGGCACG GAGATTGAGGCGGTCATTGCCTACGATCCTCCTGGCGGCGCTGTCGGCCGTATGGCGGCGAAACTCTTCCAGAAGGAGCC TGGGATCCAGGCAAAGCGGGAGCTCCGCCGTTTCAAGCAACTGATGGAAACGGGCGAGATCGCTACCGCCGCCTCCGGCT CAGCCGCACCCAGCACTTGA
Upstream 100 bases:
>100_bases GTCGTTTCCGCGGAGGCGCTGACAGCCGGTCTGCTGGAACATTCGGAGCGGGCATGGGTTTGGGCCGCATTGCCTTTGGC CTCACTCGAGGGAGCATCCG
Downstream 100 bases:
>100_bases GGGTGTAGCGAATGCGCGCCCTCGTCTGGCATGGAAAGCATGACGTTCGCGTGGAGACAGTTGACGATCCAAAGATCGTC AACCCGCGCGACGCGATCAT
Product: cyclase/dehydrase
Products: NA
Alternate protein names: Streptomyces Cyclase/Dehydrase Family; Polyketide Cyclase/Dehydrase; Integral Membrane Protein-Like Protein; Cyclase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRHRHHNHGTGRAIAAGMLGAAAGAVVLMAARSMMRNNYPTGPEDSPRHAWRRGASSRWREGAVVGRSITVNAPREEVYS RWRDFTTFPNFMENVVSVTPLDQTRSRWVVEGPAGSTIEFETRITEDRPNELIAWESDEDAEVRNSGRVTFRDAPGGRGT EIEAVIAYDPPGGAVGRMAAKLFQKEPGIQAKRELRRFKQLMETGEIATAASGSAAPST
Sequences:
>Translated_219_residues MRHRHHNHGTGRAIAAGMLGAAAGAVVLMAARSMMRNNYPTGPEDSPRHAWRRGASSRWREGAVVGRSITVNAPREEVYS RWRDFTTFPNFMENVVSVTPLDQTRSRWVVEGPAGSTIEFETRITEDRPNELIAWESDEDAEVRNSGRVTFRDAPGGRGT EIEAVIAYDPPGGAVGRMAAKLFQKEPGIQAKRELRRFKQLMETGEIATAASGSAAPST >Mature_219_residues MRHRHHNHGTGRAIAAGMLGAAAGAVVLMAARSMMRNNYPTGPEDSPRHAWRRGASSRWREGAVVGRSITVNAPREEVYS RWRDFTTFPNFMENVVSVTPLDQTRSRWVVEGPAGSTIEFETRITEDRPNELIAWESDEDAEVRNSGRVTFRDAPGGRGT EIEAVIAYDPPGGAVGRMAAKLFQKEPGIQAKRELRRFKQLMETGEIATAASGSAAPST
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24061; Mature: 24061
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRHHNHGTGRAIAAGMLGAAAGAVVLMAARSMMRNNYPTGPEDSPRHAWRRGASSRWR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHH EGAVVGRSITVNAPREEVYSRWRDFTTFPNFMENVVSVTPLDQTRSRWVVEGPAGSTIEF CCCEECCEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHCCEEEECCCCCEEEE ETRITEDRPNELIAWESDEDAEVRNSGRVTFRDAPGGRGTEIEAVIAYDPPGGAVGRMAA EEECCCCCCCCEEEECCCCCCHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHH KLFQKEPGIQAKRELRRFKQLMETGEIATAASGSAAPST HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRHRHHNHGTGRAIAAGMLGAAAGAVVLMAARSMMRNNYPTGPEDSPRHAWRRGASSRWR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHH EGAVVGRSITVNAPREEVYSRWRDFTTFPNFMENVVSVTPLDQTRSRWVVEGPAGSTIEF CCCEECCEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHCCEEEECCCCCEEEE ETRITEDRPNELIAWESDEDAEVRNSGRVTFRDAPGGRGTEIEAVIAYDPPGGAVGRMAA EEECCCCCCCCEEEECCCCCCHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHH KLFQKEPGIQAKRELRRFKQLMETGEIATAASGSAAPST HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA