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The map label for this gene is yliB [C]

Identifier: 110635969

GI number: 110635969

Start: 3935132

End: 3936733

Strand: Reverse

Name: yliB [C]

Synonym: Meso_3643

Alternate gene names: 110635969

Gene position: 3936733-3935132 (Counterclockwise)

Preceding gene: 110635970

Following gene: 110635968

Centisome position: 89.22

GC content: 61.05

Gene sequence:

>1602_bases
ATGACACTCTCGAGACGAGGATTTTTGTGCCGCTCCGCCGCCGCAGGCGCCCTTCTTTCCATGCCGCTCAAGGCGTTCGC
CCAGTCGGGAGAAATGGGCATGCTGCGAGTGGCGGTTTACACGGACATGGTGGGTTACGACCCGATCGTGACCACGTCGA
ACATCGCGGCCTATCATGGTGCGCTCGTGTACGACATGCTTTTCGGCAACGATGAAAACCAGATGCCGCATCCACAAATG
GTCGGCGACTACACGATATCCGAGGACAAGCTGACCTGGACGATGACGCTGCGAGACGGTCTGACCTTCTCCGACGGCAG
CCCTGTGACGACGGCCGACGTGATACCATCCATCCTGCGCTGGCAGGCGCGTGCCAGCCAGAACGGCAAGCTGCTGGCGG
CGGCTACGCAGGAGCTGGTGGCCTTGGACGACCGCACCTTCCAATTCAAGCTCAAGGAGCCGTTCCCGTTGTTGGCGGCA
ATGCTGGGCAGCCCGGCAACGCCACTGTGCTTCATCATGCGCAAGCGCGAGGCGGAAATGGATCCGGCTCAGGCGGTCGA
CGTCTGCATCGGCTCCGGCCCCTATGTGCTCAACACGCAGGAAACCCGTCCAGGTATCGACTACGTTTACGATCGTAATC
CGAACTATGTGCCCCGCGAGGAGCCCGCGAGCGGGCTTTCGGGCGCCAAGATTGCGAATTTCGAGCGCGTCATTCTGGTG
AACATGCCGGACGCTCAAACTGCGATCGCGGCGCTGCAGGCCGGTGAGATCGACTTCTACGAAATTCCGCCGATCGATTT
CCTCCCCGTTCTGGAAAGCGATTCAAATCTCAAGGTCGCCGACATCATGAAGTCCGGCACCGAGGGCTCCATCATTCTCA
ACTGGCTGCAGCCGCCCTTCGATAACCTGAAGGTGCGGCAGGCCATGCTGTATGCCATTGACCAGGAGGCGGTCCTGAAG
GGCCTCTTCGGCGATCCGAACTGGTTTAACGCGCATCCGAGCTGGTTCACCTACGGTTCGCCGCTTTACAACGAAGCGAA
CTCCGAGTGGTTCAGGATAGCGCCGGATCCGGAGAAGGCGAAGCAACTGCTGGCCGAGGGCGGCTACGACGGAACCCCGG
TCGTGCTTCTCCAGGCGACCGACCGCCAGGTCAATGCCGACGCCGTGACAATCATCGCGCAGCAGATGCGGGCGGCCGGC
TTCAACGTGCAGATCGACGCCATCGACTGGGCGACTCTGCTGCAGCGCAGGCCGAACAAGGGACCGGTTTCGGAGGGCGG
CTGGAATGCCTTCGTCTCCACCTTCAACGGCTTTATAAGCTCGAACCCCTACACATTCGGTCACATGGCCACGATCGGGG
AGAACGGGTGGTTCGGATGGCCTTCGGACGAACGCAACGAGGAACTGAAGGCCGCCTGGATGAAGGCCGAAACGCCTGAG
GAGCGGGTGGCGATTGCGGCGGAAATCCAGGAGAACGCCTGGAATATCGTGCCGCGCGTATCCTACGGGCATTGGGTGCA
ACCGGTCGCATATCGCAGCAACCTGGACGGCTTCGTTAGCATTCCCGGCGTACTTGCCTTCTGGAACGTCAAGCGAGTCT
GA

Upstream 100 bases:

>100_bases
ATTTCATGTAGCATAATTCGATATAGAAAATTACAATGCAATTCGCCTGAATGAGTAGCAATATCGCGTGGGCGTCTTTG
CAAAAATAAGGGGAACCAGC

Downstream 100 bases:

>100_bases
ACACGCCGATGCTCGGCCATTTCATCAAGGGACTGACCACCGCCATCCCCGTGATGGCGGTGGTCGCGATCATCGTCTTC
CTGCTGCTGTTCCTCGCGCC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MTLSRRGFLCRSAAAGALLSMPLKAFAQSGEMGMLRVAVYTDMVGYDPIVTTSNIAAYHGALVYDMLFGNDENQMPHPQM
VGDYTISEDKLTWTMTLRDGLTFSDGSPVTTADVIPSILRWQARASQNGKLLAAATQELVALDDRTFQFKLKEPFPLLAA
MLGSPATPLCFIMRKREAEMDPAQAVDVCIGSGPYVLNTQETRPGIDYVYDRNPNYVPREEPASGLSGAKIANFERVILV
NMPDAQTAIAALQAGEIDFYEIPPIDFLPVLESDSNLKVADIMKSGTEGSIILNWLQPPFDNLKVRQAMLYAIDQEAVLK
GLFGDPNWFNAHPSWFTYGSPLYNEANSEWFRIAPDPEKAKQLLAEGGYDGTPVVLLQATDRQVNADAVTIIAQQMRAAG
FNVQIDAIDWATLLQRRPNKGPVSEGGWNAFVSTFNGFISSNPYTFGHMATIGENGWFGWPSDERNEELKAAWMKAETPE
ERVAIAAEIQENAWNIVPRVSYGHWVQPVAYRSNLDGFVSIPGVLAFWNVKRV

Sequences:

>Translated_533_residues
MTLSRRGFLCRSAAAGALLSMPLKAFAQSGEMGMLRVAVYTDMVGYDPIVTTSNIAAYHGALVYDMLFGNDENQMPHPQM
VGDYTISEDKLTWTMTLRDGLTFSDGSPVTTADVIPSILRWQARASQNGKLLAAATQELVALDDRTFQFKLKEPFPLLAA
MLGSPATPLCFIMRKREAEMDPAQAVDVCIGSGPYVLNTQETRPGIDYVYDRNPNYVPREEPASGLSGAKIANFERVILV
NMPDAQTAIAALQAGEIDFYEIPPIDFLPVLESDSNLKVADIMKSGTEGSIILNWLQPPFDNLKVRQAMLYAIDQEAVLK
GLFGDPNWFNAHPSWFTYGSPLYNEANSEWFRIAPDPEKAKQLLAEGGYDGTPVVLLQATDRQVNADAVTIIAQQMRAAG
FNVQIDAIDWATLLQRRPNKGPVSEGGWNAFVSTFNGFISSNPYTFGHMATIGENGWFGWPSDERNEELKAAWMKAETPE
ERVAIAAEIQENAWNIVPRVSYGHWVQPVAYRSNLDGFVSIPGVLAFWNVKRV
>Mature_532_residues
TLSRRGFLCRSAAAGALLSMPLKAFAQSGEMGMLRVAVYTDMVGYDPIVTTSNIAAYHGALVYDMLFGNDENQMPHPQMV
GDYTISEDKLTWTMTLRDGLTFSDGSPVTTADVIPSILRWQARASQNGKLLAAATQELVALDDRTFQFKLKEPFPLLAAM
LGSPATPLCFIMRKREAEMDPAQAVDVCIGSGPYVLNTQETRPGIDYVYDRNPNYVPREEPASGLSGAKIANFERVILVN
MPDAQTAIAALQAGEIDFYEIPPIDFLPVLESDSNLKVADIMKSGTEGSIILNWLQPPFDNLKVRQAMLYAIDQEAVLKG
LFGDPNWFNAHPSWFTYGSPLYNEANSEWFRIAPDPEKAKQLLAEGGYDGTPVVLLQATDRQVNADAVTIIAQQMRAAGF
NVQIDAIDWATLLQRRPNKGPVSEGGWNAFVSTFNGFISSNPYTFGHMATIGENGWFGWPSDERNEELKAAWMKAETPEE
RVAIAAEIQENAWNIVPRVSYGHWVQPVAYRSNLDGFVSIPGVLAFWNVKRV

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=511, Percent_Identity=25.2446183953033, Blast_Score=112, Evalue=7e-26,
Organism=Escherichia coli, GI1789887, Length=322, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787762, Length=396, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789397, Length=441, Percent_Identity=21.7687074829932, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789966, Length=366, Percent_Identity=24.5901639344262, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58897; Mature: 58766

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSRRGFLCRSAAAGALLSMPLKAFAQSGEMGMLRVAVYTDMVGYDPIVTTSNIAAYHG
CCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEEECCCHHHHHH
ALVYDMLFGNDENQMPHPQMVGDYTISEDKLTWTMTLRDGLTFSDGSPVTTADVIPSILR
HEEEHEEECCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCEECCCCCCCHHHHHHHHHH
WQARASQNGKLLAAATQELVALDDRTFQFKLKEPFPLLAAMLGSPATPLCFIMRKREAEM
HHHHCCCCCCEEEEEHHHHHEECCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCC
DPAQAVDVCIGSGPYVLNTQETRPGIDYVYDRNPNYVPREEPASGLSGAKIANFERVILV
CHHHHHHEEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCEEEEE
NMPDAQTAIAALQAGEIDFYEIPPIDFLPVLESDSNLKVADIMKSGTEGSIILNWLQPPF
ECCCHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCEEHHHHHHCCCCCCEEEEECCCCC
DNLKVRQAMLYAIDQEAVLKGLFGDPNWFNAHPSWFTYGSPLYNEANSEWFRIAPDPEKA
CHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCHHHH
KQLLAEGGYDGTPVVLLQATDRQVNADAVTIIAQQMRAAGFNVQIDAIDWATLLQRRPNK
HHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCC
GPVSEGGWNAFVSTFNGFISSNPYTFGHMATIGENGWFGWPSDERNEELKAAWMKAETPE
CCCCCCCHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCH
ERVAIAAEIQENAWNIVPRVSYGHWVQPVAYRSNLDGFVSIPGVLAFWNVKRV
HHEEEEEEECCCCCCEEECCCCCCCCCCHHHHCCCCCEEECCCEEEEEEEECC
>Mature Secondary Structure 
TLSRRGFLCRSAAAGALLSMPLKAFAQSGEMGMLRVAVYTDMVGYDPIVTTSNIAAYHG
CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCEEECCCHHHHHH
ALVYDMLFGNDENQMPHPQMVGDYTISEDKLTWTMTLRDGLTFSDGSPVTTADVIPSILR
HEEEHEEECCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCEECCCCCCCHHHHHHHHHH
WQARASQNGKLLAAATQELVALDDRTFQFKLKEPFPLLAAMLGSPATPLCFIMRKREAEM
HHHHCCCCCCEEEEEHHHHHEECCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCC
DPAQAVDVCIGSGPYVLNTQETRPGIDYVYDRNPNYVPREEPASGLSGAKIANFERVILV
CHHHHHHEEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCEEEEE
NMPDAQTAIAALQAGEIDFYEIPPIDFLPVLESDSNLKVADIMKSGTEGSIILNWLQPPF
ECCCHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCEEHHHHHHCCCCCCEEEEECCCCC
DNLKVRQAMLYAIDQEAVLKGLFGDPNWFNAHPSWFTYGSPLYNEANSEWFRIAPDPEKA
CHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCHHHH
KQLLAEGGYDGTPVVLLQATDRQVNADAVTIIAQQMRAAGFNVQIDAIDWATLLQRRPNK
HHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCC
GPVSEGGWNAFVSTFNGFISSNPYTFGHMATIGENGWFGWPSDERNEELKAAWMKAETPE
CCCCCCCHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCH
ERVAIAAEIQENAWNIVPRVSYGHWVQPVAYRSNLDGFVSIPGVLAFWNVKRV
HHEEEEEEECCCCCCEEECCCCCCCCCCHHHHCCCCCEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]