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The map label for this gene is 110635950

Identifier: 110635950

GI number: 110635950

Start: 3910808

End: 3912919

Strand: Reverse

Name: 110635950

Synonym: Meso_3624

Alternate gene names: NA

Gene position: 3912919-3910808 (Counterclockwise)

Preceding gene: 110635952

Following gene: 110635949

Centisome position: 88.68

GC content: 62.5

Gene sequence:

>2112_bases
TTGTCTGGCGACACCGAGCACAAATTTATCGACGCTGCGGTCGAAGATGCCGAGAAGTTCGATTTCGGCTCAAAGCACAG
AAATTTAAACGGCTGGCAGAAAGCTACGATCGGCGCGCTGTGCGTGCTTTATGCGGTGTTCCACCTCATGGTGCTGAACT
TCGTGCAGCTCGATGCCTGGGTCTTCCGCGCGGTCCACGTCAATATCGCCGCGGTCATCGCTTTCGCCATGTATGCGCCC
TTCGGTCGGCCGGGCGAAAAAGTCCCCGCGATGGACATGCTGCTCTCCGTCGTCGCGATCGTAGCCACGGGCTATATCTG
GTGGAACCTCAACGCGCTGATCCTGCGCACCGGGGTCCTGATGACCACCACCGACGTCCTGGTAGCCACGGCCGGCATCG
TCGTGGTCATTGAGTTCACCCGCCGCACCTCCGGCCTCGCGCTGCCGATCCTCGCCGGAATCTTTATCCTATACGGCTTC
GTCGGGCCGTGGCTTCCGGGAGTCCTGTTTCATCGGGGATACAGCTTCGGCGAGTTCACGACCTTCGTTTACTCGATGGA
AGGCATCTTTGGCATCACCACCGCCGCCGCGGCACTCTATATCGTTCTCTTCGTGCTGTTCGCCGCCTTCCTCCAGGTTT
CCAAGGTCGGCGACTTTTTCATGAACCTGGCCTTCGGCGCCTTCGGCTGGCTGCGCGGCGGCCCGGCCAAGGTCTCGCTG
TTCGGTTCAATTCTCTTCGGCATGATCTCCGGCTCGGGTGTGGCCAACGTCGTCGCGTCCGGAACCTTCACCATCCCCGT
CATGAAGCGGGTGGGGTACAAGCCGTCGAGCGCAGGCGCGATCGAGGCTGCGGCCTCAACGGGCGGGCAACTCACGCCAC
CGATCATGGGTGCCGGCGCATTTATCATGGCGGAAGTAACGGGTATTCCCTACACCACGATCATCGTCGCGGCTCTCATA
CCCTGCCTCCTCTATTATTTCGCCGTCTACGTGCACATCGATCTGGAAGCGCGCAAGGAAGGCATCGAGGGCCTGCCCCG
CGCAGACCTGCCGCCGCTGAAGCCGATGATGCGCGACGCCTTCGTGCTTGCTCCTCTCGCAGTGCTTCTCATCTTTCTCT
TTGCCGGTTTCTCGATCATTTCGGCCGGCTCCTGGGGCATTGCGATCTCCGTTCTTGTGATGCTGCAGCAACGACTCGGC
ATCGACACGCGGGTTCACGCCGCGCCGATCCTGTGTGCGCTGGCGACGGTCGTGCTTCTGCCCGGCGTGCCTGCCAGCAC
GCATGGCGGCATCGCCTTTGCGGTCGGTCTCATCGCCATCCTGGCGGCCGCGATCGTCGGGCGGCATGCCGCACTGGCCG
ATGCGCTGAAAGGAACGGGCGTTGATATTCTCGAGGCGCTTTCCATCGGCACGCGCCAATCGCTTCAATTGGCAGCCGTC
TGCGCATGTGCCGGCATCGTCGTTGGCGTGATCGGTCTGACCGGGCTTGGCGGGCGGTTTTCGGCGCTGCTTTTGGGCGT
TGCCGGCCAGAGCGAAATGCTGGCGCTCGCCTTCGCCATGATCATCGCCCTGATCCTCGGCATGGGTATGCCGACCACCG
CAGCCTACGCCATCGCAGCCAGCGTGGTCGCGCCCGCCTTGCAGCGCATGGGGCTGCCAGTGCTGCCGGTGCATCTCTTT
ATCTTCTACTACGCGGTGATTTCGACGATCACGCCGCCGATCGCGCTTTCCGCCTTCGCGGGTGCTGCGCTGGCGGGCGC
CGATCCATGGAAGACGGCGTTCAAGTCGGTGCGCTACGGCATCGCCGCCTTCATCGTCCCGTTTCTGTTCATCCACAATC
AGGGCATCCTGTTGGAAGGCAGCGTCATCGACATCGTCAGGACGACGTTGACCGCGCTCATCGGGATCTGGGGCATCGCA
ACCGCCTCGGAAGGTTGGTTTGCCGGTCGTCTTTCGGCATTCCTGCGGATTGCCCTTGCAGCGGCGGCCCTGCTGCTCAT
CGCCGGCGACATTTACACCGACATCGCCGGCCTAGTCCTGATCGCGGCATTCGTCGCCTACAGGACGCTTCGCGCACGTT
CGCGCGCAGTTCACCACCCATCCGGAATTTGA

Upstream 100 bases:

>100_bases
GGAGTTTATCCCTAGCAACGTCGTTGACTCGCCGCAATTGCTTGACTAGGTACGTACTAGAAAATATGTACGTACCTGAT
TTGGCGAATGGGAGGAAGCC

Downstream 100 bases:

>100_bases
TCAGAGGAGGACAAAATGATCAGATCGATTATCTGCATACTCGGTATGGCGGCGATCCTGCCGGCCTCGGCCCAGGAGGC
CGACCGGAGCGACTGGCCCA

Product: TRAP transporter, 4TM/12TM fusion protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transport System Permease Protein; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transporter Fused Permeases; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; 4TM/12TM TRAP Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component

Number of amino acids: Translated: 703; Mature: 702

Protein sequence:

>703_residues
MSGDTEHKFIDAAVEDAEKFDFGSKHRNLNGWQKATIGALCVLYAVFHLMVLNFVQLDAWVFRAVHVNIAAVIAFAMYAP
FGRPGEKVPAMDMLLSVVAIVATGYIWWNLNALILRTGVLMTTTDVLVATAGIVVVIEFTRRTSGLALPILAGIFILYGF
VGPWLPGVLFHRGYSFGEFTTFVYSMEGIFGITTAAAALYIVLFVLFAAFLQVSKVGDFFMNLAFGAFGWLRGGPAKVSL
FGSILFGMISGSGVANVVASGTFTIPVMKRVGYKPSSAGAIEAAASTGGQLTPPIMGAGAFIMAEVTGIPYTTIIVAALI
PCLLYYFAVYVHIDLEARKEGIEGLPRADLPPLKPMMRDAFVLAPLAVLLIFLFAGFSIISAGSWGIAISVLVMLQQRLG
IDTRVHAAPILCALATVVLLPGVPASTHGGIAFAVGLIAILAAAIVGRHAALADALKGTGVDILEALSIGTRQSLQLAAV
CACAGIVVGVIGLTGLGGRFSALLLGVAGQSEMLALAFAMIIALILGMGMPTTAAYAIAASVVAPALQRMGLPVLPVHLF
IFYYAVISTITPPIALSAFAGAALAGADPWKTAFKSVRYGIAAFIVPFLFIHNQGILLEGSVIDIVRTTLTALIGIWGIA
TASEGWFAGRLSAFLRIALAAAALLLIAGDIYTDIAGLVLIAAFVAYRTLRARSRAVHHPSGI

Sequences:

>Translated_703_residues
MSGDTEHKFIDAAVEDAEKFDFGSKHRNLNGWQKATIGALCVLYAVFHLMVLNFVQLDAWVFRAVHVNIAAVIAFAMYAP
FGRPGEKVPAMDMLLSVVAIVATGYIWWNLNALILRTGVLMTTTDVLVATAGIVVVIEFTRRTSGLALPILAGIFILYGF
VGPWLPGVLFHRGYSFGEFTTFVYSMEGIFGITTAAAALYIVLFVLFAAFLQVSKVGDFFMNLAFGAFGWLRGGPAKVSL
FGSILFGMISGSGVANVVASGTFTIPVMKRVGYKPSSAGAIEAAASTGGQLTPPIMGAGAFIMAEVTGIPYTTIIVAALI
PCLLYYFAVYVHIDLEARKEGIEGLPRADLPPLKPMMRDAFVLAPLAVLLIFLFAGFSIISAGSWGIAISVLVMLQQRLG
IDTRVHAAPILCALATVVLLPGVPASTHGGIAFAVGLIAILAAAIVGRHAALADALKGTGVDILEALSIGTRQSLQLAAV
CACAGIVVGVIGLTGLGGRFSALLLGVAGQSEMLALAFAMIIALILGMGMPTTAAYAIAASVVAPALQRMGLPVLPVHLF
IFYYAVISTITPPIALSAFAGAALAGADPWKTAFKSVRYGIAAFIVPFLFIHNQGILLEGSVIDIVRTTLTALIGIWGIA
TASEGWFAGRLSAFLRIALAAAALLLIAGDIYTDIAGLVLIAAFVAYRTLRARSRAVHHPSGI
>Mature_702_residues
SGDTEHKFIDAAVEDAEKFDFGSKHRNLNGWQKATIGALCVLYAVFHLMVLNFVQLDAWVFRAVHVNIAAVIAFAMYAPF
GRPGEKVPAMDMLLSVVAIVATGYIWWNLNALILRTGVLMTTTDVLVATAGIVVVIEFTRRTSGLALPILAGIFILYGFV
GPWLPGVLFHRGYSFGEFTTFVYSMEGIFGITTAAAALYIVLFVLFAAFLQVSKVGDFFMNLAFGAFGWLRGGPAKVSLF
GSILFGMISGSGVANVVASGTFTIPVMKRVGYKPSSAGAIEAAASTGGQLTPPIMGAGAFIMAEVTGIPYTTIIVAALIP
CLLYYFAVYVHIDLEARKEGIEGLPRADLPPLKPMMRDAFVLAPLAVLLIFLFAGFSIISAGSWGIAISVLVMLQQRLGI
DTRVHAAPILCALATVVLLPGVPASTHGGIAFAVGLIAILAAAIVGRHAALADALKGTGVDILEALSIGTRQSLQLAAVC
ACAGIVVGVIGLTGLGGRFSALLLGVAGQSEMLALAFAMIIALILGMGMPTTAAYAIAASVVAPALQRMGLPVLPVHLFI
FYYAVISTITPPIALSAFAGAALAGADPWKTAFKSVRYGIAAFIVPFLFIHNQGILLEGSVIDIVRTTLTALIGIWGIAT
ASEGWFAGRLSAFLRIALAAAALLLIAGDIYTDIAGLVLIAAFVAYRTLRARSRAVHHPSGI

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73696; Mature: 73564

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDTEHKFIDAAVEDAEKFDFGSKHRNLNGWQKATIGALCVLYAVFHLMVLNFVQLDAW
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFRAVHVNIAAVIAFAMYAPFGRPGEKVPAMDMLLSVVAIVATGYIWWNLNALILRTGVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECHHHHHHCCHH
MTTTDVLVATAGIVVVIEFTRRTSGLALPILAGIFILYGFVGPWLPGVLFHRGYSFGEFT
HHHHHHHHHHCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TFVYSMEGIFGITTAAAALYIVLFVLFAAFLQVSKVGDFFMNLAFGAFGWLRGGPAKVSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FGSILFGMISGSGVANVVASGTFTIPVMKRVGYKPSSAGAIEAAASTGGQLTPPIMGAGA
HHHHHHHHHCCCCHHHHHHCCCEEEHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHCCCC
FIMAEVTGIPYTTIIVAALIPCLLYYFAVYVHIDLEARKEGIEGLPRADLPPLKPMMRDA
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCCCCCCCCCHHHHHHH
FVLAPLAVLLIFLFAGFSIISAGSWGIAISVLVMLQQRLGIDTRVHAAPILCALATVVLL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
PGVPASTHGGIAFAVGLIAILAAAIVGRHAALADALKGTGVDILEALSIGTRQSLQLAAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
CACAGIVVGVIGLTGLGGRFSALLLGVAGQSEMLALAFAMIIALILGMGMPTTAAYAIAA
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SVVAPALQRMGLPVLPVHLFIFYYAVISTITPPIALSAFAGAALAGADPWKTAFKSVRYG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IAAFIVPFLFIHNQGILLEGSVIDIVRTTLTALIGIWGIATASEGWFAGRLSAFLRIALA
HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AAALLLIAGDIYTDIAGLVLIAAFVAYRTLRARSRAVHHPSGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGDTEHKFIDAAVEDAEKFDFGSKHRNLNGWQKATIGALCVLYAVFHLMVLNFVQLDAW
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFRAVHVNIAAVIAFAMYAPFGRPGEKVPAMDMLLSVVAIVATGYIWWNLNALILRTGVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECHHHHHHCCHH
MTTTDVLVATAGIVVVIEFTRRTSGLALPILAGIFILYGFVGPWLPGVLFHRGYSFGEFT
HHHHHHHHHHCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TFVYSMEGIFGITTAAAALYIVLFVLFAAFLQVSKVGDFFMNLAFGAFGWLRGGPAKVSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FGSILFGMISGSGVANVVASGTFTIPVMKRVGYKPSSAGAIEAAASTGGQLTPPIMGAGA
HHHHHHHHHCCCCHHHHHHCCCEEEHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHCCCC
FIMAEVTGIPYTTIIVAALIPCLLYYFAVYVHIDLEARKEGIEGLPRADLPPLKPMMRDA
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCCCCCCCCCCCCCHHHHHHH
FVLAPLAVLLIFLFAGFSIISAGSWGIAISVLVMLQQRLGIDTRVHAAPILCALATVVLL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
PGVPASTHGGIAFAVGLIAILAAAIVGRHAALADALKGTGVDILEALSIGTRQSLQLAAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
CACAGIVVGVIGLTGLGGRFSALLLGVAGQSEMLALAFAMIIALILGMGMPTTAAYAIAA
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SVVAPALQRMGLPVLPVHLFIFYYAVISTITPPIALSAFAGAALAGADPWKTAFKSVRYG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IAAFIVPFLFIHNQGILLEGSVIDIVRTTLTALIGIWGIATASEGWFAGRLSAFLRIALA
HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AAALLLIAGDIYTDIAGLVLIAAFVAYRTLRARSRAVHHPSGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA