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The map label for this gene is rspA [C]

Identifier: 110635946

GI number: 110635946

Start: 3905864

End: 3907030

Strand: Reverse

Name: rspA [C]

Synonym: Meso_3620

Alternate gene names: 110635946

Gene position: 3907030-3905864 (Counterclockwise)

Preceding gene: 110635947

Following gene: 110635939

Centisome position: 88.55

GC content: 63.41

Gene sequence:

>1167_bases
ATGAAGATCGTTCGCATCCTGGAGAAAGACCTGCCGATAACGTCTCCAGGCGCCAATGCGGTGGTCGACTTCGCCGGGCT
AACGACGTCGGCGGTCGCGATCGTGACCGATGCGTTCCGGGACGGAAAGCCGCTTGTCGGATACGGCTTCGGATCGATTG
GCCGGTGGTCGGTCGGCGGCATGCTGCGCGAGCGCTTCATCCCCCGGATCTTGGCAGTCGAACCGGCGAGCCTTCAGGAC
GAGACGGGGAACATCGATCCGTTTGCCTGCTGGAACGCCGCGATGCGCAACGAAAAACCCGGCGGCCACGGCGACCGCGC
GACCGCCTTGGGAGCGCTCGACATGGCCTTGTGGGATCTGCGGGCGAAGGCGGACGGCGTTCCGCTTTACCGCCTCCTGG
CGGACCGATACCGTGACGGGCAGGCCGACGAGGACGTCGCGGTCTATGCGGCCGGGGGATACTACCAACCCGGCAGCAAT
TATCGTTCGCTCCAAGACGAACTCAAGGGCTATATCGATCGCGGCTACAACGAGGTGAAGATCAAGATCGGCGGCGCACC
GCTCGCCGAGGACATGAGGCGGATCGAAGCCGCCATCGCGGTTTTAGGCGACGGGGCGCGGCTTGCCGTTGATGCCAACG
GACGCTTCGACCTGGAAACCGCCCTTGCCTATGGCCGCGCCATGAGCGACTACGGTCTTCGCTGGTACGAGGAGCCAGGC
GACCCGCTCGATTTCCGGCTAATGGCAGTGCTCGCCGAACATTACGACGGGCCGCTCGCCACGGGCGAGAACCTCTTTTC
GTCGCAGGACGCGCGCAATCTCCTGCGCTATGGTGGGATGCGGGCCGAGCGCGATTTCGTGCAATTCGACTGCGGCCTCG
CCTATGGCCTGCCGGACTACCTCAAAGTGCTGGACATCATGCGTCGGCACGGCTGGTCGCCAAGACGCCTGCATCCCCAT
GGCGGACACCAAATGTCGCTTCACCTTGCAGCAGGCCTCGGCCTTGGCGGCAACGAAAGCTATCCGGGGGTCTTCCAGCC
CCTCGGCGGCTTTGCAGACTGTTCGAAGGTGGAAAACGGACGAGTTCGATTGCCCGATGCGCCAGGCGTCGGGCTCGAAC
TCAAATCCGAGTTGAAGACATGGCTTGACGAAGCGTTCGAAATTTAG

Upstream 100 bases:

>100_bases
CCTGCGCCCGTTTCGGCGTGATCTCCATGCAGGATTACGACGCTCTGATCGATCCGGCGCGCATGGCAAATGGCGGCCGC
ATGAAGGAAGGGGAGAGGGA

Downstream 100 bases:

>100_bases
CCAGCCTGCTTCTGGCGTGTGAGCGTTTGCTCATCGCCTGAAAGCTCGGTTTGCCTGGGTTCATTACTGCTAGCGTCTGC
TGACCACGATCGACGGTCGA

Product: mandelate racemase/muconate lactonizing-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKIVRILEKDLPITSPGANAVVDFAGLTTSAVAIVTDAFRDGKPLVGYGFGSIGRWSVGGMLRERFIPRILAVEPASLQD
ETGNIDPFACWNAAMRNEKPGGHGDRATALGALDMALWDLRAKADGVPLYRLLADRYRDGQADEDVAVYAAGGYYQPGSN
YRSLQDELKGYIDRGYNEVKIKIGGAPLAEDMRRIEAAIAVLGDGARLAVDANGRFDLETALAYGRAMSDYGLRWYEEPG
DPLDFRLMAVLAEHYDGPLATGENLFSSQDARNLLRYGGMRAERDFVQFDCGLAYGLPDYLKVLDIMRRHGWSPRRLHPH
GGHQMSLHLAAGLGLGGNESYPGVFQPLGGFADCSKVENGRVRLPDAPGVGLELKSELKTWLDEAFEI

Sequences:

>Translated_388_residues
MKIVRILEKDLPITSPGANAVVDFAGLTTSAVAIVTDAFRDGKPLVGYGFGSIGRWSVGGMLRERFIPRILAVEPASLQD
ETGNIDPFACWNAAMRNEKPGGHGDRATALGALDMALWDLRAKADGVPLYRLLADRYRDGQADEDVAVYAAGGYYQPGSN
YRSLQDELKGYIDRGYNEVKIKIGGAPLAEDMRRIEAAIAVLGDGARLAVDANGRFDLETALAYGRAMSDYGLRWYEEPG
DPLDFRLMAVLAEHYDGPLATGENLFSSQDARNLLRYGGMRAERDFVQFDCGLAYGLPDYLKVLDIMRRHGWSPRRLHPH
GGHQMSLHLAAGLGLGGNESYPGVFQPLGGFADCSKVENGRVRLPDAPGVGLELKSELKTWLDEAFEI
>Mature_388_residues
MKIVRILEKDLPITSPGANAVVDFAGLTTSAVAIVTDAFRDGKPLVGYGFGSIGRWSVGGMLRERFIPRILAVEPASLQD
ETGNIDPFACWNAAMRNEKPGGHGDRATALGALDMALWDLRAKADGVPLYRLLADRYRDGQADEDVAVYAAGGYYQPGSN
YRSLQDELKGYIDRGYNEVKIKIGGAPLAEDMRRIEAAIAVLGDGARLAVDANGRFDLETALAYGRAMSDYGLRWYEEPG
DPLDFRLMAVLAEHYDGPLATGENLFSSQDARNLLRYGGMRAERDFVQFDCGLAYGLPDYLKVLDIMRRHGWSPRRLHPH
GGHQMSLHLAAGLGLGGNESYPGVFQPLGGFADCSKVENGRVRLPDAPGVGLELKSELKTWLDEAFEI

Specific function: Probably Involved In The Degradation Of Homoserine Lactone (Hsl) Or Of A Metabolite Of Hsl That Signals Starvation. [C]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: NA

Molecular weight: Translated: 42370; Mature: 42370

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVRILEKDLPITSPGANAVVDFAGLTTSAVAIVTDAFRDGKPLVGYGFGSIGRWSVGG
CHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
MLRERFIPRILAVEPASLQDETGNIDPFACWNAAMRNEKPGGHGDRATALGALDMALWDL
HHHHHHCCHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
RAKADGVPLYRLLADRYRDGQADEDVAVYAAGGYYQPGSNYRSLQDELKGYIDRGYNEVK
HHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHHCCCCEEE
IKIGGAPLAEDMRRIEAAIAVLGDGARLAVDANGRFDLETALAYGRAMSDYGLRWYEEPG
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCC
DPLDFRLMAVLAEHYDGPLATGENLFSSQDARNLLRYGGMRAERDFVQFDCGLAYGLPDY
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEECCHHCCCHHH
LKVLDIMRRHGWSPRRLHPHGGHQMSLHLAAGLGLGGNESYPGVFQPLGGFADCSKVENG
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHCCCC
RVRLPDAPGVGLELKSELKTWLDEAFEI
EEECCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIVRILEKDLPITSPGANAVVDFAGLTTSAVAIVTDAFRDGKPLVGYGFGSIGRWSVGG
CHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
MLRERFIPRILAVEPASLQDETGNIDPFACWNAAMRNEKPGGHGDRATALGALDMALWDL
HHHHHHCCHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
RAKADGVPLYRLLADRYRDGQADEDVAVYAAGGYYQPGSNYRSLQDELKGYIDRGYNEVK
HHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHHCCCCEEE
IKIGGAPLAEDMRRIEAAIAVLGDGARLAVDANGRFDLETALAYGRAMSDYGLRWYEEPG
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCC
DPLDFRLMAVLAEHYDGPLATGENLFSSQDARNLLRYGGMRAERDFVQFDCGLAYGLPDY
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHEEECCHHCCCHHH
LKVLDIMRRHGWSPRRLHPHGGHQMSLHLAAGLGLGGNESYPGVFQPLGGFADCSKVENG
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHCCCC
RVRLPDAPGVGLELKSELKTWLDEAFEI
EEECCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8277241 [H]