| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is torZ [C]
Identifier: 110635937
GI number: 110635937
Start: 3895091
End: 3897370
Strand: Reverse
Name: torZ [C]
Synonym: Meso_3611
Alternate gene names: 110635937
Gene position: 3897370-3895091 (Counterclockwise)
Preceding gene: 110635938
Following gene: 110635935
Centisome position: 88.33
GC content: 57.98
Gene sequence:
>2280_bases ATGACGCGCTACACAGTATCCCATTGGGGCATCTATGAATACGACGAGACCGAGGAAGCTCCTCGGTTGCGCCCTCTGCG GTCAGATCCCGACCCGTCGATGATTGGTCTTTACCAATTGGATCCCAAACTGCTCGAAAGCCGTATCAAGCGGCCTTCCA TTCGCAGAAGTTGGCTTCAACATGGCCCCGGCGCCCATCCGGAGCTACGGGGGAAAGAACCCTTCGTGGAGGTGGAGTGG GAGCTTGCTCTTGATCTTATTTCGGCGGAACTGAAGCGAGTGAAGCGCGAATATGGCAACAGCGCCATTTTCGGAGGGTC CTACGGATGGGCCAGTGCGGGCCGCTTTCATCACGCGCAGAGTCAGGTTCACCGGTTTCTGAACTGCATCGGCGGCTACG TCCGGCACACGGGCTCCTATTCTCTAGGCGCAGCTCACGTCATTCTGCCGCATATCGCAGGTACGGTGGCGGATCTGAGC GCTGAGCACACGACCTGGGATGTTCTTGCCGAGCACACGGAACTGTTCGTGACCTTCGGTGGCGTTCCGACCAAGAATGC TCAATCCTCACCGGGCGGTGCGGGCCACCATCGGGTCGGCCCAGGCCTGAAGGCTATGGCCGAAAAAGGCGTCCGTTTTG TCAATATCGGGCCCTGTAACGACAATATCGCGGCGGAATGCAAGGCAGAATGGATTCGTTGCCGGCCGAATTCCGACGTG GCTCTCATGCTCGCCCTTGCTTGGCAGCTCGTGGAAGATGACGCTCATGATCAAGCGTTTCTCCGCCGCTATACGGTGGG TTTTGAGAAGTTCCTTCCTTACCTTTTGGGTGATGATGATGGCGTGGCGAAGACCCCCGCTTGGGCGGCTGAGCTCACGG GAGTTCAAGCCGATCGAATCGTGAGCCTTGCGCGCCAGATGGCCCGCTCCCGTACGATGGTGAACATTGCTTGGTCATTG CAACGGGCCCATCACGGCGAACAGGCATTCTGGATGGCGATAACGCTCGCGGCGATGATCGGCCAGATCGGATTGCCTGG GGGCGGATTCGGCGTCGGGTACGGTCCAATGAATGCCAACGGATCCCCACACCGCCGCCTTTCAGGCCCGACCCTTTCGC AAGGCAGGAATGCCGTTCAGGATTACATCCCTTGCGCCAGAATAGCGGACATGTTGCTCAATCCCGGCGCAACATTCGAG CATGACGGGGCCTTGCGGACCTATCCCGACATTCAATTGATCTATTGGGCTGGCGGCAATCCCTATCATCATCATCAGGA TCTCAATCGGCTCAATCGGGCTTGGCAGAAGCCGCAGACGATCATCGTACACGATCCGTTCTGGACAGCGAGCGCCAAGC GCGCTGACATCGCCCTGCCCGTGACAACTGCGATGGAACGGAACGATATCGGCTACGCGACGCAAGAAGGCTTTTTGGTT GCGATGCGTCAGATAGTGGAGCCGTTCGGCGACGCCCGCTCCGACTATCAAATTTTCGCTTCGCTCGCCAACCGCATGGG TGTGGGCGAACAATTCACGGAAGGGCGTGATGATCAAGCCTGGTTATCTCACATCTATGAGGAAACGCGTGAGCACTGGC TCCGAGAGGGCATCAAGTGCCCCGATTTCGAAACCTTCTGGGAGCAAGGCCTCATAGATCTCGCGGAACAGGCCAAACCG CGCGTTATGTTTGAGGATTTCCGGAATGCGCCGGAGGCGCACCCACTCACCACGCCCTCCGGCCGCATCGAGATCTTTTC GGAGACAATAGCATCCTTCAATTTGCCAGACTGCAAGGGGCATCCCGCTTGGTTCGAGCCGCGAGAGTGGCTGGGTACAG CCGGGCCTGGCATGTTGCACCTTCTTACCGACCAGCCCGCGCGCAAATTGCACAGCCAGCTCGATGCCAGTCCCTATAGC GCTGCTGGCAAGGTGAACGGACGTGAGTGCATCTATATGAATCCTGCCGATGCCGAGACGCGCGGTCTTTCTCAAAACGA TACGGTAGAGGTCTGGAACCGAAGAGGTCGGTGCCTCGCATCCGTCAGCATAACCGATGAAATCATGCAGGGTGTCGTTA GGATTTCAACGGGAGCATGGTACGATCCCGATGAACGGGGCTGTGATCTGCACGGAAACCCCAATGTGTTGACACTAGAC ATCGGTACTTCTTCTCTCGGACAGGGATGTGCAGCCCAGACCTGCTTGGTAAGCTTACGCGGCCCTCTGCGAAATGCTCC AGAACCTAACCCGTTTCGGCGACCGCAGCTCGTTCCTTGA
Upstream 100 bases:
>100_bases TCCATCGGGGTCGTCCAAGCCGACACGAGAATCCCGTCCTGATCTGCGTCGAAGCCTTCCTACAATTCCACCGCGACTAA GCTCATTCACAGGACTTTAC
Downstream 100 bases:
>100_bases CCGCAAGCGCCAAGTTGCCAAGCCGATCCGGAAGCGCAGACCATGGCTTAGGATCTAGTGGTTTCGTTGCAAATTTTCGG TGAGTCGAACGGAAGCTTAT
Product: molybdopterin oxidoreductase
Products: Biotin [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 759; Mature: 758
Protein sequence:
>759_residues MTRYTVSHWGIYEYDETEEAPRLRPLRSDPDPSMIGLYQLDPKLLESRIKRPSIRRSWLQHGPGAHPELRGKEPFVEVEW ELALDLISAELKRVKREYGNSAIFGGSYGWASAGRFHHAQSQVHRFLNCIGGYVRHTGSYSLGAAHVILPHIAGTVADLS AEHTTWDVLAEHTELFVTFGGVPTKNAQSSPGGAGHHRVGPGLKAMAEKGVRFVNIGPCNDNIAAECKAEWIRCRPNSDV ALMLALAWQLVEDDAHDQAFLRRYTVGFEKFLPYLLGDDDGVAKTPAWAAELTGVQADRIVSLARQMARSRTMVNIAWSL QRAHHGEQAFWMAITLAAMIGQIGLPGGGFGVGYGPMNANGSPHRRLSGPTLSQGRNAVQDYIPCARIADMLLNPGATFE HDGALRTYPDIQLIYWAGGNPYHHHQDLNRLNRAWQKPQTIIVHDPFWTASAKRADIALPVTTAMERNDIGYATQEGFLV AMRQIVEPFGDARSDYQIFASLANRMGVGEQFTEGRDDQAWLSHIYEETREHWLREGIKCPDFETFWEQGLIDLAEQAKP RVMFEDFRNAPEAHPLTTPSGRIEIFSETIASFNLPDCKGHPAWFEPREWLGTAGPGMLHLLTDQPARKLHSQLDASPYS AAGKVNGRECIYMNPADAETRGLSQNDTVEVWNRRGRCLASVSITDEIMQGVVRISTGAWYDPDERGCDLHGNPNVLTLD IGTSSLGQGCAAQTCLVSLRGPLRNAPEPNPFRRPQLVP
Sequences:
>Translated_759_residues MTRYTVSHWGIYEYDETEEAPRLRPLRSDPDPSMIGLYQLDPKLLESRIKRPSIRRSWLQHGPGAHPELRGKEPFVEVEW ELALDLISAELKRVKREYGNSAIFGGSYGWASAGRFHHAQSQVHRFLNCIGGYVRHTGSYSLGAAHVILPHIAGTVADLS AEHTTWDVLAEHTELFVTFGGVPTKNAQSSPGGAGHHRVGPGLKAMAEKGVRFVNIGPCNDNIAAECKAEWIRCRPNSDV ALMLALAWQLVEDDAHDQAFLRRYTVGFEKFLPYLLGDDDGVAKTPAWAAELTGVQADRIVSLARQMARSRTMVNIAWSL QRAHHGEQAFWMAITLAAMIGQIGLPGGGFGVGYGPMNANGSPHRRLSGPTLSQGRNAVQDYIPCARIADMLLNPGATFE HDGALRTYPDIQLIYWAGGNPYHHHQDLNRLNRAWQKPQTIIVHDPFWTASAKRADIALPVTTAMERNDIGYATQEGFLV AMRQIVEPFGDARSDYQIFASLANRMGVGEQFTEGRDDQAWLSHIYEETREHWLREGIKCPDFETFWEQGLIDLAEQAKP RVMFEDFRNAPEAHPLTTPSGRIEIFSETIASFNLPDCKGHPAWFEPREWLGTAGPGMLHLLTDQPARKLHSQLDASPYS AAGKVNGRECIYMNPADAETRGLSQNDTVEVWNRRGRCLASVSITDEIMQGVVRISTGAWYDPDERGCDLHGNPNVLTLD IGTSSLGQGCAAQTCLVSLRGPLRNAPEPNPFRRPQLVP >Mature_758_residues TRYTVSHWGIYEYDETEEAPRLRPLRSDPDPSMIGLYQLDPKLLESRIKRPSIRRSWLQHGPGAHPELRGKEPFVEVEWE LALDLISAELKRVKREYGNSAIFGGSYGWASAGRFHHAQSQVHRFLNCIGGYVRHTGSYSLGAAHVILPHIAGTVADLSA EHTTWDVLAEHTELFVTFGGVPTKNAQSSPGGAGHHRVGPGLKAMAEKGVRFVNIGPCNDNIAAECKAEWIRCRPNSDVA LMLALAWQLVEDDAHDQAFLRRYTVGFEKFLPYLLGDDDGVAKTPAWAAELTGVQADRIVSLARQMARSRTMVNIAWSLQ RAHHGEQAFWMAITLAAMIGQIGLPGGGFGVGYGPMNANGSPHRRLSGPTLSQGRNAVQDYIPCARIADMLLNPGATFEH DGALRTYPDIQLIYWAGGNPYHHHQDLNRLNRAWQKPQTIIVHDPFWTASAKRADIALPVTTAMERNDIGYATQEGFLVA MRQIVEPFGDARSDYQIFASLANRMGVGEQFTEGRDDQAWLSHIYEETREHWLREGIKCPDFETFWEQGLIDLAEQAKPR VMFEDFRNAPEAHPLTTPSGRIEIFSETIASFNLPDCKGHPAWFEPREWLGTAGPGMLHLLTDQPARKLHSQLDASPYSA AGKVNGRECIYMNPADAETRGLSQNDTVEVWNRRGRCLASVSITDEIMQGVVRISTGAWYDPDERGCDLHGNPNVLTLDI GTSSLGQGCAAQTCLVSLRGPLRNAPEPNPFRRPQLVP
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=738, Percent_Identity=41.4634146341463, Blast_Score=547, Evalue=1e-157, Organism=Escherichia coli, GI145693196, Length=724, Percent_Identity=41.8508287292818, Blast_Score=541, Evalue=1e-155, Organism=Escherichia coli, GI1787231, Length=767, Percent_Identity=39.1134289439374, Blast_Score=474, Evalue=1e-135, Organism=Escherichia coli, GI87081797, Length=752, Percent_Identity=31.5159574468085, Blast_Score=302, Evalue=5e-83, Organism=Escherichia coli, GI1787870, Length=721, Percent_Identity=29.2649098474341, Blast_Score=266, Evalue=3e-72, Organism=Escherichia coli, GI171474008, Length=715, Percent_Identity=29.6503496503496, Blast_Score=248, Evalue=1e-66, Organism=Escherichia coli, GI3868721, Length=685, Percent_Identity=23.0656934306569, Blast_Score=117, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.7.2.3 [C]
Molecular weight: Translated: 84308; Mature: 84177
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYTVSHWGIYEYDETEEAPRLRPLRSDPDPSMIGLYQLDPKLLESRIKRPSIRRSWLQ CCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHH HGPGAHPELRGKEPFVEVEWELALDLISAELKRVKREYGNSAIFGGSYGWASAGRFHHAQ CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHH SQVHRFLNCIGGYVRHTGSYSLGAAHVILPHIAGTVADLSAEHTTWDVLAEHTELFVTFG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEC GVPTKNAQSSPGGAGHHRVGPGLKAMAEKGVRFVNIGPCNDNIAAECKAEWIRCRPNSDV CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHCHHHEEECCCCCH ALMLALAWQLVEDDAHDQAFLRRYTVGFEKFLPYLLGDDDGVAKTPAWAAELTGVQADRI HHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHH VSLARQMARSRTMVNIAWSLQRAHHGEQAFWMAITLAAMIGQIGLPGGGFGVGYGPMNAN HHHHHHHHHHCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GSPHRRLSGPTLSQGRNAVQDYIPCARIADMLLNPGATFEHDGALRTYPDIQLIYWAGGN CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCC PYHHHQDLNRLNRAWQKPQTIIVHDPFWTASAKRADIALPVTTAMERNDIGYATQEGFLV CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHH AMRQIVEPFGDARSDYQIFASLANRMGVGEQFTEGRDDQAWLSHIYEETREHWLREGIKC HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC PDFETFWEQGLIDLAEQAKPRVMFEDFRNAPEAHPLTTPSGRIEIFSETIASFNLPDCKG CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCC HPAWFEPREWLGTAGPGMLHLLTDQPARKLHSQLDASPYSAAGKVNGRECIYMNPADAET CCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHH RGLSQNDTVEVWNRRGRCLASVSITDEIMQGVVRISTGAWYDPDERGCDLHGNPNVLTLD CCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE IGTSSLGQGCAAQTCLVSLRGPLRNAPEPNPFRRPQLVP CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRYTVSHWGIYEYDETEEAPRLRPLRSDPDPSMIGLYQLDPKLLESRIKRPSIRRSWLQ CCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHH HGPGAHPELRGKEPFVEVEWELALDLISAELKRVKREYGNSAIFGGSYGWASAGRFHHAQ CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHH SQVHRFLNCIGGYVRHTGSYSLGAAHVILPHIAGTVADLSAEHTTWDVLAEHTELFVTFG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEC GVPTKNAQSSPGGAGHHRVGPGLKAMAEKGVRFVNIGPCNDNIAAECKAEWIRCRPNSDV CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHCHHHEEECCCCCH ALMLALAWQLVEDDAHDQAFLRRYTVGFEKFLPYLLGDDDGVAKTPAWAAELTGVQADRI HHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHH VSLARQMARSRTMVNIAWSLQRAHHGEQAFWMAITLAAMIGQIGLPGGGFGVGYGPMNAN HHHHHHHHHHCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GSPHRRLSGPTLSQGRNAVQDYIPCARIADMLLNPGATFEHDGALRTYPDIQLIYWAGGN CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCC PYHHHQDLNRLNRAWQKPQTIIVHDPFWTASAKRADIALPVTTAMERNDIGYATQEGFLV CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHH AMRQIVEPFGDARSDYQIFASLANRMGVGEQFTEGRDDQAWLSHIYEETREHWLREGIKC HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC PDFETFWEQGLIDLAEQAKPRVMFEDFRNAPEAHPLTTPSGRIEIFSETIASFNLPDCKG CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCC HPAWFEPREWLGTAGPGMLHLLTDQPARKLHSQLDASPYSAAGKVNGRECIYMNPADAET CCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHH RGLSQNDTVEVWNRRGRCLASVSITDEIMQGVVRISTGAWYDPDERGCDLHGNPNVLTLD CCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE IGTSSLGQGCAAQTCLVSLRGPLRNAPEPNPFRRPQLVP CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds) [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]