BacMap

Definition	Mesorhizobium sp. BNC1, complete genome.
Accession	NC_008254
Length	4,412,446

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The map label for this gene is fabG [H]

Identifier: 110635934

GI number: 110635934

Start: 3891856

End: 3892560

Strand: Reverse

Name: fabG [H]

Synonym: Meso_3608

Alternate gene names: 110635934

Gene position: 3892560-3891856 (Counterclockwise)

Preceding gene: 110635935

Following gene: 110635933

Centisome position: 88.22

GC content: 58.87

Gene sequence:

>705_bases
ATGGCTGACGCGAAAGTGGCGATGGTCATCGGCGGCGGCAGCGGCATCGGGGCTGCAGGCGCGCGCCGGCTGGCCGAAGA
CGGGTACTCGGTGGCCATACTTTCCTCTTCCGGAAAAGGAGAGGAACTCGCGAAAGAACTCGGCGGGTTGGGCTTCACGG
GTTCCAACCGCTCTGTGGATGACCTGCAGCGCTTTACATCCACCGTACTCAACAGCTTCGGGCGGATCGATACCGTCGTC
AACAGTGCCGGCCACGGACCAAAAGGGGAACTGCTCGAAATTTCGGACGCCGACTGGCAGCTGGGCATGGAGTTCTATCT
GCTTAACGTTGTGCGCATTGCTCGCCTAGTGACACCGGTAATGCAGGCGCAGAAGTCGGGTTCAATCGTCAATATATCGA
CTTACGCTACGTTCGAACCGGAGGCGGATTTCCCTACATCCGGTGTTTTCCGTTCAGGTCTCGCAGCCTTCGCCAAGCTG
TTCGCAGACAGATATGCGCCCGACAATATACGCATGAACAATGTGCTTCCCGGCTTCGTCGAAAGCCTGCCGGAAAGAGA
GGCACGACGCGCGCGCATTCCAATGGGTCGCTACGGCACGGCGGAGGAGATTGCCGAGCTCATCCTGTTCTTGGCCTCCG
AAAGGTCGAGCTATATCACCGGCCAGAACATTCGCATCGATGGCGGGATCACCCGGTCGGTATGA

Upstream 100 bases:

>100_bases
TTAGCGTGGACGATCAGTCGATGATTGCGACCAGTTTTCCGGAATTCATGGACCTGATGACCGGGCTGGGGGCAGAAATC
GAGGATAGGGATTAACAACT

Downstream 100 bases:

>100_bases
TGGGGGGGCATTTCGTCATCGCCATCGATGGCCCGGCCGCTTCCGGCAAGGGCACGCTCGGGCGCCGTCTGGCGGAGCAT
TTCGGGTTCAGCCACCTCGA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MADAKVAMVIGGGSGIGAAGARRLAEDGYSVAILSSSGKGEELAKELGGLGFTGSNRSVDDLQRFTSTVLNSFGRIDTVV
NSAGHGPKGELLEISDADWQLGMEFYLLNVVRIARLVTPVMQAQKSGSIVNISTYATFEPEADFPTSGVFRSGLAAFAKL
FADRYAPDNIRMNNVLPGFVESLPEREARRARIPMGRYGTAEEIAELILFLASERSSYITGQNIRIDGGITRSV

Sequences:

>Translated_234_residues
MADAKVAMVIGGGSGIGAAGARRLAEDGYSVAILSSSGKGEELAKELGGLGFTGSNRSVDDLQRFTSTVLNSFGRIDTVV
NSAGHGPKGELLEISDADWQLGMEFYLLNVVRIARLVTPVMQAQKSGSIVNISTYATFEPEADFPTSGVFRSGLAAFAKL
FADRYAPDNIRMNNVLPGFVESLPEREARRARIPMGRYGTAEEIAELILFLASERSSYITGQNIRIDGGITRSV
>Mature_233_residues
ADAKVAMVIGGGSGIGAAGARRLAEDGYSVAILSSSGKGEELAKELGGLGFTGSNRSVDDLQRFTSTVLNSFGRIDTVVN
SAGHGPKGELLEISDADWQLGMEFYLLNVVRIARLVTPVMQAQKSGSIVNISTYATFEPEADFPTSGVFRSGLAAFAKLF
ADRYAPDNIRMNNVLPGFVESLPEREARRARIPMGRYGTAEEIAELILFLASERSSYITGQNIRIDGGITRSV

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=30.8641975308642, Blast_Score=110, Evalue=8e-25,
Organism=Homo sapiens, GI40254992, Length=234, Percent_Identity=31.1965811965812, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=29.0697674418605, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI66933014, Length=173, Percent_Identity=34.1040462427746, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=30.0813008130081, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI126723750, Length=246, Percent_Identity=27.6422764227642, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=28.3400809716599, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI126723191, Length=178, Percent_Identity=30.3370786516854, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI4758504, Length=248, Percent_Identity=28.6290322580645, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI59889578, Length=206, Percent_Identity=28.1553398058252, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI7705925, Length=235, Percent_Identity=26.8085106382979, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=31.9148936170213, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI10190704, Length=245, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4504505, Length=233, Percent_Identity=27.8969957081545, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787335, Length=238, Percent_Identity=30.2521008403361, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1789208, Length=241, Percent_Identity=30.7053941908714, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=28.8065843621399, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=33.2, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=25.7261410788382, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=26.0330578512397, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786812, Length=247, Percent_Identity=28.7449392712551, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367365, Length=235, Percent_Identity=29.3617021276596, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=25.390625, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=23.6734693877551, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=31.8548387096774, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=34.8178137651822, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=244, Percent_Identity=26.6393442622951, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=30.9236947791165, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=32.9457364341085, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=241, Percent_Identity=29.4605809128631, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=28.7878787878788, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=28.6821705426357, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=267, Percent_Identity=30.7116104868914, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI72000259, Length=257, Percent_Identity=31.1284046692607, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=260, Percent_Identity=28.8461538461538, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=27.8225806451613, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=30.4182509505703, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=28.1853281853282, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=259, Percent_Identity=28.957528957529, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=28.8461538461538, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=29.6703296703297, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=246, Percent_Identity=27.2357723577236, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=257, Percent_Identity=28.4046692607004, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=27.3076923076923, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=187, Percent_Identity=27.807486631016, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=27.8810408921933, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=255, Percent_Identity=26.2745098039216, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=27.9245283018868, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=32.5102880658436, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI23397609, Length=242, Percent_Identity=34.297520661157, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24639444, Length=240, Percent_Identity=32.0833333333333, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=29.7959183673469, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=29.4354838709677, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=28.6290322580645, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=27.9527559055118, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25002; Mature: 24870

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAKVAMVIGGGSGIGAAGARRLAEDGYSVAILSSSGKGEELAKELGGLGFTGSNRSVD
CCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHH
DLQRFTSTVLNSFGRIDTVVNSAGHGPKGELLEISDADWQLGMEFYLLNVVRIARLVTPV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
MQAQKSGSIVNISTYATFEPEADFPTSGVFRSGLAAFAKLFADRYAPDNIRMNNVLPGFV
HHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHH
ESLPEREARRARIPMGRYGTAEEIAELILFLASERSSYITGQNIRIDGGITRSV
HHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEEECCCCCCCC
>Mature Secondary Structure 
ADAKVAMVIGGGSGIGAAGARRLAEDGYSVAILSSSGKGEELAKELGGLGFTGSNRSVD
CCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHH
DLQRFTSTVLNSFGRIDTVVNSAGHGPKGELLEISDADWQLGMEFYLLNVVRIARLVTPV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
MQAQKSGSIVNISTYATFEPEADFPTSGVFRSGLAAFAKLFADRYAPDNIRMNNVLPGFV
HHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHH
ESLPEREARRARIPMGRYGTAEEIAELILFLASERSSYITGQNIRIDGGITRSV
HHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]