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The map label for this gene is ugpB [C]

Identifier: 110635886

GI number: 110635886

Start: 3832886

End: 3834151

Strand: Reverse

Name: ugpB [C]

Synonym: Meso_3559

Alternate gene names: 110635886

Gene position: 3834151-3832886 (Counterclockwise)

Preceding gene: 110635887

Following gene: 110635885

Centisome position: 86.89

GC content: 58.77

Gene sequence:

>1266_bases
ATGGCCATGTGCAGCAAATTTCTGGGTAGCGTCTCGGCACTGATCGCGGTCGGCTGGACCGGGATAGCGGCAGCTCAGGA
CGTCACGCTGGAATACTGGGTTTATTCAGATTTCGCGCAGGGAGACGCGCTGGCGCTTCAGCAGCAATTCATCAGCGAGT
TCACCGCCAAGCATCCCGGTGTAAAGATCAACATCGTCGGCAAAGGCGACGCGGACCTTACGGCGGGGCAGATCGCCGGC
GCGGCGAGCGGCAACATTCCGGACGTCTTCATGAATGGCATCGGCACCGGCGCCCAACTGGTCGAAGTAGGCGCGCTGGC
CAACATCCATGACAAGTGGATGGCCATGCCGGAGGAATACCGCAGCCAGTTCGACGAAAGCGCAATTAAGAATTGCACGC
CTGAGCCAGGCAAGATGTACTGCCTGCCCTATACCGGCTACGGCTCACTCCTCTTTCGCAACCTGACCGTTCTCGAGAAG
GCGGGCATCGATCCGTCAGTGCCGCCGGCAACCTGGGCGGAATGGCTGGACCAGATGAAGAAGGTCAAAGAAGCGGGGAT
GTACGCCATTCCCGACCAGGCGCTTATCTTCAACTCCATCGCCGAGATGTACGCGATCTCGGGCGACGTCAGCACCTGGG
GTATCGACTGGGAAACCCGCACCACACGAATCGATCCGGACGTTATGGCCGAGGTTCTCCAAAAATTCGTGGACATGGCG
CCGCTTACCTCCGGAACGAGCCGCAACGACCAGGCCACAAAGGACCTGTTCATCACCGACAATCTCGCCTTCCACACCGT
GGGACCGTGGGTCAACCCGACCTATGAGGAAGCCAGCAAGAACGGTAAGCTGAAGTATGACTTCGTCCTCATCCCCGGCG
ATACGCCCGATAAGCACGGCGGCATACAGAATTACGAGATAATCGGCGTGGCTCCAGGCGAGAACTTCGACATCGCCTGG
GAGTTCGCTTCCTACGTGACCGAGAAGGAACAGATGGCGCGCTGGGCGAAGCTCCTGTCTCGCTTCAACTCGAATGTCGC
GGCCATGAACGATCCGGAAGTGTCGGCGCTACCACTGATCTCCAAGTCGGTGGAGGCCGTTAAATACGCCATGGACGTAA
TGCCTCCCTATCTCGTGAAGGCCGCTCCGAGCTGCTACTCCTCAACGGTCGTCGATTACGTTTCCGCCACAGCTGACGGA
GACTATACGCCCGAGGAAGGCGCAAAGGAGATGATCGCGGAACTGAACGACTGCTTGGCCGAATAA

Upstream 100 bases:

>100_bases
CCATTGACTCTTGCCGCCAGATTTTATTTGTTAAGGTGCCTAACATAGAACAACGGCCCCAGAGGAACCTATGTGCGGGC
GTTTCCAAAAGGAGGAGTAA

Downstream 100 bases:

>100_bases
GAGGCGGCGCTGACGCGGCCGGGCACGCCCGGCCGCCCATCCTCAAGGAAAGACGATGCCCTCCTTGCGCAGGCACCTGC
CGCAATACCTGATGATCGCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MAMCSKFLGSVSALIAVGWTGIAAAQDVTLEYWVYSDFAQGDALALQQQFISEFTAKHPGVKINIVGKGDADLTAGQIAG
AASGNIPDVFMNGIGTGAQLVEVGALANIHDKWMAMPEEYRSQFDESAIKNCTPEPGKMYCLPYTGYGSLLFRNLTVLEK
AGIDPSVPPATWAEWLDQMKKVKEAGMYAIPDQALIFNSIAEMYAISGDVSTWGIDWETRTTRIDPDVMAEVLQKFVDMA
PLTSGTSRNDQATKDLFITDNLAFHTVGPWVNPTYEEASKNGKLKYDFVLIPGDTPDKHGGIQNYEIIGVAPGENFDIAW
EFASYVTEKEQMARWAKLLSRFNSNVAAMNDPEVSALPLISKSVEAVKYAMDVMPPYLVKAAPSCYSSTVVDYVSATADG
DYTPEEGAKEMIAELNDCLAE

Sequences:

>Translated_421_residues
MAMCSKFLGSVSALIAVGWTGIAAAQDVTLEYWVYSDFAQGDALALQQQFISEFTAKHPGVKINIVGKGDADLTAGQIAG
AASGNIPDVFMNGIGTGAQLVEVGALANIHDKWMAMPEEYRSQFDESAIKNCTPEPGKMYCLPYTGYGSLLFRNLTVLEK
AGIDPSVPPATWAEWLDQMKKVKEAGMYAIPDQALIFNSIAEMYAISGDVSTWGIDWETRTTRIDPDVMAEVLQKFVDMA
PLTSGTSRNDQATKDLFITDNLAFHTVGPWVNPTYEEASKNGKLKYDFVLIPGDTPDKHGGIQNYEIIGVAPGENFDIAW
EFASYVTEKEQMARWAKLLSRFNSNVAAMNDPEVSALPLISKSVEAVKYAMDVMPPYLVKAAPSCYSSTVVDYVSATADG
DYTPEEGAKEMIAELNDCLAE
>Mature_420_residues
AMCSKFLGSVSALIAVGWTGIAAAQDVTLEYWVYSDFAQGDALALQQQFISEFTAKHPGVKINIVGKGDADLTAGQIAGA
ASGNIPDVFMNGIGTGAQLVEVGALANIHDKWMAMPEEYRSQFDESAIKNCTPEPGKMYCLPYTGYGSLLFRNLTVLEKA
GIDPSVPPATWAEWLDQMKKVKEAGMYAIPDQALIFNSIAEMYAISGDVSTWGIDWETRTTRIDPDVMAEVLQKFVDMAP
LTSGTSRNDQATKDLFITDNLAFHTVGPWVNPTYEEASKNGKLKYDFVLIPGDTPDKHGGIQNYEIIGVAPGENFDIAWE
FASYVTEKEQMARWAKLLSRFNSNVAAMNDPEVSALPLISKSVEAVKYAMDVMPPYLVKAAPSCYSSTVVDYVSATADGD
YTPEEGAKEMIAELNDCLAE

Specific function: Sn-Glycerol-3-Phosphate And Glycerophosphoryl Diester- Binding Protein Interacts With The Binding Protein-Dependent Transport System Ugpace. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45842; Mature: 45711

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMCSKFLGSVSALIAVGWTGIAAAQDVTLEYWVYSDFAQGDALALQQQFISEFTAKHPG
CCHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
VKINIVGKGDADLTAGQIAGAASGNIPDVFMNGIGTGAQLVEVGALANIHDKWMAMPEEY
EEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
RSQFDESAIKNCTPEPGKMYCLPYTGYGSLLFRNLTVLEKAGIDPSVPPATWAEWLDQMK
HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KVKEAGMYAIPDQALIFNSIAEMYAISGDVSTWGIDWETRTTRIDPDVMAEVLQKFVDMA
HHHHCCCEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
PLTSGTSRNDQATKDLFITDNLAFHTVGPWVNPTYEEASKNGKLKYDFVLIPGDTPDKHG
CCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCC
GIQNYEIIGVAPGENFDIAWEFASYVTEKEQMARWAKLLSRFNSNVAAMNDPEVSALPLI
CCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHH
SKSVEAVKYAMDVMPPYLVKAAPSCYSSTVVDYVSATADGDYTPEEGAKEMIAELNDCLA
HHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
E
C
>Mature Secondary Structure 
AMCSKFLGSVSALIAVGWTGIAAAQDVTLEYWVYSDFAQGDALALQQQFISEFTAKHPG
CHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
VKINIVGKGDADLTAGQIAGAASGNIPDVFMNGIGTGAQLVEVGALANIHDKWMAMPEEY
EEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
RSQFDESAIKNCTPEPGKMYCLPYTGYGSLLFRNLTVLEKAGIDPSVPPATWAEWLDQMK
HHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KVKEAGMYAIPDQALIFNSIAEMYAISGDVSTWGIDWETRTTRIDPDVMAEVLQKFVDMA
HHHHCCCEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
PLTSGTSRNDQATKDLFITDNLAFHTVGPWVNPTYEEASKNGKLKYDFVLIPGDTPDKHG
CCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCC
GIQNYEIIGVAPGENFDIAWEFASYVTEKEQMARWAKLLSRFNSNVAAMNDPEVSALPLI
CCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHH
SKSVEAVKYAMDVMPPYLVKAAPSCYSSTVVDYVSATADGDYTPEEGAKEMIAELNDCLA
HHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA