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The map label for this gene is yurN [H]

Identifier: 110635885

GI number: 110635885

Start: 3831943

End: 3832830

Strand: Reverse

Name: yurN [H]

Synonym: Meso_3558

Alternate gene names: 110635885

Gene position: 3832830-3831943 (Counterclockwise)

Preceding gene: 110635886

Following gene: 110635884

Centisome position: 86.86

GC content: 59.35

Gene sequence:

>888_bases
ATGCCCTCCTTGCGCAGGCACCTGCCGCAATACCTGATGATCGCACCCTTCGTTGTGCTGTTCGTGGCCTTCTTCCTGTA
TCCGATCGTGAGCGGCTTCTACTACAGCTTTCACGACTGGAACGGGGTCGACGCACCGCGTTTCATCGGGCTTGCAAATT
ACGAGAAGCTTCTCGGATCGCGCGATTTCGGTCGCGCGATGGGAAATCTCGCGACTTACATATCGATCACGGTTCCACTT
GGCATCCTCGTGGCTTTCGGGCTCGCCCTGCTGGTCGACAGCTTTACCGGGCGTTGGGCGAGCTTCTTCCGCAACGCGTA
TTTCGTCCCGGTGGTACTGCCCGCCTTTCTGGCGGCGACGATCTGGCGCTGGATCTACGCTCCGAACTTCGGCCTTCTCA
ACATGATCCTCGGCTGGTTCGGCATCCCGTCTATAAACTTTCTGAACGACACCGACTCGATGATCTACGCGCTCATCGCC
GTCGATGTCTGGGTTTCGGCCGGCTTCAACATGGTCATCTTCCTGGCCGGCTTGAAGAACATACCGGGCGAACTCTATGA
AGCTGCCCGGCTTGACGGCGCCAACAAGTGGCAGCAGATCGTCCATATCACAGTGCCGATGCTGGGCCCGGTCATGTTCT
TCGTGATCACCTACAGCATCATCTCGGCCATGCAGGTTTTCGACAAGCCGTGGCTACTTACCGGCTCGTCCTTTGCCGAA
TATGGCGGCCGCCGCGGCGCGCTGCTCTTCCCCGTGATGGACATGATGGGGCGCGCCTTCGGGGAGGTCCACTTTGGGGA
GGCGGCAGCATATGGCTTCCTGCTGACCGTCGCGATCATCCTTCTCACGCTGGCCTCCTTCGCGGTTCGCAAGTGGAGGC
GCTCATGA

Upstream 100 bases:

>100_bases
GCAAAGGAGATGATCGCGGAACTGAACGACTGCTTGGCCGAATAAGAGGCGGCGCTGACGCGGCCGGGCACGCCCGGCCG
CCCATCCTCAAGGAAAGACG

Downstream 100 bases:

>100_bases
CCGCTCCTTCCCGTCCTCGCCTCACCGTCTGGACCGTCCTCAAATGGGCGCTCGCCATCCTGGTCGCAATCATTGCGGTC
TTCCCGGTCTGGTGGATGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPSLRRHLPQYLMIAPFVVLFVAFFLYPIVSGFYYSFHDWNGVDAPRFIGLANYEKLLGSRDFGRAMGNLATYISITVPL
GILVAFGLALLVDSFTGRWASFFRNAYFVPVVLPAFLAATIWRWIYAPNFGLLNMILGWFGIPSINFLNDTDSMIYALIA
VDVWVSAGFNMVIFLAGLKNIPGELYEAARLDGANKWQQIVHITVPMLGPVMFFVITYSIISAMQVFDKPWLLTGSSFAE
YGGRRGALLFPVMDMMGRAFGEVHFGEAAAYGFLLTVAIILLTLASFAVRKWRRS

Sequences:

>Translated_295_residues
MPSLRRHLPQYLMIAPFVVLFVAFFLYPIVSGFYYSFHDWNGVDAPRFIGLANYEKLLGSRDFGRAMGNLATYISITVPL
GILVAFGLALLVDSFTGRWASFFRNAYFVPVVLPAFLAATIWRWIYAPNFGLLNMILGWFGIPSINFLNDTDSMIYALIA
VDVWVSAGFNMVIFLAGLKNIPGELYEAARLDGANKWQQIVHITVPMLGPVMFFVITYSIISAMQVFDKPWLLTGSSFAE
YGGRRGALLFPVMDMMGRAFGEVHFGEAAAYGFLLTVAIILLTLASFAVRKWRRS
>Mature_294_residues
PSLRRHLPQYLMIAPFVVLFVAFFLYPIVSGFYYSFHDWNGVDAPRFIGLANYEKLLGSRDFGRAMGNLATYISITVPLG
ILVAFGLALLVDSFTGRWASFFRNAYFVPVVLPAFLAATIWRWIYAPNFGLLNMILGWFGIPSINFLNDTDSMIYALIAV
DVWVSAGFNMVIFLAGLKNIPGELYEAARLDGANKWQQIVHITVPMLGPVMFFVITYSIISAMQVFDKPWLLTGSSFAEY
GGRRGALLFPVMDMMGRAFGEVHFGEAAAYGFLLTVAIILLTLASFAVRKWRRS

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=288, Percent_Identity=25.3472222222222, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790465, Length=134, Percent_Identity=33.5820895522388, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787570, Length=271, Percent_Identity=25.0922509225092, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33056; Mature: 32925

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSLRRHLPQYLMIAPFVVLFVAFFLYPIVSGFYYSFHDWNGVDAPRFIGLANYEKLLGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
RDFGRAMGNLATYISITVPLGILVAFGLALLVDSFTGRWASFFRNAYFVPVVLPAFLAAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IWRWIYAPNFGLLNMILGWFGIPSINFLNDTDSMIYALIAVDVWVSAGFNMVIFLAGLKN
HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IPGELYEAARLDGANKWQQIVHITVPMLGPVMFFVITYSIISAMQVFDKPWLLTGSSFAE
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHH
YGGRRGALLFPVMDMMGRAFGEVHFGEAAAYGFLLTVAIILLTLASFAVRKWRRS
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]