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The map label for this gene is cyoA [H]

Identifier: 110635864

GI number: 110635864

Start: 3810395

End: 3811204

Strand: Reverse

Name: cyoA [H]

Synonym: Meso_3536

Alternate gene names: 110635864

Gene position: 3811204-3810395 (Counterclockwise)

Preceding gene: 110635865

Following gene: 110635863

Centisome position: 86.37

GC content: 61.48

Gene sequence:

>810_bases
GTGTTCAGCAGATCTCCGGTGATCGACCCGAAGGGTCCGATCGCATTGGCCGAGCGCGATCTGCTGTTCACCGCGCTCGC
GGTGATGCTGATCGTGGTCATCCCGGTCTTCCTCATGACCTTTCTGTTCGTCACCCGCTACCGCGCCTCCAACAAGAAGG
CGCGTTACGCGCCCGACTGGTCCTTTTCTCCAGCCATCGAAACCGTCGTTTGGGTCGTGCCCGCCCTGATTGTGATCGCG
CTCGGCGTGCTTCTGTGGAATGCCACGCACAAGCTCGATCCATACAGGACGCTTGCCGCCAAGGCCGAACCATTGGAGGT
CCTGGTCATCGCCCAGGATTGGAAATGGCTGTTCATCTATCCCAGCCAGGGCGTGGCAGCGGTCAATGAATTGGTCTTCC
CCAGTGGCAGACCGGTGAATCTCAGGATCACCTCCGACACTGTGATGAATTCCTTCTACGTGCCGGCGCTCGCCGGGCAG
ATCTACGCCATGGCGGGGATCCAGACACGGCTCAATTTCCTGGCCAATGCGCCGGGCACGTTCACGGGCCGCAACACGCA
ATACAGCGGCGACGGCTTCGCCGATCAGCATTTCTCCGTCATGGCCGAAACGCCGGCAGGTTTCGAGGCGTGGCTGCAGC
GGGTCAGGCAATCACCCGGCCGCCTCGACGCGGCAGCGTACGAAAGCCTGGCGAAGCCTAGCATCGGTCATCCCGTTACC
TACTATTCGGGCGTCCAGCCGGGCCTGTTCGAAAGCGTCATTGCAAAATACGCCGCGCATCCCGCTGCCGGCCATTCAGG
CCACGAATAG

Upstream 100 bases:

>100_bases
TCGAGTTTGCGGCAGCGCCGGAATGACAAAGCGGCAGGCGATCTTCAGCCGATCCAGAGGTTTGCTAGCCGCCATCGCGG
CGTTGCCGCTCGGAGGCTGC

Downstream 100 bases:

>100_bases
GGCCGAGGGAGGTCGTTTAATGCTTGGCAAACTGACGATCGACGCGCTGCCCTTCTACAGCTGGGTGGCCATGGGCGGAG
CGGCTGTCACAGTGCTGTGC

Product: ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Ubiquinol oxidase chain B; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MFSRSPVIDPKGPIALAERDLLFTALAVMLIVVIPVFLMTFLFVTRYRASNKKARYAPDWSFSPAIETVVWVVPALIVIA
LGVLLWNATHKLDPYRTLAAKAEPLEVLVIAQDWKWLFIYPSQGVAAVNELVFPSGRPVNLRITSDTVMNSFYVPALAGQ
IYAMAGIQTRLNFLANAPGTFTGRNTQYSGDGFADQHFSVMAETPAGFEAWLQRVRQSPGRLDAAAYESLAKPSIGHPVT
YYSGVQPGLFESVIAKYAAHPAAGHSGHE

Sequences:

>Translated_269_residues
MFSRSPVIDPKGPIALAERDLLFTALAVMLIVVIPVFLMTFLFVTRYRASNKKARYAPDWSFSPAIETVVWVVPALIVIA
LGVLLWNATHKLDPYRTLAAKAEPLEVLVIAQDWKWLFIYPSQGVAAVNELVFPSGRPVNLRITSDTVMNSFYVPALAGQ
IYAMAGIQTRLNFLANAPGTFTGRNTQYSGDGFADQHFSVMAETPAGFEAWLQRVRQSPGRLDAAAYESLAKPSIGHPVT
YYSGVQPGLFESVIAKYAAHPAAGHSGHE
>Mature_269_residues
MFSRSPVIDPKGPIALAERDLLFTALAVMLIVVIPVFLMTFLFVTRYRASNKKARYAPDWSFSPAIETVVWVVPALIVIA
LGVLLWNATHKLDPYRTLAAKAEPLEVLVIAQDWKWLFIYPSQGVAAVNELVFPSGRPVNLRITSDTVMNSFYVPALAGQ
IYAMAGIQTRLNFLANAPGTFTGRNTQYSGDGFADQHFSVMAETPAGFEAWLQRVRQSPGRLDAAAYESLAKPSIGHPVT
YYSGVQPGLFESVIAKYAAHPAAGHSGHE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=278, Percent_Identity=49.6402877697842, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 29455; Mature: 29455

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRSPVIDPKGPIALAERDLLFTALAVMLIVVIPVFLMTFLFVTRYRASNKKARYAPDW
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SFSPAIETVVWVVPALIVIALGVLLWNATHKLDPYRTLAAKAEPLEVLVIAQDWKWLFIY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCCEEEEEEECCCEEEEEE
PSQGVAAVNELVFPSGRPVNLRITSDTVMNSFYVPALAGQIYAMAGIQTRLNFLANAPGT
CCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FTGRNTQYSGDGFADQHFSVMAETPAGFEAWLQRVRQSPGRLDAAAYESLAKPSIGHPVT
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEE
YYSGVQPGLFESVIAKYAAHPAAGHSGHE
EECCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFSRSPVIDPKGPIALAERDLLFTALAVMLIVVIPVFLMTFLFVTRYRASNKKARYAPDW
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SFSPAIETVVWVVPALIVIALGVLLWNATHKLDPYRTLAAKAEPLEVLVIAQDWKWLFIY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCCEEEEEEECCCEEEEEE
PSQGVAAVNELVFPSGRPVNLRITSDTVMNSFYVPALAGQIYAMAGIQTRLNFLANAPGT
CCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FTGRNTQYSGDGFADQHFSVMAETPAGFEAWLQRVRQSPGRLDAAAYESLAKPSIGHPVT
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEE
YYSGVQPGLFESVIAKYAAHPAAGHSGHE
EECCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]