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The map label for this gene is yibP [H]

Identifier: 110635780

GI number: 110635780

Start: 3730083

End: 3731354

Strand: Reverse

Name: yibP [H]

Synonym: Meso_3452

Alternate gene names: 110635780

Gene position: 3731354-3730083 (Counterclockwise)

Preceding gene: 229259626

Following gene: 110635779

Centisome position: 84.56

GC content: 59.36

Gene sequence:

>1272_bases
GTGCCACCGAGCGGCCATGTGGGGCGAGCCCTTTTCCCGGCTCTCGTGCTGGCTGGTTTTCTCGCCACGCCCTGTCTCGC
GCAATCGGTGGACAGCCTCGACTTGAAGCAGAGGGAGAGCGTCGAGGAATTTCGCCGCTTATCGCAGGAGATCTCCCTGT
CAGAAAAGCGGCAGGCCGAAATCGCCGCGGAGATCGCGGCCATCAAAGACGACAGTGCTGCCCTGACCGCCTCCCTCATC
CAAGCGGTCAAGACCGAGAGAAAGCTCGGCGAAGATATCGCTGAGATTGATCGGCGGCTGCAGAACCTTGGGATCCAGGA
GCAGAAGATCAGGCTTTCGCTCGCCAGCCGCAGGGGCACGCTGGCCGAAGTGCTCGGCGCATTGCAGCGCATGGGGCTGA
ACCCGCCGCCTGCGATTCTCGTTCGTCCGGAGGATGCGCTTGCCTCTGTTCGCAGCGCCATTCTGCTCGGCGCCGTAGTG
CCGGAGCTGCGGTCGGAGACGGAAATGCTCATTGCCGATCTGGATGACCTTACGCGTGTGAAGACTTCGATCGAGGTGGA
AGAGGAAAATCTTCAGCAGAAACAAACGGAACAGGCTGAAGAAAAGGAGCGGTTGAAGCTCTTGCTCGAGGAAAAACGGC
GCGTTCAGGCGGTGGCGGAAATGCGCATGGCGGCCGAGCGAGAGCAAGCGGCTGAACTGGCCGAGCGCGCTACGAATCTA
CAGGAGTTGATCGCCTCCCTCGAAAAGGAGATCGAGTCTCTTAGCAAGGTGCTTGAAGCCCGGAAGCAGGCAAACGAAGG
CGATCTGCTGTCGGAGGCTCTGCCCTTTGCGAAGCGAGCAGGTCTCGTCCCATTGCCGGTTTCCGGTCAGTTTGCCAAGC
GCTTCGGCGAGGACGACGGAGCCGGAAGCAGCCTGAAAGGTGACATTCTAAGAACACAATCAGGCGCAATCGTCACCGCT
CCAGTGGATGGAACGGTGCTCTATGCGGGGCCTTTCCGGTCGTATGGTCAGCTATTGATACTGAACCCGGGCGATGGTTA
TCATATCGTGCTGGCAGGGCTGGACCGGCTGAACGTATCGCTTGGGCAATCCGTCCTAGCTGGGGAGCCGGTAGGAATGA
TGGGCGAGGCGCGCCTGGCAAGTATTGCGGCTTCAACATTGGATGGCGCGGTGCCGGAACTATATGTAGAATTCAGGAAA
GACGGGAAACCGATAGACCCGAAGCTCTGGTGGGTTCGGGAATTCTCTGGAAGGACGGGAAATGATTCGTAA

Upstream 100 bases:

>100_bases
CTGTGTCAAATGTGATTGAAGCAGCGCCTCTGCATGGTTGATGCTTCGTTAACGATCTATTTTTAGGGTTGTGTGAGATT
CTTGCGATGGAGAGGTGAAG

Downstream 100 bases:

>100_bases
ATTGTCGCTCTTGTTCGCCGGTGCGTTGATGGGCGCATCCGCCATGAGCCTCGTCTACGGGACGAATGGCACGGCAGCGA
TCGCGGCGGACACCGACACA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MPPSGHVGRALFPALVLAGFLATPCLAQSVDSLDLKQRESVEEFRRLSQEISLSEKRQAEIAAEIAAIKDDSAALTASLI
QAVKTERKLGEDIAEIDRRLQNLGIQEQKIRLSLASRRGTLAEVLGALQRMGLNPPPAILVRPEDALASVRSAILLGAVV
PELRSETEMLIADLDDLTRVKTSIEVEEENLQQKQTEQAEEKERLKLLLEEKRRVQAVAEMRMAAEREQAAELAERATNL
QELIASLEKEIESLSKVLEARKQANEGDLLSEALPFAKRAGLVPLPVSGQFAKRFGEDDGAGSSLKGDILRTQSGAIVTA
PVDGTVLYAGPFRSYGQLLILNPGDGYHIVLAGLDRLNVSLGQSVLAGEPVGMMGEARLASIAASTLDGAVPELYVEFRK
DGKPIDPKLWWVREFSGRTGNDS

Sequences:

>Translated_423_residues
MPPSGHVGRALFPALVLAGFLATPCLAQSVDSLDLKQRESVEEFRRLSQEISLSEKRQAEIAAEIAAIKDDSAALTASLI
QAVKTERKLGEDIAEIDRRLQNLGIQEQKIRLSLASRRGTLAEVLGALQRMGLNPPPAILVRPEDALASVRSAILLGAVV
PELRSETEMLIADLDDLTRVKTSIEVEEENLQQKQTEQAEEKERLKLLLEEKRRVQAVAEMRMAAEREQAAELAERATNL
QELIASLEKEIESLSKVLEARKQANEGDLLSEALPFAKRAGLVPLPVSGQFAKRFGEDDGAGSSLKGDILRTQSGAIVTA
PVDGTVLYAGPFRSYGQLLILNPGDGYHIVLAGLDRLNVSLGQSVLAGEPVGMMGEARLASIAASTLDGAVPELYVEFRK
DGKPIDPKLWWVREFSGRTGNDS
>Mature_422_residues
PPSGHVGRALFPALVLAGFLATPCLAQSVDSLDLKQRESVEEFRRLSQEISLSEKRQAEIAAEIAAIKDDSAALTASLIQ
AVKTERKLGEDIAEIDRRLQNLGIQEQKIRLSLASRRGTLAEVLGALQRMGLNPPPAILVRPEDALASVRSAILLGAVVP
ELRSETEMLIADLDDLTRVKTSIEVEEENLQQKQTEQAEEKERLKLLLEEKRRVQAVAEMRMAAEREQAAELAERATNLQ
ELIASLEKEIESLSKVLEARKQANEGDLLSEALPFAKRAGLVPLPVSGQFAKRFGEDDGAGSSLKGDILRTQSGAIVTAP
VDGTVLYAGPFRSYGQLLILNPGDGYHIVLAGLDRLNVSLGQSVLAGEPVGMMGEARLASIAASTLDGAVPELYVEFRKD
GKPIDPKLWWVREFSGRTGNDS

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=390, Percent_Identity=22.8205128205128, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 45923; Mature: 45792

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSGHVGRALFPALVLAGFLATPCLAQSVDSLDLKQRESVEEFRRLSQEISLSEKRQAE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHH
IAAEIAAIKDDSAALTASLIQAVKTERKLGEDIAEIDRRLQNLGIQEQKIRLSLASRRGT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
LAEVLGALQRMGLNPPPAILVRPEDALASVRSAILLGAVVPELRSETEMLIADLDDLTRV
HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTSIEVEEENLQQKQTEQAEEKERLKLLLEEKRRVQAVAEMRMAAEREQAAELAERATNL
HHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QELIASLEKEIESLSKVLEARKQANEGDLLSEALPFAKRAGLVPLPVSGQFAKRFGEDDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCC
AGSSLKGDILRTQSGAIVTAPVDGTVLYAGPFRSYGQLLILNPGDGYHIVLAGLDRLNVS
CCCCCCCCCEEECCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEECHHHHHHH
LGQSVLAGEPVGMMGEARLASIAASTLDGAVPELYVEFRKDGKPIDPKLWWVREFSGRTG
HCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
NDS
CCC
>Mature Secondary Structure 
PPSGHVGRALFPALVLAGFLATPCLAQSVDSLDLKQRESVEEFRRLSQEISLSEKRQAE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHH
IAAEIAAIKDDSAALTASLIQAVKTERKLGEDIAEIDRRLQNLGIQEQKIRLSLASRRGT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
LAEVLGALQRMGLNPPPAILVRPEDALASVRSAILLGAVVPELRSETEMLIADLDDLTRV
HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTSIEVEEENLQQKQTEQAEEKERLKLLLEEKRRVQAVAEMRMAAEREQAAELAERATNL
HHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QELIASLEKEIESLSKVLEARKQANEGDLLSEALPFAKRAGLVPLPVSGQFAKRFGEDDG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCC
AGSSLKGDILRTQSGAIVTAPVDGTVLYAGPFRSYGQLLILNPGDGYHIVLAGLDRLNVS
CCCCCCCCCEEECCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEECHHHHHHH
LGQSVLAGEPVGMMGEARLASIAASTLDGAVPELYVEFRKDGKPIDPKLWWVREFSGRTG
HCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
NDS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]