| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635670
Identifier: 110635670
GI number: 110635670
Start: 3614190
End: 3614867
Strand: Reverse
Name: 110635670
Synonym: Meso_3342
Alternate gene names: NA
Gene position: 3614867-3614190 (Counterclockwise)
Preceding gene: 110635672
Following gene: 110635669
Centisome position: 81.92
GC content: 64.16
Gene sequence:
>678_bases ATGAAATTACTTGCCATGAAAAGCGCAACCGCCGCTGTGGCTCTATTTGCGCTTTCCGGCATCGCCGCGGCGCAGACGAT GGCGACGGCGACGACCGACCTGAATGTGCGCGCAGGACCTGGGCCGAACTATGCGGTCGTGGGTGTTATCGGCGCATCGC AGCAGACGACGGTGAACGGCTGCATTCAGGGCAGCAAATGGTGCCAGGTCAGCCATAACGGCGTGCAGGGCTGGGCCTAT TCGGATTATCTGACCGCAACCATGGGCGGCGGCCAGACCGTGGTGCTTACTGAACGGCCGGCCGATGCGGTGCCGACGGT CACTTATGAGACGACGGCCAGCACGGATGGTGCCGGGGCCCTGACCGGCGCCACGACAGGTGCCGTTGCGGGTGCCATTA TCGGCGGTCCCGTAGGCGCTGCCGTCGGCGGCGCGGCCGGTGCCGTGGCAGGTGGCGCAATCGACACAGTCACGCCGCCG GAGCGGGTGGTGAGCTATGTCCGCCAGAACGAGGCCCAGCCCGTTTATCTGGAAGGCGAAGTCGTGGTCGGCGCCCAGCT CCCGGAAACGGTAGCGGTGCAGGAAATACCGGATTACGAGTATCGGTATGTGTATGTGAACAATCAGCCGGTCCTGGTCG AGCCGCAGAGCCGCCGGATCGTCTATGTGATGCGCTAA
Upstream 100 bases:
>100_bases GCACTTGGTTACGATCAAGCGCAACTATCACACAGTGTTGGAACGAAATAGGGATCTCCTCGTTCGTTTGCGCAAGGGAC AGTTACTGAGGAGAATGAAA
Downstream 100 bases:
>100_bases CCGCCTTCCGGGCGCCGCCCTTGAAGGGCGGCGCCGCCTCCTCGTGGCCGAAATGGCCGGCCATCGTGCCGGCAACTTGA CTTTTGCGTGCTTTTCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKLLAMKSATAAVALFALSGIAAAQTMATATTDLNVRAGPGPNYAVVGVIGASQQTTVNGCIQGSKWCQVSHNGVQGWAY SDYLTATMGGGQTVVLTERPADAVPTVTYETTASTDGAGALTGATTGAVAGAIIGGPVGAAVGGAAGAVAGGAIDTVTPP ERVVSYVRQNEAQPVYLEGEVVVGAQLPETVAVQEIPDYEYRYVYVNNQPVLVEPQSRRIVYVMR
Sequences:
>Translated_225_residues MKLLAMKSATAAVALFALSGIAAAQTMATATTDLNVRAGPGPNYAVVGVIGASQQTTVNGCIQGSKWCQVSHNGVQGWAY SDYLTATMGGGQTVVLTERPADAVPTVTYETTASTDGAGALTGATTGAVAGAIIGGPVGAAVGGAAGAVAGGAIDTVTPP ERVVSYVRQNEAQPVYLEGEVVVGAQLPETVAVQEIPDYEYRYVYVNNQPVLVEPQSRRIVYVMR >Mature_225_residues MKLLAMKSATAAVALFALSGIAAAQTMATATTDLNVRAGPGPNYAVVGVIGASQQTTVNGCIQGSKWCQVSHNGVQGWAY SDYLTATMGGGQTVVLTERPADAVPTVTYETTASTDGAGALTGATTGAVAGAIIGGPVGAAVGGAAGAVAGGAIDTVTPP ERVVSYVRQNEAQPVYLEGEVVVGAQLPETVAVQEIPDYEYRYVYVNNQPVLVEPQSRRIVYVMR
Specific function: Unknown
COG id: COG4991
COG function: function code S; Uncharacterized protein with a bacterial SH3 domain homologue
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22936; Mature: 22936
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLAMKSATAAVALFALSGIAAAQTMATATTDLNVRAGPGPNYAVVGVIGASQQTTVNG CEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEE CIQGSKWCQVSHNGVQGWAYSDYLTATMGGGQTVVLTERPADAVPTVTYETTASTDGAGA EECCCEEEEECCCCCCCEEECCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCE LTGATTGAVAGAIIGGPVGAAVGGAAGAVAGGAIDTVTPPERVVSYVRQNEAQPVYLEGE ECCCCHHHHHHHHCCCCHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC VVVGAQLPETVAVQEIPDYEYRYVYVNNQPVLVEPQSRRIVYVMR EEECCCCCCEEEEECCCCCCEEEEEECCCEEEECCCCCEEEEEEC >Mature Secondary Structure MKLLAMKSATAAVALFALSGIAAAQTMATATTDLNVRAGPGPNYAVVGVIGASQQTTVNG CEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEE CIQGSKWCQVSHNGVQGWAYSDYLTATMGGGQTVVLTERPADAVPTVTYETTASTDGAGA EECCCEEEEECCCCCCCEEECCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCE LTGATTGAVAGAIIGGPVGAAVGGAAGAVAGGAIDTVTPPERVVSYVRQNEAQPVYLEGE ECCCCHHHHHHHHCCCCHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC VVVGAQLPETVAVQEIPDYEYRYVYVNNQPVLVEPQSRRIVYVMR EEECCCCCCEEEEECCCCCCEEEEEECCCEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA