| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110635326
Identifier: 110635326
GI number: 110635326
Start: 3264859
End: 3265686
Strand: Reverse
Name: 110635326
Synonym: Meso_2997
Alternate gene names: NA
Gene position: 3265686-3264859 (Counterclockwise)
Preceding gene: 110635327
Following gene: 110635325
Centisome position: 74.01
GC content: 62.92
Gene sequence:
>828_bases TTGAAGGAAACGGCGTTGTGCAGTTTCCTCCGCCGATCAACACCAAAGATCGATGGTTGTCTCGAAAAAGAGAATGGAAT GAGGCCACAACAGCAGAACAGGCGCATGCGCGGACGCGGGAATAACCGGAAGGGGCCCAATCCGCTCACCCGCAGCTATG AAAGCAACGGCCCGGACGTGAAAATCCGAGGCACTGCTCAGCAGATCGCTGATAAATATGCAACGCTTGCCAGGGATGCC CAAAGCTCGGGTGACCGGGTGATGGCGGAAAACTATCTGCAGCACGCCGAGCATTACAACCGCCTCATCGCCGCCGCTAT GGCGCAGGTGCAGCCGCAGCAGAACCTACGCGATTTCCGCGAAGACGATTTGGGTGACGATGAGGAGCGTGAAGAGCGTG AGGAACATGAGGCCCAGGGCTTGCCGAACGGCAATGGCCGGGCTGGCGCTTCCTCGATCAACGACGGATCGGGGCCGCAG CCGGTTATCGACGGAGTTCCCGCCGAAGTCGCGCTCAATCGTGAGATGAACGGCTCGAACGGCCGCGGAAGGGCGAATGG CCGTGGTCACGGTGGAAATGGCGCCAACCGGGGCGCGCGTGAAGGTGCGGCAAATGGCGAAGCCGAAAAGGTGAGCGCCG TGCCGGCCGCTGAAACTCCGGCGCCTGCCGAGGTTCCAGCCAGTGAAGCCGTAGTGGCTGCTGCTCCGGAAAGCGGAGCG GAGGAAGCCCCGAAGCCCCGGCGCACGCGCAGGCCTCGCGCCAAGAAGACCGACGAAGCCGCACAGGCGGAAGCGACGTC TCCCGAGGAAGCCGCTGCCCAGAGCTGA
Upstream 100 bases:
>100_bases CCGACGCATGTGCTTTGTGCGGGGCTTATCGGGCAAGTGAACGAAGAAGCGGGTATTAGCTTTGCGGTCGCCTTCAATGC GGCAGACCGCTAGGGGGTGA
Downstream 100 bases:
>100_bases GTACTTCCCCTAGCTGACTCCAGAAAAACGGCGGGCTTTGCTCGCCGTTTTGTGTTTTGCGGGTGATCTTGAGACGATGC AAAAAAGCTCCCATATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKETALCSFLRRSTPKIDGCLEKENGMRPQQQNRRMRGRGNNRKGPNPLTRSYESNGPDVKIRGTAQQIADKYATLARDA QSSGDRVMAENYLQHAEHYNRLIAAAMAQVQPQQNLRDFREDDLGDDEEREEREEHEAQGLPNGNGRAGASSINDGSGPQ PVIDGVPAEVALNREMNGSNGRGRANGRGHGGNGANRGAREGAANGEAEKVSAVPAAETPAPAEVPASEAVVAAAPESGA EEAPKPRRTRRPRAKKTDEAAQAEATSPEEAAAQS
Sequences:
>Translated_275_residues MKETALCSFLRRSTPKIDGCLEKENGMRPQQQNRRMRGRGNNRKGPNPLTRSYESNGPDVKIRGTAQQIADKYATLARDA QSSGDRVMAENYLQHAEHYNRLIAAAMAQVQPQQNLRDFREDDLGDDEEREEREEHEAQGLPNGNGRAGASSINDGSGPQ PVIDGVPAEVALNREMNGSNGRGRANGRGHGGNGANRGAREGAANGEAEKVSAVPAAETPAPAEVPASEAVVAAAPESGA EEAPKPRRTRRPRAKKTDEAAQAEATSPEEAAAQS >Mature_275_residues MKETALCSFLRRSTPKIDGCLEKENGMRPQQQNRRMRGRGNNRKGPNPLTRSYESNGPDVKIRGTAQQIADKYATLARDA QSSGDRVMAENYLQHAEHYNRLIAAAMAQVQPQQNLRDFREDDLGDDEEREEREEHEAQGLPNGNGRAGASSINDGSGPQ PVIDGVPAEVALNREMNGSNGRGRANGRGHGGNGANRGAREGAANGEAEKVSAVPAAETPAPAEVPASEAVVAAAPESGA EEAPKPRRTRRPRAKKTDEAAQAEATSPEEAAAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29378; Mature: 29378
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETALCSFLRRSTPKIDGCLEKENGMRPQQQNRRMRGRGNNRKGPNPLTRSYESNGPDV CCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCE KIRGTAQQIADKYATLARDAQSSGDRVMAENYLQHAEHYNRLIAAAMAQVQPQQNLRDFR EEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EDDLGDDEEREEREEHEAQGLPNGNGRAGASSINDGSGPQPVIDGVPAEVALNREMNGSN HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCC GRGRANGRGHGGNGANRGAREGAANGEAEKVSAVPAAETPAPAEVPASEAVVAAAPESGA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC EEAPKPRRTRRPRAKKTDEAAQAEATSPEEAAAQS CCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHCCC >Mature Secondary Structure MKETALCSFLRRSTPKIDGCLEKENGMRPQQQNRRMRGRGNNRKGPNPLTRSYESNGPDV CCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCE KIRGTAQQIADKYATLARDAQSSGDRVMAENYLQHAEHYNRLIAAAMAQVQPQQNLRDFR EEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EDDLGDDEEREEREEHEAQGLPNGNGRAGASSINDGSGPQPVIDGVPAEVALNREMNGSN HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCC GRGRANGRGHGGNGANRGAREGAANGEAEKVSAVPAAETPAPAEVPASEAVVAAAPESGA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC EEAPKPRRTRRPRAKKTDEAAQAEATSPEEAAAQS CCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA