BacMap

Definition	Mesorhizobium sp. BNC1, complete genome.
Accession	NC_008254
Length	4,412,446

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The map label for this gene is fabG [H]

Identifier: 110635279

GI number: 110635279

Start: 3209719

End: 3210423

Strand: Reverse

Name: fabG [H]

Synonym: Meso_2950

Alternate gene names: 110635279

Gene position: 3210423-3209719 (Counterclockwise)

Preceding gene: 110635280

Following gene: 110635278

Centisome position: 72.76

GC content: 60.85

Gene sequence:

>705_bases
ATGAATAATCGGCAGATCATCGTCACCGGCGCATCCAAGGGGATCGGCCTTTCCGTCGCCTCTGAGCTCGCGCGGCGTGG
TTACCTGCCGGTCTGCCTTTCGCGCTCAGGCAAGGGGGATGTGGGCAGGCAGGTCATCTGCGACATGACCGACGAGTCTG
CGGTAAGGCGCGCTTTCGCCGAAATCGGCGCGTCAGGTCCGCTCGTGGGGCTCGTCAATAATGCGGGCGTCCATATTCCA
GGCTCGGCCGCCACGGTGACAACAAGGGATTTCGAAAAGACTTTCGCGCTCAACACCACCGCGGTGATGGTCGCCGCGCG
CGAGGTTTTTCCCCATCTGAGGGCCGCGGGCGGTACAATCGTCAATATAGGCTCCTTCTTCGATAAGCTTGGCGTTCCCG
ATAACCTCGCCTACTGCGCCTCGAAGGCCGCGGTTGCCGCGATGACGCGGGTACAGGCGGTGGAGTGGGCCAAATATGGG
ATCCGCGTGATAAACGTCGCGCCTGGCTATATCGAGACCGATCTCAACCGCGAATATCTGTCCCGCGCGAAGGTGCGCAA
CTGGATGGAAGGACGAATTCCAACCGGCGGGCCCGGCAACCCGGAGGACGTTGCCCGGCTCGTCGCGGCATTGTTCAACG
AGGAGATCGGGTTTCTCACGGGTGAAACTATCTATGTCGATGGCGCGCAAGGGATAAACCATTAG

Upstream 100 bases:

>100_bases
CTTCAGATGGAAGCGGAGCTGTCCACGCTGGCATATCGCACCGCTGACGCGGAGGAAGGCATGGCGGCTTTCGAGGAAAA
GCGCCAGGCGGAGTTTAAGG

Downstream 100 bases:

>100_bases
ATGCAACTACTCGAGCAGATAAACGCCGCCCGCAAATGGAACGACGACGAACGCGCCGTCATCGACCAGGTCGAGCGCAT
GGTAGAGAAGGTGATCCGCC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNNRQIIVTGASKGIGLSVASELARRGYLPVCLSRSGKGDVGRQVICDMTDESAVRRAFAEIGASGPLVGLVNNAGVHIP
GSAATVTTRDFEKTFALNTTAVMVAAREVFPHLRAAGGTIVNIGSFFDKLGVPDNLAYCASKAAVAAMTRVQAVEWAKYG
IRVINVAPGYIETDLNREYLSRAKVRNWMEGRIPTGGPGNPEDVARLVAALFNEEIGFLTGETIYVDGAQGINH

Sequences:

>Translated_234_residues
MNNRQIIVTGASKGIGLSVASELARRGYLPVCLSRSGKGDVGRQVICDMTDESAVRRAFAEIGASGPLVGLVNNAGVHIP
GSAATVTTRDFEKTFALNTTAVMVAAREVFPHLRAAGGTIVNIGSFFDKLGVPDNLAYCASKAAVAAMTRVQAVEWAKYG
IRVINVAPGYIETDLNREYLSRAKVRNWMEGRIPTGGPGNPEDVARLVAALFNEEIGFLTGETIYVDGAQGINH
>Mature_234_residues
MNNRQIIVTGASKGIGLSVASELARRGYLPVCLSRSGKGDVGRQVICDMTDESAVRRAFAEIGASGPLVGLVNNAGVHIP
GSAATVTTRDFEKTFALNTTAVMVAAREVFPHLRAAGGTIVNIGSFFDKLGVPDNLAYCASKAAVAAMTRVQAVEWAKYG
IRVINVAPGYIETDLNREYLSRAKVRNWMEGRIPTGGPGNPEDVARLVAALFNEEIGFLTGETIYVDGAQGINH

Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=236, Percent_Identity=32.6271186440678, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI40254992, Length=232, Percent_Identity=31.4655172413793, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI59889578, Length=191, Percent_Identity=32.9842931937173, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI15277342, Length=245, Percent_Identity=30.2040816326531, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=29.2181069958848, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI19923817, Length=249, Percent_Identity=28.5140562248996, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI50726952, Length=207, Percent_Identity=31.8840579710145, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI150247226, Length=202, Percent_Identity=27.2277227722772, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=26.530612244898, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4758504, Length=247, Percent_Identity=29.9595141700405, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI19743808, Length=207, Percent_Identity=28.0193236714976, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI22507405, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1790717, Length=239, Percent_Identity=27.1966527196653, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787335, Length=233, Percent_Identity=31.3304721030043, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=28.9795918367347, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=30.5220883534137, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789208, Length=238, Percent_Identity=29.8319327731092, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI2367365, Length=238, Percent_Identity=30.672268907563, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=31.1284046692607, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788459, Length=240, Percent_Identity=27.9166666666667, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=25.8964143426295, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786701, Length=181, Percent_Identity=30.939226519337, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786812, Length=246, Percent_Identity=27.2357723577236, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=257, Percent_Identity=32.295719844358, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71994604, Length=257, Percent_Identity=29.5719844357977, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=238, Percent_Identity=30.672268907563, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=28.2945736434109, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=27.0588235294118, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=27.7551020408163, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=28.957528957529, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=255, Percent_Identity=29.8039215686275, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=255, Percent_Identity=30.1960784313725, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=28.6821705426357, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=256, Percent_Identity=27.734375, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=255, Percent_Identity=27.843137254902, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=257, Percent_Identity=27.6264591439689, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=251, Percent_Identity=27.4900398406374, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=243, Percent_Identity=29.2181069958848, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=245, Percent_Identity=31.0204081632653, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=251, Percent_Identity=26.6932270916335, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=26.1538461538462, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=27.8225806451613, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=214, Percent_Identity=28.0373831775701, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=26.9662921348315, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=252, Percent_Identity=28.968253968254, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=251, Percent_Identity=25.4980079681275, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=259, Percent_Identity=30.1158301158301, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=122, Percent_Identity=35.2459016393443, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=230, Percent_Identity=29.1304347826087, Blast_Score=66, Evalue=5e-12,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=31.3008130081301, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=31.7460317460317, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=33.0708661417323, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=30.241935483871, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=28.099173553719, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24639444, Length=238, Percent_Identity=28.9915966386555, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=29.3388429752066, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24584752, Length=185, Percent_Identity=31.8918918918919, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24648944, Length=199, Percent_Identity=30.1507537688442, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584748, Length=185, Percent_Identity=31.8918918918919, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161076933, Length=185, Percent_Identity=31.8918918918919, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356301, Length=226, Percent_Identity=28.7610619469027, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24644337, Length=177, Percent_Identity=31.638418079096, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=28.8, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24824; Mature: 24824

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRQIIVTGASKGIGLSVASELARRGYLPVCLSRSGKGDVGRQVICDMTDESAVRRAFA
CCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHH
EIGASGPLVGLVNNAGVHIPGSAATVTTRDFEKTFALNTTAVMVAAREVFPHLRAAGGTI
HHCCCCCEEEEECCCCEECCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCE
VNIGSFFDKLGVPDNLAYCASKAAVAAMTRVQAVEWAKYGIRVINVAPGYIETDLNREYL
EEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEECCCCHHHH
SRAKVRNWMEGRIPTGGPGNPEDVARLVAALFNEEIGFLTGETIYVDGAQGINH
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEEEECCCCCCC
>Mature Secondary Structure
MNNRQIIVTGASKGIGLSVASELARRGYLPVCLSRSGKGDVGRQVICDMTDESAVRRAFA
CCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHH
EIGASGPLVGLVNNAGVHIPGSAATVTTRDFEKTFALNTTAVMVAAREVFPHLRAAGGTI
HHCCCCCEEEEECCCCEECCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCE
VNIGSFFDKLGVPDNLAYCASKAAVAAMTRVQAVEWAKYGIRVINVAPGYIETDLNREYL
EEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEECCCCHHHH
SRAKVRNWMEGRIPTGGPGNPEDVARLVAALFNEEIGFLTGETIYVDGAQGINH
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7623658; 12788972 [H]